Click here to switch to the map view.

The map label for this gene is hcaT [H]

Identifier: 83592992

GI number: 83592992

Start: 1947588

End: 1948775

Strand: Reverse

Name: hcaT [H]

Synonym: Rru_A1657

Alternate gene names: 83592992

Gene position: 1948775-1947588 (Counterclockwise)

Preceding gene: 83592996

Following gene: 83592990

Centisome position: 44.77

GC content: 71.55

Gene sequence:

>1188_bases
ATGGCCCTGCGCCTTTCGCTGCTTTATGCGGCCCTTTTCGCCATCGTCGGCGTCACCTTGCCCTTTTGGCCGCTGTGGCT
GGCCGATCGCGGGCTGGCCCCCACCGAGATCGCCATCGTCGCCGGAGCGGCGATCTGGTCGAAGATCCTGGTCAACCCCC
TCGCCGGCAGCCTGGCCGACGCCTTGGGACGGCGGCGCGCCGTCATGCTCGGGCTGGCTGCGGCCAGTCTGGCGCTCTAT
GGCGCCCTCGCCCTGGTCCAGGGGTTCTGGCCGATCCTGATCCTGGCCGTCGCCGCCTCCAGCCTGTTCACCGCCCTGAT
GCCGCTGACCGAAACCGTCACCCTGGCCGCCCTGCGCTTCGGCGGGCTGGATTACGGCCGGGTGCGGCTGTGGGGATCGG
TCAGCTTCATCGCCCTGGCCATGGGGTTGGGCCCGGTGATCGCCGCCTTTGGCGCCGGGGTGATTTCCTGGACGATCGTC
GCCTTGCTCGGCGTCGTCCTCGCCGTGCTGCCGGGCATGCCCGATCCGCCGGAAGGGCGGCGCGGCGCGACCGGCGGGGC
GCGCTTGGGCGGGGGGCGCTTGCCAAGGGATGGCGGCATGCTCGGGCTGCTGACCAATGGCCGCTTCGTGCTGTTCCTGA
TCTCCGACGGCCTGATCCAGGCCGGCCACGCCACCTATTACGCCCTGGGCAGCGTGCATTGGCACAAGGCCGGCCTGGGC
GAAACCCAGGTCGGGCTGCTGTGGGCCGAAGGGGTGGTCGCCGAGGTTTTGCTGTTCGCCTTTGGCGCGCCGCTGGTCCG
GCTTTGCGGGCCCTTCGGCCTGCTGGGTCTGGCGGCGGCGGCCGGGGTGGCGCGCTGGTCGATCACCGCCTGGACCACCG
ATCCGGCGATCCTGGCGCTGATCCAGCCCCTGCACGGCCTGACCTTCGCCGCCGCCCATCTCGGTTCCATGCACCACATC
ACCCGCAGCATCCCCACCGACCGGGCGGCGCGGGCACAAGCGCTGTATTCGGCGGTCTGCGCCGGGATGATCATGGGGGC
GGCGATGACCCTGGCCGGTCCCGCCTATGCGGCGCTGGGAGGGCGGGCCTTCCTGGTCGATGCCTTATGGTGCGCCCTGG
GGGGACTGGGGATCGGACTGCTGGCGCTGATCGCTCGCCGTGACGGGGCGACCCGCCGGCGGGCGTAA

Upstream 100 bases:

>100_bases
ATACCGCCGGCGTCGGGCAATCAACGGTGGCGCGCAAGTCTTGATAGCGCCGCCCACCCCCCACGCCTTTCGCCTTCTGG
CATCCGGGAGTTCCTGGCCG

Downstream 100 bases:

>100_bases
CCGCCGGGCCGGGGTCCGGGCCCCTACCCGGGCCCGATCAGCCGGGATTAGGCGGCGTCTTCATCCTTGGAGGAGCGGTT
GGAACTGACATAGGCGATCG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MALRLSLLYAALFAIVGVTLPFWPLWLADRGLAPTEIAIVAGAAIWSKILVNPLAGSLADALGRRRAVMLGLAAASLALY
GALALVQGFWPILILAVAASSLFTALMPLTETVTLAALRFGGLDYGRVRLWGSVSFIALAMGLGPVIAAFGAGVISWTIV
ALLGVVLAVLPGMPDPPEGRRGATGGARLGGGRLPRDGGMLGLLTNGRFVLFLISDGLIQAGHATYYALGSVHWHKAGLG
ETQVGLLWAEGVVAEVLLFAFGAPLVRLCGPFGLLGLAAAAGVARWSITAWTTDPAILALIQPLHGLTFAAAHLGSMHHI
TRSIPTDRAARAQALYSAVCAGMIMGAAMTLAGPAYAALGGRAFLVDALWCALGGLGIGLLALIARRDGATRRRA

Sequences:

>Translated_395_residues
MALRLSLLYAALFAIVGVTLPFWPLWLADRGLAPTEIAIVAGAAIWSKILVNPLAGSLADALGRRRAVMLGLAAASLALY
GALALVQGFWPILILAVAASSLFTALMPLTETVTLAALRFGGLDYGRVRLWGSVSFIALAMGLGPVIAAFGAGVISWTIV
ALLGVVLAVLPGMPDPPEGRRGATGGARLGGGRLPRDGGMLGLLTNGRFVLFLISDGLIQAGHATYYALGSVHWHKAGLG
ETQVGLLWAEGVVAEVLLFAFGAPLVRLCGPFGLLGLAAAAGVARWSITAWTTDPAILALIQPLHGLTFAAAHLGSMHHI
TRSIPTDRAARAQALYSAVCAGMIMGAAMTLAGPAYAALGGRAFLVDALWCALGGLGIGLLALIARRDGATRRRA
>Mature_394_residues
ALRLSLLYAALFAIVGVTLPFWPLWLADRGLAPTEIAIVAGAAIWSKILVNPLAGSLADALGRRRAVMLGLAAASLALYG
ALALVQGFWPILILAVAASSLFTALMPLTETVTLAALRFGGLDYGRVRLWGSVSFIALAMGLGPVIAAFGAGVISWTIVA
LLGVVLAVLPGMPDPPEGRRGATGGARLGGGRLPRDGGMLGLLTNGRFVLFLISDGLIQAGHATYYALGSVHWHKAGLGE
TQVGLLWAEGVVAEVLLFAFGAPLVRLCGPFGLLGLAAAAGVARWSITAWTTDPAILALIQPLHGLTFAAAHLGSMHHIT
RSIPTDRAARAQALYSAVCAGMIMGAAMTLAGPAYAALGGRAFLVDALWCALGGLGIGLLALIARRDGATRRRA

Specific function: Probable permease involved in the uptake of 3- phenylpropionic acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacY/rafB permease family. HcaT subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788886, Length=372, Percent_Identity=31.989247311828, Blast_Score=138, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005276 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40643; Mature: 40512

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRLSLLYAALFAIVGVTLPFWPLWLADRGLAPTEIAIVAGAAIWSKILVNPLAGSLAD
CCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGRRRAVMLGLAAASLALYGALALVQGFWPILILAVAASSLFTALMPLTETVTLAALRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLDYGRVRLWGSVSFIALAMGLGPVIAAFGAGVISWTIVALLGVVLAVLPGMPDPPEGR
CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RGATGGARLGGGRLPRDGGMLGLLTNGRFVLFLISDGLIQAGHATYYALGSVHWHKAGLG
CCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCHHEEEECCCEEECCCCC
ETQVGLLWAEGVVAEVLLFAFGAPLVRLCGPFGLLGLAAAAGVARWSITAWTTDPAILAL
CCHHHHEEHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHEEEEEECCCHHHHHH
IQPLHGLTFAAAHLGSMHHITRSIPTDRAARAQALYSAVCAGMIMGAAMTLAGPAYAALG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
GRAFLVDALWCALGGLGIGLLALIARRDGATRRRA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ALRLSLLYAALFAIVGVTLPFWPLWLADRGLAPTEIAIVAGAAIWSKILVNPLAGSLAD
CHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGRRRAVMLGLAAASLALYGALALVQGFWPILILAVAASSLFTALMPLTETVTLAALRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLDYGRVRLWGSVSFIALAMGLGPVIAAFGAGVISWTIVALLGVVLAVLPGMPDPPEGR
CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RGATGGARLGGGRLPRDGGMLGLLTNGRFVLFLISDGLIQAGHATYYALGSVHWHKAGLG
CCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCHHEEEECCCEEECCCCC
ETQVGLLWAEGVVAEVLLFAFGAPLVRLCGPFGLLGLAAAAGVARWSITAWTTDPAILAL
CCHHHHEEHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHEEEEEECCCHHHHHH
IQPLHGLTFAAAHLGSMHHITRSIPTDRAARAQALYSAVCAGMIMGAAMTLAGPAYAALG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
GRAFLVDALWCALGGLGIGLLALIARRDGATRRRA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]