| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592959
Identifier: 83592959
GI number: 83592959
Start: 1917139
End: 1917582
Strand: Direct
Name: 83592959
Synonym: Rru_A1624
Alternate gene names: NA
Gene position: 1917139-1917582 (Clockwise)
Preceding gene: 83592957
Following gene: 83592960
Centisome position: 44.04
GC content: 64.86
Gene sequence:
>444_bases ATGTCGGTCACCAACAAGGTGACAGGCGCGTCAAGCGCCTTCTCGGCGGCCGCCAATACCCGGCTGGGCGAGGGGATTCG CGCCGCCACGGCTTCCCAGTCCTTTGCGCCGGTCCTGGAAATCGCCGCGAGCGCCCAATCGGGCCCCGAGGAAAGCAGCC TGCGCAATAATGACTGGGGCGGAACGGGGGCCGAAGGCGATGTCGGCAAGGATACGTCCTCTCCGCTGCCCAATCTGCCG GTGCGCATGGGCTCGGTGTTGGCCTCCAACAGCTTTGCCCAGATCCTCTTCGACTTTCGCGTGCGCGAGCCCTCGCGCTC GGCCCTGCCGATACGAACCGCCAGCCGCGAGGGGACCGATGTCTATCAGTCCAATATCCGCGTGTTGGCCGCCCGTTTTT CCGGCGAAAAGACGACCGGAACCGTGGTCAACCGGTTCTATTGA
Upstream 100 bases:
>100_bases AAAGGAAAACGGTGGGTTTTTCGTCAAGCCTCTCCTATAGTCGGTATGTGGATAAAGTCATCGTCAGAGACCATCGGGCA AGTGGCAAGGGAGACTAGGG
Downstream 100 bases:
>100_bases GGCCGGACTGTCGACAAAGTCCAGGCGCGCCGCTCTGACAGGGTGAGAGGGGAACCAATCATCGTGTCCCACTCCGCTTC GCAGCGTGAGGGCGATTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSVTNKVTGASSAFSAAANTRLGEGIRAATASQSFAPVLEIAASAQSGPEESSLRNNDWGGTGAEGDVGKDTSSPLPNLP VRMGSVLASNSFAQILFDFRVREPSRSALPIRTASREGTDVYQSNIRVLAARFSGEKTTGTVVNRFY
Sequences:
>Translated_147_residues MSVTNKVTGASSAFSAAANTRLGEGIRAATASQSFAPVLEIAASAQSGPEESSLRNNDWGGTGAEGDVGKDTSSPLPNLP VRMGSVLASNSFAQILFDFRVREPSRSALPIRTASREGTDVYQSNIRVLAARFSGEKTTGTVVNRFY >Mature_146_residues SVTNKVTGASSAFSAAANTRLGEGIRAATASQSFAPVLEIAASAQSGPEESSLRNNDWGGTGAEGDVGKDTSSPLPNLPV RMGSVLASNSFAQILFDFRVREPSRSALPIRTASREGTDVYQSNIRVLAARFSGEKTTGTVVNRFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15416; Mature: 15285
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTNKVTGASSAFSAAANTRLGEGIRAATASQSFAPVLEIAASAQSGPEESSLRNNDWG CCCCCCCCCCCHHHHHHHHCHHCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC GTGAEGDVGKDTSSPLPNLPVRMGSVLASNSFAQILFDFRVREPSRSALPIRTASREGTD CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCH VYQSNIRVLAARFSGEKTTGTVVNRFY HHHHCCEEEEEECCCCCCCCHHHHCCC >Mature Secondary Structure SVTNKVTGASSAFSAAANTRLGEGIRAATASQSFAPVLEIAASAQSGPEESSLRNNDWG CCCCCCCCCCHHHHHHHHCHHCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC GTGAEGDVGKDTSSPLPNLPVRMGSVLASNSFAQILFDFRVREPSRSALPIRTASREGTD CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCH VYQSNIRVLAARFSGEKTTGTVVNRFY HHHHCCEEEEEECCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA