| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83592910
Identifier: 83592910
GI number: 83592910
Start: 1856117
End: 1856668
Strand: Direct
Name: 83592910
Synonym: Rru_A1575
Alternate gene names: NA
Gene position: 1856117-1856668 (Clockwise)
Preceding gene: 83592908
Following gene: 83592911
Centisome position: 42.64
GC content: 66.67
Gene sequence:
>552_bases ATGAATAACGCAACCGAATGTGGCGCGGTTGTACATGCGGAAGGATGGGGTGATTGGCTCCAAGGTCTTGCCCTCGCCCT GGCAATGCTGCTTTGCGGTGGATTGTTTTTCCCCGCCCAGGCCCAGGACCCGACCAACCCCTGGCTGACCCCGAGCCGGC CCAGCCCGGAGGAGCCGCCCTTGCGCAAGGTGCTCAATATCACCGAGAGCGACTGCCGGCGGCTAACCGCCCATTACCCC GAACCGGGGGTGGCCTATGAGGCGGGCCACGATGTCAACGGCCGGCCGGTGGTCGGCGCCGATCTCGAGGATTATTCGGC CCTGACCGGCGGGGTGGAGCGGGGGTTCTCGTTCCAGATCGCCATCGATCCCTTCGCCCAGGCGGGGATGACGCCGCCGG CCGCCTTTCAGTCGCCCTCGATCTATATCGGCCGGCTTGATTACGATGTCGCCTCCGGTCAGGCGATGATGAATGGCCGC CCCTTGGACAACGGCGCCGGCGCCGTCATCGCCCAGGCCTGCCGCGAGCATGGGCGGGGTCGTTCCCGCTGA
Upstream 100 bases:
>100_bases GGAAACCCGGGTTTATTGGCGCCTTCAAAATGGTCATTCGGGGTGTCATGCTCAAAAAATGGGTAGTCGTTCGCCCGGCT TCCAGCAAAGGGGAGGTGAC
Downstream 100 bases:
>100_bases TGCTTTGAGCGCCTTGGAAACCGCACGATCAAGGACTAGAGTGCGCCTTCCTTTCGCCCCGCCGTTTTTGTGACGACCCC TCTCGGATAGAAATCAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MNNATECGAVVHAEGWGDWLQGLALALAMLLCGGLFFPAQAQDPTNPWLTPSRPSPEEPPLRKVLNITESDCRRLTAHYP EPGVAYEAGHDVNGRPVVGADLEDYSALTGGVERGFSFQIAIDPFAQAGMTPPAAFQSPSIYIGRLDYDVASGQAMMNGR PLDNGAGAVIAQACREHGRGRSR
Sequences:
>Translated_183_residues MNNATECGAVVHAEGWGDWLQGLALALAMLLCGGLFFPAQAQDPTNPWLTPSRPSPEEPPLRKVLNITESDCRRLTAHYP EPGVAYEAGHDVNGRPVVGADLEDYSALTGGVERGFSFQIAIDPFAQAGMTPPAAFQSPSIYIGRLDYDVASGQAMMNGR PLDNGAGAVIAQACREHGRGRSR >Mature_183_residues MNNATECGAVVHAEGWGDWLQGLALALAMLLCGGLFFPAQAQDPTNPWLTPSRPSPEEPPLRKVLNITESDCRRLTAHYP EPGVAYEAGHDVNGRPVVGADLEDYSALTGGVERGFSFQIAIDPFAQAGMTPPAAFQSPSIYIGRLDYDVASGQAMMNGR PLDNGAGAVIAQACREHGRGRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19478; Mature: 19478
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNATECGAVVHAEGWGDWLQGLALALAMLLCGGLFFPAQAQDPTNPWLTPSRPSPEEPP CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH LRKVLNITESDCRRLTAHYPEPGVAYEAGHDVNGRPVVGADLEDYSALTGGVERGFSFQI HHHHHCCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEECCCHHHHHHHHHHHHCCCEEEE AIDPFAQAGMTPPAAFQSPSIYIGRLDYDVASGQAMMNGRPLDNGAGAVIAQACREHGRG EECCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCC RSR CCC >Mature Secondary Structure MNNATECGAVVHAEGWGDWLQGLALALAMLLCGGLFFPAQAQDPTNPWLTPSRPSPEEPP CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH LRKVLNITESDCRRLTAHYPEPGVAYEAGHDVNGRPVVGADLEDYSALTGGVERGFSFQI HHHHHCCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEECCCHHHHHHHHHHHHCCCEEEE AIDPFAQAGMTPPAAFQSPSIYIGRLDYDVASGQAMMNGRPLDNGAGAVIAQACREHGRG EECCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCC RSR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA