| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592867
Identifier: 83592867
GI number: 83592867
Start: 1805239
End: 1806150
Strand: Reverse
Name: 83592867
Synonym: Rru_A1532
Alternate gene names: NA
Gene position: 1806150-1805239 (Counterclockwise)
Preceding gene: 83592870
Following gene: 83592863
Centisome position: 41.49
GC content: 68.31
Gene sequence:
>912_bases ATGCCAAGATCCCAAGCCGACAGCGCCCTGGCCGAAGCCGAACGCCATCTTGCGGCCGGCCGCTCCCAGCAAGCCCGCGA GGCCTTCCGCCGCGCCCGCCTGTTCTTCCATCGCTGCGCCGATACCGATGGCGAGGCCATCGTCCTGGTCCGCCTGGGCG AGGCCGAACTGGCCGCCGGCCACCTTGCTTCGGCCAAGGAAGCGCTATCGGACGCGCTGGCGCTGTTGTCCCATGAAACC GACCCCAGCGCCCGGGCCGATGCCCTGCATCTGATGGGATCGCTCAAAAACGCCGAAAAAAACGCCCCCGAACGCGACCG CCTGTGGGCGGAGGCGGTGTCGGCCCACCGCGACCACGGCAATAAGGCCGGCGAGGCCCGGGTCTTGCGCGATCAGGCCC AGGTGGCCAAGGCCACGGGCAAGGACGATCTGGCCTTTGACCTGTTCAGCCGGGCCCATCGCCTGTACGCCGACTTGGGG CATTCCTTCCACGAGGCGATGATCCTGCTTGAAATCGGCCAGCTTCACCGCGCCCAGGGCCGGGCCGATCTCGCCCATGA CGCCCTGGAACGCGCCGCCGACTTGTTCCGTGTCAATGGCGACACCCTCGACGAGGGGCGAACCCGCCTGACCCTGGCCC GGTTGTTGCGCGATCTGGGCGACAAGGAAACCGCCCTGCGCGATCTGACGCTTTGCGCCAAGCTGTTTGGCGCCAACGGC CACCTTGGCGGTCAGGCCGAAGCCCTGATCGATCTCGCCCGGCTGGAAGCGGCCAAAGCCCCCAAGGCGGCGCTGAAGAT GCTTCATCAGGCGCGCGCCCTGGCCGCGCGCAGCGGCATCCCCAGCCTTCAGACCCAGGCCGCCAGCGAAATCGCCCGCC TCGATCAGGCCGCGCTCAAAGACACTCCCTAA
Upstream 100 bases:
>100_bases GGCACAGATAAAATAATAATAAGGCCTTACGGTCGATTAAGTCCCCAATGGCTCCCCGATCATGGCCACCACGGACCGAT CCCGCAAGAGGAGGTGACGG
Downstream 100 bases:
>100_bases GCCTAAAGAGCCGCTCCGCCAGCAAAAGGCGGGGATCATCCCCGCCCTTGGATCAAATGCGGAAATACTTGGCCTGGGGA TGGAGCAGGACAAGGGCCGA
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MPRSQADSALAEAERHLAAGRSQQAREAFRRARLFFHRCADTDGEAIVLVRLGEAELAAGHLASAKEALSDALALLSHET DPSARADALHLMGSLKNAEKNAPERDRLWAEAVSAHRDHGNKAGEARVLRDQAQVAKATGKDDLAFDLFSRAHRLYADLG HSFHEAMILLEIGQLHRAQGRADLAHDALERAADLFRVNGDTLDEGRTRLTLARLLRDLGDKETALRDLTLCAKLFGANG HLGGQAEALIDLARLEAAKAPKAALKMLHQARALAARSGIPSLQTQAASEIARLDQAALKDTP
Sequences:
>Translated_303_residues MPRSQADSALAEAERHLAAGRSQQAREAFRRARLFFHRCADTDGEAIVLVRLGEAELAAGHLASAKEALSDALALLSHET DPSARADALHLMGSLKNAEKNAPERDRLWAEAVSAHRDHGNKAGEARVLRDQAQVAKATGKDDLAFDLFSRAHRLYADLG HSFHEAMILLEIGQLHRAQGRADLAHDALERAADLFRVNGDTLDEGRTRLTLARLLRDLGDKETALRDLTLCAKLFGANG HLGGQAEALIDLARLEAAKAPKAALKMLHQARALAARSGIPSLQTQAASEIARLDQAALKDTP >Mature_302_residues PRSQADSALAEAERHLAAGRSQQAREAFRRARLFFHRCADTDGEAIVLVRLGEAELAAGHLASAKEALSDALALLSHETD PSARADALHLMGSLKNAEKNAPERDRLWAEAVSAHRDHGNKAGEARVLRDQAQVAKATGKDDLAFDLFSRAHRLYADLGH SFHEAMILLEIGQLHRAQGRADLAHDALERAADLFRVNGDTLDEGRTRLTLARLLRDLGDKETALRDLTLCAKLFGANGH LGGQAEALIDLARLEAAKAPKAALKMLHQARALAARSGIPSLQTQAASEIARLDQAALKDTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32726; Mature: 32595
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00436 PEROXIDASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSQADSALAEAERHLAAGRSQQAREAFRRARLFFHRCADTDGEAIVLVRLGEAELAAG CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHH HLASAKEALSDALALLSHETDPSARADALHLMGSLKNAEKNAPERDRLWAEAVSAHRDHG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC NKAGEARVLRDQAQVAKATGKDDLAFDLFSRAHRLYADLGHSFHEAMILLEIGQLHRAQG CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RADLAHDALERAADLFRVNGDTLDEGRTRLTLARLLRDLGDKETALRDLTLCAKLFGANG CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC HLGGQAEALIDLARLEAAKAPKAALKMLHQARALAARSGIPSLQTQAASEIARLDQAALK CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC DTP CCC >Mature Secondary Structure PRSQADSALAEAERHLAAGRSQQAREAFRRARLFFHRCADTDGEAIVLVRLGEAELAAG CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHH HLASAKEALSDALALLSHETDPSARADALHLMGSLKNAEKNAPERDRLWAEAVSAHRDHG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC NKAGEARVLRDQAQVAKATGKDDLAFDLFSRAHRLYADLGHSFHEAMILLEIGQLHRAQG CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RADLAHDALERAADLFRVNGDTLDEGRTRLTLARLLRDLGDKETALRDLTLCAKLFGANG CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC HLGGQAEALIDLARLEAAKAPKAALKMLHQARALAARSGIPSLQTQAASEIARLDQAALK CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC DTP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA