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The map label for this gene is osmY [H]

Identifier: 83592837

GI number: 83592837

Start: 1776023

End: 1776337

Strand: Direct

Name: osmY [H]

Synonym: Rru_A1501

Alternate gene names: 83592837

Gene position: 1776023-1776337 (Clockwise)

Preceding gene: 83592836

Following gene: 83592838

Centisome position: 40.8

GC content: 59.68

Gene sequence:

>315_bases
ATGAATAAGCTTCTCAAAGCCACCCTGGTCGCTTTCGCCTTGACCTCGGCGGTCGGCGTCAGCGCCTGTGCCCAGTCGGG
AAAGAGCCAGAGCACCGGCGCTTACATCGACGACGCGGCGATTACCACCAAGGTGAAGGCGGCCATCCTTGATGACGAGA
TGCTCAAGGTGATGGAAATCAAGGTTTCGACCTATCAGCAGGTCGTTCAGCTGAGCGGCTTCGTCGAGAAGCCGGCGATG
GTTGAGCGCGCGGGCAGGGTGGCCCGTGGGGTCGAAGGCGTGAAGGCGGTGAAGAACGATCTTCACGTGAAGTAA

Upstream 100 bases:

>100_bases
TGTTCTGATTATCATCATTATTTTGCTTTTGATGGGTCGTATCTAACTTAGGCGTCCATCCTTGCTGAGTTTAACTTTCT
AACATTTCGGAGAGACTTCG

Downstream 100 bases:

>100_bases
CCCCGCGCGCGGGCGGACTCCCCCCCTCTCTCCGTTCGCGCCCACGTTCCTTAAGTTAAGAATGGAGAGTAACCATGAAA
CGCGCATTTATCGCCCTTTC

Product: transport-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNKLLKATLVAFALTSAVGVSACAQSGKSQSTGAYIDDAAITTKVKAAILDDEMLKVMEIKVSTYQQVVQLSGFVEKPAM
VERAGRVARGVEGVKAVKNDLHVK

Sequences:

>Translated_104_residues
MNKLLKATLVAFALTSAVGVSACAQSGKSQSTGAYIDDAAITTKVKAAILDDEMLKVMEIKVSTYQQVVQLSGFVEKPAM
VERAGRVARGVEGVKAVKNDLHVK
>Mature_104_residues
MNKLLKATLVAFALTSAVGVSACAQSGKSQSTGAYIDDAAITTKVKAAILDDEMLKVMEIKVSTYQQVVQLSGFVEKPAM
VERAGRVARGVEGVKAVKNDLHVK

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1790836, Length=120, Percent_Identity=42.5, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 10996; Mature: 10996

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLLKATLVAFALTSAVGVSACAQSGKSQSTGAYIDDAAITTKVKAAILDDEMLKVMEI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHH
KVSTYQQVVQLSGFVEKPAMVERAGRVARGVEGVKAVKNDLHVK
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKLLKATLVAFALTSAVGVSACAQSGKSQSTGAYIDDAAITTKVKAAILDDEMLKVMEI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHH
KVSTYQQVVQLSGFVEKPAMVERAGRVARGVEGVKAVKNDLHVK
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]