| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83592835
Identifier: 83592835
GI number: 83592835
Start: 1770045
End: 1770608
Strand: Reverse
Name: 83592835
Synonym: Rru_A1499
Alternate gene names: NA
Gene position: 1770608-1770045 (Counterclockwise)
Preceding gene: 83592839
Following gene: 83592834
Centisome position: 40.68
GC content: 61.7
Gene sequence:
>564_bases ATGCAATTCTCATCCAATACGGCGACGCCGCTTCTTCCCAACAAGTCCATTGAAAGCCTCGGCGAGCATCTTTCCTGGGC GATTGAACTACACGCCCAGGTAACCCAGGCGCTTTGGGCCTCGCGCGATCCGGCGCAGATCGTCCTCCACCGGGTTTTGA TAGAAGTCGCCACCGAGATTGAAACCTCGGCCCACCTTATGGCCAGCCGCATCACGGCCCTTGGCGGCGATCCCCGCGAC CCGCTGCAGGTGGAAGCCGATCGGCTGTTCTTGCTGTTCCAGGGGTTCGGCCCCTCCGACATTCGCCAGCAGCTTTTGGC CGTGGCCGCCAGTCTGGCGGCCTTCGGTCACTCCCTGCGCGAGGCGATCCGTCAGGCCGTCAGCATCGACGACGCGCCGA CCGCCCATTTGTTCATCGAACTGTCCCGCGCCATCGACCGCCGCTTCTGGGCCCTCGATTCCCATATTTCTCCCCACGAA AGGAGACGCGAGGATTTGTCCTTCGACCAAGATCAGGACGAGGGTTTCGATCCTCAAAAGCCCGGGGAAAGCCAAAGCCG ATGA
Upstream 100 bases:
>100_bases CGCCTTCTCCCCCGGCCACGTCCTAGCGCTTCGCCACCCGGTGTTCTCTCCTCCCCAAACGCATGGATGGGCTCAATCTG GAACCTAAGGGATCGGGGAA
Downstream 100 bases:
>100_bases AACCGATCACGATCCTGGTCGTCGAAGACGATCCCCAAAGCGGCGTTCTGGTCGCCGCCGTGCTGGAATCGATGATCCCC GAAGGCGATCTTTTTGATCG
Product: Ferritin and Dps
Products: NA
Alternate protein names: Ferritin Dps Family Protein; DNA Protection During Starvation Protein; Ferritin And Dps
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MQFSSNTATPLLPNKSIESLGEHLSWAIELHAQVTQALWASRDPAQIVLHRVLIEVATEIETSAHLMASRITALGGDPRD PLQVEADRLFLLFQGFGPSDIRQQLLAVAASLAAFGHSLREAIRQAVSIDDAPTAHLFIELSRAIDRRFWALDSHISPHE RRREDLSFDQDQDEGFDPQKPGESQSR
Sequences:
>Translated_187_residues MQFSSNTATPLLPNKSIESLGEHLSWAIELHAQVTQALWASRDPAQIVLHRVLIEVATEIETSAHLMASRITALGGDPRD PLQVEADRLFLLFQGFGPSDIRQQLLAVAASLAAFGHSLREAIRQAVSIDDAPTAHLFIELSRAIDRRFWALDSHISPHE RRREDLSFDQDQDEGFDPQKPGESQSR >Mature_187_residues MQFSSNTATPLLPNKSIESLGEHLSWAIELHAQVTQALWASRDPAQIVLHRVLIEVATEIETSAHLMASRITALGGDPRD PLQVEADRLFLLFQGFGPSDIRQQLLAVAASLAAFGHSLREAIRQAVSIDDAPTAHLFIELSRAIDRRFWALDSHISPHE RRREDLSFDQDQDEGFDPQKPGESQSR
Specific function: Unknown
COG id: COG0783
COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20852; Mature: 20852
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFSSNTATPLLPNKSIESLGEHLSWAIELHAQVTQALWASRDPAQIVLHRVLIEVATEI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ETSAHLMASRITALGGDPRDPLQVEADRLFLLFQGFGPSDIRQQLLAVAASLAAFGHSLR HHHHHHHHHHHHHCCCCCCCCCEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH EAIRQAVSIDDAPTAHLFIELSRAIDRRFWALDSHISPHERRREDLSFDQDQDEGFDPQK HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCC PGESQSR CCCCCCC >Mature Secondary Structure MQFSSNTATPLLPNKSIESLGEHLSWAIELHAQVTQALWASRDPAQIVLHRVLIEVATEI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ETSAHLMASRITALGGDPRDPLQVEADRLFLLFQGFGPSDIRQQLLAVAASLAAFGHSLR HHHHHHHHHHHHHCCCCCCCCCEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH EAIRQAVSIDDAPTAHLFIELSRAIDRRFWALDSHISPHERRREDLSFDQDQDEGFDPQK HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCC PGESQSR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA