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The map label for this gene is atoD [H]

Identifier: 83592808

GI number: 83592808

Start: 1738236

End: 1738898

Strand: Reverse

Name: atoD [H]

Synonym: Rru_A1472

Alternate gene names: 83592808

Gene position: 1738898-1738236 (Counterclockwise)

Preceding gene: 83592809

Following gene: 83592807

Centisome position: 39.95

GC content: 64.4

Gene sequence:

>663_bases
ATGTCGAAAATCACCCCCCTGGAGAAAGCCGTCGCCCGCATTCCCGATGGAGCGGTGCTGATGATTGGCGGTTTCATGGG
CGCGGGCACACCGCACCGGCTTATGGATGAACTGGTCCGCCAGGGAAAACGCGACCTGACGGTCATCGCCAATGACACCG
CCCGCCCCACCGTCGGCATCGGCAAGCTGATCGACGCCGGGCTGGTCAGCAAGGTGATCGCCAGCCATATCGGCACCAAT
CCGCAAACCCAGAAACTGATGATCGCCGGGACGATCGAGGTGGCGTTGATTCCCCAGGGCACCCTGGCCGAACAGATCCG
CGCCGGTGGCTTCGGCCTGGGCGGCGTGATCACGCCCACCGGGGTCGGAACCCTGGCCGCCGAGGGCATGCAAACCATCG
AGCTGGCCGGAAAATCCTATCTGATCGCCCTGCCGCTGCGCGCCGATTTCGCCCTGATCAACGCCAAGGCCGCCGATTAC
CGGGGCAATCTGCGCTATGCGATGACCTCGCGGAACTTCAATCCCCTGATGGCGATGGCGGCGGAAACGGTCATCGCCGA
GGCCGAGGACTTCGTGCCCATCGGCGCCATCGAACCCGACGCGGTGGCGACCCCGCATGTTCTGGTCGATGTCCTTATCG
CCAAGGAGCGGTCCCATGGATGA

Upstream 100 bases:

>100_bases
CTTCGGGGGTTCGGAGAGCGAGGGGGCGTCCTTTCCTCTCCCCCCAGCGTGCCCCGGACTTTCCGGACCCCCGTCCCCCT
CCTTTCGAAGGATTTCGACC

Downstream 100 bases:

>100_bases
CAAGACCCTTATCGCCAAGCGCGTCGCCCTGGAACTGCGGCCCGGGGATCTCGCCAATCTCGGCATCGGCCTGCCAACCC
TGGTCGCCTCCTATCTGACC

Product: butyryl-CoA:acetoacetate CoA-transferase subunit alpha

Products: NA

Alternate protein names: Acetyl-CoA:acetoacetate-CoA transferase subunit alpha [H]

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSKITPLEKAVARIPDGAVLMIGGFMGAGTPHRLMDELVRQGKRDLTVIANDTARPTVGIGKLIDAGLVSKVIASHIGTN
PQTQKLMIAGTIEVALIPQGTLAEQIRAGGFGLGGVITPTGVGTLAAEGMQTIELAGKSYLIALPLRADFALINAKAADY
RGNLRYAMTSRNFNPLMAMAAETVIAEAEDFVPIGAIEPDAVATPHVLVDVLIAKERSHG

Sequences:

>Translated_220_residues
MSKITPLEKAVARIPDGAVLMIGGFMGAGTPHRLMDELVRQGKRDLTVIANDTARPTVGIGKLIDAGLVSKVIASHIGTN
PQTQKLMIAGTIEVALIPQGTLAEQIRAGGFGLGGVITPTGVGTLAAEGMQTIELAGKSYLIALPLRADFALINAKAADY
RGNLRYAMTSRNFNPLMAMAAETVIAEAEDFVPIGAIEPDAVATPHVLVDVLIAKERSHG
>Mature_219_residues
SKITPLEKAVARIPDGAVLMIGGFMGAGTPHRLMDELVRQGKRDLTVIANDTARPTVGIGKLIDAGLVSKVIASHIGTNP
QTQKLMIAGTIEVALIPQGTLAEQIRAGGFGLGGVITPTGVGTLAAEGMQTIELAGKSYLIALPLRADFALINAKAADYR
GNLRYAMTSRNFNPLMAMAAETVIAEAEDFVPIGAIEPDAVATPHVLVDVLIAKERSHG

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG1788

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit A family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=230, Percent_Identity=37.3913043478261, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI11545841, Length=230, Percent_Identity=36.5217391304348, Blast_Score=138, Evalue=4e-33,
Organism=Escherichia coli, GI1788551, Length=217, Percent_Identity=52.9953917050691, Blast_Score=234, Evalue=5e-63,
Organism=Escherichia coli, GI1787985, Length=233, Percent_Identity=25.7510729613734, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17531517, Length=226, Percent_Identity=33.6283185840708, Blast_Score=137, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24655794, Length=219, Percent_Identity=38.3561643835616, Blast_Score=153, Evalue=1e-37,
Organism=Drosophila melanogaster, GI21358325, Length=219, Percent_Identity=38.3561643835616, Blast_Score=153, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012792
- InterPro:   IPR004165
- InterPro:   IPR004163 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.8 [H]

Molecular weight: Translated: 22973; Mature: 22842

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS01273 COA_TRANSF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKITPLEKAVARIPDGAVLMIGGFMGAGTPHRLMDELVRQGKRDLTVIANDTARPTVGI
CCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCH
GKLIDAGLVSKVIASHIGTNPQTQKLMIAGTIEVALIPQGTLAEQIRAGGFGLGGVITPT
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCHHHHHHHCCCCCCCCEECCC
GVGTLAAEGMQTIELAGKSYLIALPLRADFALINAKAADYRGNLRYAMTSRNFNPLMAMA
CCHHHHHCCHHEEEECCCEEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHH
AETVIAEAEDFVPIGAIEPDAVATPHVLVDVLIAKERSHG
HHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKITPLEKAVARIPDGAVLMIGGFMGAGTPHRLMDELVRQGKRDLTVIANDTARPTVGI
CCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCH
GKLIDAGLVSKVIASHIGTNPQTQKLMIAGTIEVALIPQGTLAEQIRAGGFGLGGVITPT
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCHHHHHHHCCCCCCCCEECCC
GVGTLAAEGMQTIELAGKSYLIALPLRADFALINAKAADYRGNLRYAMTSRNFNPLMAMA
CCHHHHHCCHHEEEECCCEEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHH
AETVIAEAEDFVPIGAIEPDAVATPHVLVDVLIAKERSHG
HHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]