| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is lutA [H]
Identifier: 83592749
GI number: 83592749
Start: 1670892
End: 1671641
Strand: Reverse
Name: lutA [H]
Synonym: Rru_A1413
Alternate gene names: 83592749
Gene position: 1671641-1670892 (Counterclockwise)
Preceding gene: 83592753
Following gene: 83592748
Centisome position: 38.4
GC content: 64.93
Gene sequence:
>750_bases ATGAGTCGTGATGTTCCCGAAAAACCGGCGTCGGTCTATTTCTTCGCCACCTGTCTGGTCGATCTTTTTTACCCCGAAGC CGGATTGGCGGGGATGACCCTGCTTGAGCGCCAGGGGATCAGGGTGATCTTTCCCCCGGGCCAAACCTGCTGCGGCCAGC CGATGCGCAACAATGGCTGGCTTGACGAGGCCCGCGCCATCGCCCGCCAGCAGATCAAGACCTTCCCCAAGCCGATCCCC ATCGTCGTGCCCTCGGGCAGTTGCGCCGGCATGATGCACCGCCATTATCCCGAGCTGTTCGCCGGCCAGCCCGACGAGGC CGAGGCCAGGGCCTTCGCCGCCCGCGTCTATGAACTGACGTGGTTCCTGGTCCATGTCTGCAAGCTGAGCCTGACCGACG GCGGACCGCCGGTCACCGTGGCCTTCCACGCCTCCTGCCACAGCCAGCGCGAAATGGGCGTGCGCGGCGAACCCGAAAGC CTGCTGGCCGGACTGAGCAATGTCACCCTGGCCAAGCTGGAGCGGCCCAACGAGTGCTGCGGCTTCGGCGGGGCCTTTTC CGTCCGCCAGCCGGAAATCTCCGCCGCCATGGTCGCCGATAAGATCGACGATCTGAGCAAAAGCGGCGCCAGCGAGGTGC TGAGCGGCGATTGCGGCTGCCTGATGAACATCAAAGGGGCGCTGGAAAAGGCCGGCAGACCGCAAAAAGCCCGCCATATC GCCGAATTCCTGGTCGAGCGCGGCCGATGA
Upstream 100 bases:
>100_bases CCTGTGACCAATCGGCCCGCCGCCTTGCGGTTGGGCCGTATCGCATCCGCTTTTGGCATTGGCGCGCCGCACCCCGCCGG CGGCGAGGAAAGGGTTGGCA
Downstream 100 bases:
>100_bases ACGCCCCCCTTCCCCAGGACACCGCCGCCACCGCCCCCTTGGCCTTCACCGGCAAGGCCAGGGTGGCTTTGAACGATCCG CGCCTGCGCGCCAATTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSRDVPEKPASVYFFATCLVDLFYPEAGLAGMTLLERQGIRVIFPPGQTCCGQPMRNNGWLDEARAIARQQIKTFPKPIP IVVPSGSCAGMMHRHYPELFAGQPDEAEARAFAARVYELTWFLVHVCKLSLTDGGPPVTVAFHASCHSQREMGVRGEPES LLAGLSNVTLAKLERPNECCGFGGAFSVRQPEISAAMVADKIDDLSKSGASEVLSGDCGCLMNIKGALEKAGRPQKARHI AEFLVERGR
Sequences:
>Translated_249_residues MSRDVPEKPASVYFFATCLVDLFYPEAGLAGMTLLERQGIRVIFPPGQTCCGQPMRNNGWLDEARAIARQQIKTFPKPIP IVVPSGSCAGMMHRHYPELFAGQPDEAEARAFAARVYELTWFLVHVCKLSLTDGGPPVTVAFHASCHSQREMGVRGEPES LLAGLSNVTLAKLERPNECCGFGGAFSVRQPEISAAMVADKIDDLSKSGASEVLSGDCGCLMNIKGALEKAGRPQKARHI AEFLVERGR >Mature_248_residues SRDVPEKPASVYFFATCLVDLFYPEAGLAGMTLLERQGIRVIFPPGQTCCGQPMRNNGWLDEARAIARQQIKTFPKPIPI VVPSGSCAGMMHRHYPELFAGQPDEAEARAFAARVYELTWFLVHVCKLSLTDGGPPVTVAFHASCHSQREMGVRGEPESL LAGLSNVTLAKLERPNECCGFGGAFSVRQPEISAAMVADKIDDLSKSGASEVLSGDCGCLMNIKGALEKAGRPQKARHIA EFLVERGR
Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source [H]
COG id: COG0247
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutA/ykgE family [H]
Homologues:
Organism=Escherichia coli, GI1786497, Length=241, Percent_Identity=37.344398340249, Blast_Score=155, Evalue=2e-39, Organism=Escherichia coli, GI1788576, Length=214, Percent_Identity=26.6355140186916, Blast_Score=71, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004017 - InterPro: IPR022822 [H]
Pfam domain/function: PF02754 CCG [H]
EC number: NA
Molecular weight: Translated: 27021; Mature: 26890
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDVPEKPASVYFFATCLVDLFYPEAGLAGMTLLERQGIRVIFPPGQTCCGQPMRNNGW CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC LDEARAIARQQIKTFPKPIPIVVPSGSCAGMMHRHYPELFAGQPDEAEARAFAARVYELT HHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHH WFLVHVCKLSLTDGGPPVTVAFHASCHSQREMGVRGEPESLLAGLSNVTLAKLERPNECC HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHH GFGGAFSVRQPEISAAMVADKIDDLSKSGASEVLSGDCGCLMNIKGALEKAGRPQKARHI CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEHHHHHHHHCCCCHHHHHH AEFLVERGR HHHHHHCCC >Mature Secondary Structure SRDVPEKPASVYFFATCLVDLFYPEAGLAGMTLLERQGIRVIFPPGQTCCGQPMRNNGW CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC LDEARAIARQQIKTFPKPIPIVVPSGSCAGMMHRHYPELFAGQPDEAEARAFAARVYELT HHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHH WFLVHVCKLSLTDGGPPVTVAFHASCHSQREMGVRGEPESLLAGLSNVTLAKLERPNECC HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHH GFGGAFSVRQPEISAAMVADKIDDLSKSGASEVLSGDCGCLMNIKGALEKAGRPQKARHI CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEHHHHHHHHCCCCHHHHHH AEFLVERGR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA