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The map label for this gene is aer [C]

Identifier: 83592744

GI number: 83592744

Start: 1662292

End: 1663998

Strand: Reverse

Name: aer [C]

Synonym: Rru_A1408

Alternate gene names: 83592744

Gene position: 1663998-1662292 (Counterclockwise)

Preceding gene: 83592745

Following gene: 83592732

Centisome position: 38.23

GC content: 62.27

Gene sequence:

>1707_bases
ATGGCCCTTCTCGCCAATAGCCGAATCGTAACGAAATTCATTGTTGTTTTCTGCGTCATGGCCGGGATCATGGTGGCTCT
GGCGACCTTGAACGGCATCCAAATAAACAAAATCGACACCGATTATTCCGCCTTGCTGGAAAACGAGGTCATTATCGCGA
CCGAAGCTTTACGGGCGCGCGGCGATATTCAAAACATCGGCCGGCAAATGAACAACGTCCTGTTGATTAGAGAACCGCCC
TCCAATCTCGACAAGATCGCGTCGTCGCTTCTTGATCTGCAGACCCTTATCGCTAAAAGTCTCGACAAGATCGAGCAGAC
CGGCGATGGCAAGGCCGACGCCATGGTCAACGAGGTCCGCGCCATCCTGGAGCGGATCAAAAGAACCAGCGCCGCCACCA
TCGCCGTGAAACGCGCCGCCGCCGCCGATCATGACACGGTGGCCCGGGCGACCTGGGGGGGACCCGATGGCCGGCCGTTG
GTGCTCGGGATTTATGACCGCCTCGAGTCCTTCAGCAACGAGACGCTGACCCGCATCGACACGATTTCGGGTGAGCTAAG
CGCTCAATCCACTAACACCATCTGGTTATCGCGCGCGCTGACCGGCCTTGGTCTGGTGGTCGGCATGGCCTTGAGCTTTT
TCGTCGCCCTGGTGGGCATCGTTCACCCGCTCGCCCGCCTCAGAGAAGCGATGGCGAAAATCGCTCAAGGCGACCTTGCC
GTGGCCATTCCCGGGGTTGAGCGCCGCGACGAGGCCGGGGCGATGGCCGGCGCCGTCATGATCTTCAAGACCAATATGCA
AAAGAACCGCGAGATGGAGGAGGAGGCCAAGCAGACCGACCTGCGGGTGCAAAAAGAGCGCCGCGACGCCATGACCCAAT
TGGCCAATTCCTTCGAATCCCGGGTGATGGACGTGGTGAAGGGCGTCTCGGCCTCCTCGACCGAATTGCAGGCCACCGCC
CAATCGATGTCGCGCTCGGCCAGCCAGTCCAATACGCAGACGACCACCGTCGCCGCCGCCGCTGAACAGGCGACCGCCAA
TGTGCAGACGGTCGCCTCGGCCGCCGAGCAACTCTCGGCGTCGATTTCCGAAATATCGCGTCAGGTTTCGGAATCAACGC
GGATCTCGACGGCGGCTTCGGAAGAGGCCGCCCGCGCCGACGCCATGGTTCAAGGCTTGGCAAGTACCGCCGACCGCATC
GGCGCCGTGGTCAAGCTGATCAACGATATCGCCTCGCAAACCAATTTGCTGGCGCTCAACGCCACCATCGAAGCCGCCCG
CGCCGGCGAGGCCGGCAAGGGATTCGCCGTCGTCGCCGGCGAGGTCAAGGGCTTGGCCAATCAAACCGGCCGGGCGACCG
AGGAGATCGGCCAGCAGATCGCCGCCGTCCAGGAAGAAACCCGCCGCACGGTCGAGGCGATCAAGGGCATCACCACCGTT
ATCGATCAGGTGCGCCAGATTTCCTCGTCCATCGCCTCGGCGGTCGAGGAACAAGGAGCGGCCACCCAGGAAATCGCCCG
CAACGTCCAGCAGGCCGCCCAGGGAACACGCGACGTGTCCCATAATATTATGGGCGTCAGCCAAAGCGTGGCCTCGACCG
GCGGGGCGGCCGAACAACTGCTGGCCTCGGCCAGCGAACTGGCGCGCAATTCCGAAACGCTGAGAAGCGAGGTCGCGCTG
TTCCTCAGCGAGGTGCGCTCGACCTAA

Upstream 100 bases:

>100_bases
GAGCGGGCTCTTGGCCTGTCCCCAATGGGGGGCGGCCAAGCGTTCGGGATAGCTCGGTCAAAATGACGGGATCGGCCCCC
TTGGTAAGGAAAGATCCGTC

Downstream 100 bases:

>100_bases
GGCGCCCCCCGGCCGACGCCCGCCCCCTCACCGCGCCAAGCCCTTGATAGGGAAGCAAATCCTCGTGGTACTCCCCTCCA
GAGCGCTCGGGATTTGCTTT

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 567

Protein sequence:

>568_residues
MALLANSRIVTKFIVVFCVMAGIMVALATLNGIQINKIDTDYSALLENEVIIATEALRARGDIQNIGRQMNNVLLIREPP
SNLDKIASSLLDLQTLIAKSLDKIEQTGDGKADAMVNEVRAILERIKRTSAATIAVKRAAAADHDTVARATWGGPDGRPL
VLGIYDRLESFSNETLTRIDTISGELSAQSTNTIWLSRALTGLGLVVGMALSFFVALVGIVHPLARLREAMAKIAQGDLA
VAIPGVERRDEAGAMAGAVMIFKTNMQKNREMEEEAKQTDLRVQKERRDAMTQLANSFESRVMDVVKGVSASSTELQATA
QSMSRSASQSNTQTTTVAAAAEQATANVQTVASAAEQLSASISEISRQVSESTRISTAASEEAARADAMVQGLASTADRI
GAVVKLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKGLANQTGRATEEIGQQIAAVQEETRRTVEAIKGITTV
IDQVRQISSSIASAVEEQGAATQEIARNVQQAAQGTRDVSHNIMGVSQSVASTGGAAEQLLASASELARNSETLRSEVAL
FLSEVRST

Sequences:

>Translated_568_residues
MALLANSRIVTKFIVVFCVMAGIMVALATLNGIQINKIDTDYSALLENEVIIATEALRARGDIQNIGRQMNNVLLIREPP
SNLDKIASSLLDLQTLIAKSLDKIEQTGDGKADAMVNEVRAILERIKRTSAATIAVKRAAAADHDTVARATWGGPDGRPL
VLGIYDRLESFSNETLTRIDTISGELSAQSTNTIWLSRALTGLGLVVGMALSFFVALVGIVHPLARLREAMAKIAQGDLA
VAIPGVERRDEAGAMAGAVMIFKTNMQKNREMEEEAKQTDLRVQKERRDAMTQLANSFESRVMDVVKGVSASSTELQATA
QSMSRSASQSNTQTTTVAAAAEQATANVQTVASAAEQLSASISEISRQVSESTRISTAASEEAARADAMVQGLASTADRI
GAVVKLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKGLANQTGRATEEIGQQIAAVQEETRRTVEAIKGITTV
IDQVRQISSSIASAVEEQGAATQEIARNVQQAAQGTRDVSHNIMGVSQSVASTGGAAEQLLASASELARNSETLRSEVAL
FLSEVRST
>Mature_567_residues
ALLANSRIVTKFIVVFCVMAGIMVALATLNGIQINKIDTDYSALLENEVIIATEALRARGDIQNIGRQMNNVLLIREPPS
NLDKIASSLLDLQTLIAKSLDKIEQTGDGKADAMVNEVRAILERIKRTSAATIAVKRAAAADHDTVARATWGGPDGRPLV
LGIYDRLESFSNETLTRIDTISGELSAQSTNTIWLSRALTGLGLVVGMALSFFVALVGIVHPLARLREAMAKIAQGDLAV
AIPGVERRDEAGAMAGAVMIFKTNMQKNREMEEEAKQTDLRVQKERRDAMTQLANSFESRVMDVVKGVSASSTELQATAQ
SMSRSASQSNTQTTTVAAAAEQATANVQTVASAAEQLSASISEISRQVSESTRISTAASEEAARADAMVQGLASTADRIG
AVVKLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKGLANQTGRATEEIGQQIAAVQEETRRTVEAIKGITTVI
DQVRQISSSIASAVEEQGAATQEIARNVQQAAQGTRDVSHNIMGVSQSVASTGGAAEQLLASASELARNSETLRSEVALF
LSEVRST

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=245, Percent_Identity=32.6530612244898, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI2367378, Length=353, Percent_Identity=29.4617563739377, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1788194, Length=240, Percent_Identity=35, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788195, Length=189, Percent_Identity=32.2751322751323, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1787690, Length=210, Percent_Identity=31.4285714285714, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 60016; Mature: 59885

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLANSRIVTKFIVVFCVMAGIMVALATLNGIQINKIDTDYSALLENEVIIATEALRAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCEEEEHHHHHHC
GDIQNIGRQMNNVLLIREPPSNLDKIASSLLDLQTLIAKSLDKIEQTGDGKADAMVNEVR
CCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AILERIKRTSAATIAVKRAAAADHDTVARATWGGPDGRPLVLGIYDRLESFSNETLTRID
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEHHHHHHHHCCCHHHHHH
TISGELSAQSTNTIWLSRALTGLGLVVGMALSFFVALVGIVHPLARLREAMAKIAQGDLA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
VAIPGVERRDEAGAMAGAVMIFKTNMQKNREMEEEAKQTDLRVQKERRDAMTQLANSFES
EEECCCCCCHHHHHHHHHHHEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVMDVVKGVSASSTELQATAQSMSRSASQSNTQTTTVAAAAEQATANVQTVASAAEQLSA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SISEISRQVSESTRISTAASEEAARADAMVQGLASTADRIGAVVKLINDIASQTNLLALN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
ATIEAARAGEAGKGFAVVAGEVKGLANQTGRATEEIGQQIAAVQEETRRTVEAIKGITTV
CHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDQVRQISSSIASAVEEQGAATQEIARNVQQAAQGTRDVSHNIMGVSQSVASTGGAAEQL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHH
LASASELARNSETLRSEVALFLSEVRST
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALLANSRIVTKFIVVFCVMAGIMVALATLNGIQINKIDTDYSALLENEVIIATEALRAR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCEEEEHHHHHHC
GDIQNIGRQMNNVLLIREPPSNLDKIASSLLDLQTLIAKSLDKIEQTGDGKADAMVNEVR
CCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AILERIKRTSAATIAVKRAAAADHDTVARATWGGPDGRPLVLGIYDRLESFSNETLTRID
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEHHHHHHHHCCCHHHHHH
TISGELSAQSTNTIWLSRALTGLGLVVGMALSFFVALVGIVHPLARLREAMAKIAQGDLA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
VAIPGVERRDEAGAMAGAVMIFKTNMQKNREMEEEAKQTDLRVQKERRDAMTQLANSFES
EEECCCCCCHHHHHHHHHHHEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVMDVVKGVSASSTELQATAQSMSRSASQSNTQTTTVAAAAEQATANVQTVASAAEQLSA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SISEISRQVSESTRISTAASEEAARADAMVQGLASTADRIGAVVKLINDIASQTNLLALN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
ATIEAARAGEAGKGFAVVAGEVKGLANQTGRATEEIGQQIAAVQEETRRTVEAIKGITTV
CHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDQVRQISSSIASAVEEQGAATQEIARNVQQAAQGTRDVSHNIMGVSQSVASTGGAAEQL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHH
LASASELARNSETLRSEVALFLSEVRST
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA