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The map label for this gene is trg [H]

Identifier: 83592737

GI number: 83592737

Start: 1653542

End: 1655251

Strand: Direct

Name: trg [H]

Synonym: Rru_A1401

Alternate gene names: 83592737

Gene position: 1653542-1655251 (Clockwise)

Preceding gene: 83592736

Following gene: 83592738

Centisome position: 37.99

GC content: 64.15

Gene sequence:

>1710_bases
ATGCGCATTTCGATCAAGTTGAAGCTCGGACTGACCTTCGCCGTCATCATCGCCCTGTCAATGGTCACGGCGGGCCTGGG
GGTCACCAGCCTTGCCGGGCTTGAGGCCAATCTGCGTGGCTTGGTTGATGGGCCGGTCCAGCGTCTGCAAACGGCGGAAA
AGCTGCTGGTCGATGTTCTTCAGGTCATTCGCGCCCAGAAGAACATGATCCTCGCCGTCTCGCCCCAGGAGGCCGCTCAA
CACGAGAAGACCATCCTGGGCCTGCGGCCGCAGATCACCAACATCCTCGATCAGGCGGTGAGCGCCGCCACCCCCGAAGG
CAAGCCGAAATGGGAAGCCTTTCGCGTGGCCTGGGGGGAATTCGCGCTGTTCGACGAAAAGGTCCGCGGCTTCGTCCGCG
CCGGCGAACCCTTGAAAGCCCAGGAACTCTCGGTCAGCGAGGGTCGCCAGATCGTTGGCGATGTCGAAAAGCAAAATATG
GATCTGGTCGACCTGAACCAGACCCAGATGGAGCAGGCCCAGGCGGACGCGACGGCCCAGTATGAAAGCTCCCGTACCTT
TCTGCTGTCGACCATCCTCGTTTCCTTGATCATCGCCGTTGGCGCCGGACTGTGGATTTCCCTGGGGATCAGCCGTGGTT
TGGGCCGGGCTGGTAGCCTAGCCCAGGAGGTCGCCGGGGGCGATCTGACCAAGACCATCGATAACGTGCCGCGCGACGAA
GTCGGTGATCTGATCGGCCATATCAACGCCATGGTGAAGAAACTGCGCGAGGTGGTCGGCGAGGCCAATAGCGCCGCCGA
GAACGTGTCCTCGGGCAGTCAGGAATTGTCGGCGACGGCCGAGGAATTGTCACAGGGCGCCACCGAACAGGCGTCCTCGG
CCGAAGAGGCCTCGGCCTCGATGGAGCAGATGGCGGCCAATATCAAGCAGAACGCCGATAACGCCAGCCAGACCGAGAAG
ATCGCCCGCCAATCCTCGCTCGATGCCCAGGCCAGCGGCGAGGCGGTGACCCGCGCCGTGGTGGCGATGCAGACGATCGC
CGAGAAGATCACCATCGTTCAAGAGATCGCCCGCCAGACCGATCTGCTGGCGCTCAACGCCGCCGTCGAGGCGGCAAGGG
CCGGCGAGCATGGGCGCGGTTTCGCCGTCGTCGCTTCGGAAGTGCGCAAGCTGGCCGAACGCAGTCAGCTGGCGGCGGCC
GAGATTAGCACCATGTCGTCGCAAACCGTGCGCGCTGCCCAGGAGGCCGGAGATATGCTTGGCCGGTTGGTGCCCGATAT
CAGAAAAACCGCCGAATTGGTTTCCGAGATCAGCGCCGCCTGCCGCGAGCAGGATATCGGCGGCGATCAGATCAATCAGG
CGATCCAACAACTTGACAAGGTGACCCAGCAGAACGCCAGCGCCTCGGAGGAAATGTCGGCGACCTCGGAGGAACTGGCC
GCCCAGTCCGAACAGCTTCAGGCCAGCATCTCCTACTTCCGCGTCGACGAGGGCAACGGAGGGACCCGCGCCATGCCGTC
GCGACGGCTGTCCCGTCCCGTCGGCACCGCCCTGGTCAAAAAGCCGGTGGCGCGCGGCGGGCGGGTCGCCCTCGGCAACC
CCGCCGCCGGGCGCAATGGCGCCAAGCGCAATGGGGCCGACACCGGCTTCACCCTTGATCTCGCCCAGGGCGGAAGCGAC
GCCCAAGACGTTGAATTCGAGAAGTATTGA

Upstream 100 bases:

>100_bases
ATATCGGGCGGATCTTCTCCCAAGGCGAGTCCCGCGATGAGGCGATATTCGCCGGGTCGTCAACGGCTCCGCGCAGCCTC
TCCTAAAAGGAGCCTTTACG

Downstream 100 bases:

>100_bases
GCACGGACATGGCTGATCAGAAAGACGTTTCCGGGGAAACCCAATTCGTCACCCTGGGGATCGACCGCGAAATTTTCGCG
GTGCCGGTCGAAGCGGTGGT

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MRISIKLKLGLTFAVIIALSMVTAGLGVTSLAGLEANLRGLVDGPVQRLQTAEKLLVDVLQVIRAQKNMILAVSPQEAAQ
HEKTILGLRPQITNILDQAVSAATPEGKPKWEAFRVAWGEFALFDEKVRGFVRAGEPLKAQELSVSEGRQIVGDVEKQNM
DLVDLNQTQMEQAQADATAQYESSRTFLLSTILVSLIIAVGAGLWISLGISRGLGRAGSLAQEVAGGDLTKTIDNVPRDE
VGDLIGHINAMVKKLREVVGEANSAAENVSSGSQELSATAEELSQGATEQASSAEEASASMEQMAANIKQNADNASQTEK
IARQSSLDAQASGEAVTRAVVAMQTIAEKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVASEVRKLAERSQLAAA
EISTMSSQTVRAAQEAGDMLGRLVPDIRKTAELVSEISAACREQDIGGDQINQAIQQLDKVTQQNASASEEMSATSEELA
AQSEQLQASISYFRVDEGNGGTRAMPSRRLSRPVGTALVKKPVARGGRVALGNPAAGRNGAKRNGADTGFTLDLAQGGSD
AQDVEFEKY

Sequences:

>Translated_569_residues
MRISIKLKLGLTFAVIIALSMVTAGLGVTSLAGLEANLRGLVDGPVQRLQTAEKLLVDVLQVIRAQKNMILAVSPQEAAQ
HEKTILGLRPQITNILDQAVSAATPEGKPKWEAFRVAWGEFALFDEKVRGFVRAGEPLKAQELSVSEGRQIVGDVEKQNM
DLVDLNQTQMEQAQADATAQYESSRTFLLSTILVSLIIAVGAGLWISLGISRGLGRAGSLAQEVAGGDLTKTIDNVPRDE
VGDLIGHINAMVKKLREVVGEANSAAENVSSGSQELSATAEELSQGATEQASSAEEASASMEQMAANIKQNADNASQTEK
IARQSSLDAQASGEAVTRAVVAMQTIAEKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVASEVRKLAERSQLAAA
EISTMSSQTVRAAQEAGDMLGRLVPDIRKTAELVSEISAACREQDIGGDQINQAIQQLDKVTQQNASASEEMSATSEELA
AQSEQLQASISYFRVDEGNGGTRAMPSRRLSRPVGTALVKKPVARGGRVALGNPAAGRNGAKRNGADTGFTLDLAQGGSD
AQDVEFEKY
>Mature_569_residues
MRISIKLKLGLTFAVIIALSMVTAGLGVTSLAGLEANLRGLVDGPVQRLQTAEKLLVDVLQVIRAQKNMILAVSPQEAAQ
HEKTILGLRPQITNILDQAVSAATPEGKPKWEAFRVAWGEFALFDEKVRGFVRAGEPLKAQELSVSEGRQIVGDVEKQNM
DLVDLNQTQMEQAQADATAQYESSRTFLLSTILVSLIIAVGAGLWISLGISRGLGRAGSLAQEVAGGDLTKTIDNVPRDE
VGDLIGHINAMVKKLREVVGEANSAAENVSSGSQELSATAEELSQGATEQASSAEEASASMEQMAANIKQNADNASQTEK
IARQSSLDAQASGEAVTRAVVAMQTIAEKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVASEVRKLAERSQLAAA
EISTMSSQTVRAAQEAGDMLGRLVPDIRKTAELVSEISAACREQDIGGDQINQAIQQLDKVTQQNASASEEMSATSEELA
AQSEQLQASISYFRVDEGNGGTRAMPSRRLSRPVGTALVKKPVARGGRVALGNPAAGRNGAKRNGADTGFTLDLAQGGSD
AQDVEFEKY

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=325, Percent_Identity=39.0769230769231, Blast_Score=199, Evalue=4e-52,
Organism=Escherichia coli, GI1788194, Length=365, Percent_Identity=35.6164383561644, Blast_Score=190, Evalue=2e-49,
Organism=Escherichia coli, GI2367378, Length=356, Percent_Identity=35.9550561797753, Blast_Score=182, Evalue=5e-47,
Organism=Escherichia coli, GI1788195, Length=288, Percent_Identity=39.9305555555556, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1789453, Length=325, Percent_Identity=30.7692307692308, Blast_Score=136, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 60134; Mature: 60134

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISIKLKLGLTFAVIIALSMVTAGLGVTSLAGLEANLRGLVDGPVQRLQTAEKLLVDVL
CEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QVIRAQKNMILAVSPQEAAQHEKTILGLRPQITNILDQAVSAATPEGKPKWEAFRVAWGE
HHHHHCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
FALFDEKVRGFVRAGEPLKAQELSVSEGRQIVGDVEKQNMDLVDLNQTQMEQAQADATAQ
HHHHHHHHHHHHHCCCCCCHHHCCHHHCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
YESSRTFLLSTILVSLIIAVGAGLWISLGISRGLGRAGSLAQEVAGGDLTKTIDNVPRDE
HHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCHHH
VGDLIGHINAMVKKLREVVGEANSAAENVSSGSQELSATAEELSQGATEQASSAEEASAS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MEQMAANIKQNADNASQTEKIARQSSLDAQASGEAVTRAVVAMQTIAEKITIVQEIARQT
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLALNAAVEAARAGEHGRGFAVVASEVRKLAERSQLAAAEISTMSSQTVRAAQEAGDML
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRLVPDIRKTAELVSEISAACREQDIGGDQINQAIQQLDKVTQQNASASEEMSATSEELA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AQSEQLQASISYFRVDEGNGGTRAMPSRRLSRPVGTALVKKPVARGGRVALGNPAAGRNG
HHHHHHHHHHHHEEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCCC
AKRNGADTGFTLDLAQGGSDAQDVEFEKY
CCCCCCCCCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MRISIKLKLGLTFAVIIALSMVTAGLGVTSLAGLEANLRGLVDGPVQRLQTAEKLLVDVL
CEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QVIRAQKNMILAVSPQEAAQHEKTILGLRPQITNILDQAVSAATPEGKPKWEAFRVAWGE
HHHHHCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
FALFDEKVRGFVRAGEPLKAQELSVSEGRQIVGDVEKQNMDLVDLNQTQMEQAQADATAQ
HHHHHHHHHHHHHCCCCCCHHHCCHHHCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
YESSRTFLLSTILVSLIIAVGAGLWISLGISRGLGRAGSLAQEVAGGDLTKTIDNVPRDE
HHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCHHH
VGDLIGHINAMVKKLREVVGEANSAAENVSSGSQELSATAEELSQGATEQASSAEEASAS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MEQMAANIKQNADNASQTEKIARQSSLDAQASGEAVTRAVVAMQTIAEKITIVQEIARQT
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLALNAAVEAARAGEHGRGFAVVASEVRKLAERSQLAAAEISTMSSQTVRAAQEAGDML
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRLVPDIRKTAELVSEISAACREQDIGGDQINQAIQQLDKVTQQNASASEEMSATSEELA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AQSEQLQASISYFRVDEGNGGTRAMPSRRLSRPVGTALVKKPVARGGRVALGNPAAGRNG
HHHHHHHHHHHHEEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCCC
AKRNGADTGFTLDLAQGGSDAQDVEFEKY
CCCCCCCCCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]