Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

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The map label for this gene is katE [H]

Identifier: 83592692

GI number: 83592692

Start: 1596203

End: 1598317

Strand: Reverse

Name: katE [H]

Synonym: Rru_A1356

Alternate gene names: 83592692

Gene position: 1598317-1596203 (Counterclockwise)

Preceding gene: 83592693

Following gene: 83592691

Centisome position: 36.72

GC content: 62.7

Gene sequence:

>2115_bases
ATGGCCAAACGCTCAACCGACGCCCTGACCCCGGCCGAAATCGCCGACGCCAAAATTCTGCGCGGCACCGGGGGCGAAAC
CCATCAGATCGCCGAGGGCGACACCCCCGTGCTGACGACCCAGCAGGGGATCCCAGTGGCCGACGATCAGAATTCCCTGC
GCATCGGCCCACGTGGACCAACCCTGCTGGAAGACTTCGCCTTCCGCGAAAAGATCTTCCATTTCGACCACGAGCGCATT
CCCGAGCGCATCGTTCATGCCCGGGGGTTCGGCGCCCATGGCACCTTCGAAACCTATGAAGACCTAAGCGCCCTGACCTC
GGCCGATATCTTTCAGCGCGCCGGCGAAAAGACCCCCGCCTTCGTCCGCTTCTCGACGGTGGCGGGCAATCTCGGCTCGT
CCGATGTCGCCCGCGATGTGCGGGGATTCGCCGTCAAGCTTTATACCAAGCAAGGTAATTGGGACATCGTCGGCAACAAC
ATCCCGGTGTTCTTCATCCAAGACGCCATCAAGTTTCCCGATCTGATCCACGCCGCCAAACAGGAACCCGACAGCGGCTT
CCCCCAGGCGCAAACCGCCCACGACAATTTCTGGGACTTCATCTCCCTGATGCCGGAATCGCTGCATATGGCGTTATGGA
TCATGTCCGATCGCACCATCCCGCGCTCGTTCCGCTTCATGGAAGGCTTTGGCGTTCATACCTTCCGACTGGTCACCGCC
GAGGGCAAATCCAGCTTCGTCAAATTTCACTGGAAGCCCAAGCTTGGCCTGCAGTCGGTGGTGTGGAACGAGGCGGTCAA
GATCAACGGCGCCGATCCCGATTTCCACCGCCGCGACCTGTGGTCGGCGATCAAGCGCGGCGATTATCCCGAATGGGACT
TGGGTCTGCAGGTTTTTGATGACGCCTTCGCCGACAGCTTCCCCTTCGATGTGCTGGACGCCACCAAGCTGATCCCCGAG
GAATTGGTGCCGATCCGCATCGTCGGCCGCCTGGTGCTAGATCGCACCGTCGATAACTTCTTCGCCGAAACCGAACAGGT
GGCCTTCCATACCGCCAACATCGTGCCCGGCATCGATTTCACCAATGATCCCCTGCTTCAGGGCCGCAATTTCTCCTATC
TCGACACCCAGATCAAACGCCTGGGCGGCCCCAATTTCACCCATCTGCCGATCAATGCCGCCAAGTGTCCCTTCCACAGC
TTCCAGCAAGACGGCCATATGGCCTTCGTCAATCCGAAAGGTCGGGCCAATTACGAGCCGAATTCCTGGGGACCGGGCAT
CGGCGGCCCCCGGGAATCACCCGAAAGCGGCTTCCACAGCTTTCCCGCCGAGGACGGCGGCGAGAAGCGCCGGGTGCGCG
GCGAGTTGTTCGCCGATCACTACAGTCAGGCCCGCCAGTTCTACCGGAGCCAGACGCCCGTCGAGCAAACCCACATCAAA
GATTCGTTCGTTTTTGAACTGAGCAAGGTCGAAACCCCGGCCATCCGCGCCCGGGTGGTGTCGCATCTGCTGACCATCGA
TCAGACTCTGGCCCAGAAAGTGGCCGATGGCCTGGGGCTGGCCGAGCTGCCGGAAGCGGCTAAACCGGCCCGCCCGCTGG
TCGAGGATCTGCCCGCCTCGCCGGCGCTCAGCATCCTTCTCAACCCGCCCAAGGATTTCTCCGGACGCAAGGTCGGCGTG
CTGGTCAGCGATGGCGTCGACGGCGCCTTTCTTGACGAGATCGAGCGCCTCCTGACGGCGGAAGGCGCCCAAATGGAGGT
GATCGCCCCCAGGGTCGGCGGCTTCACCGCCAAGGATGGCACCCTGCGCCCGGCCCACCAGAAGGTGAACGGCGCCCCTT
CCGTGCTGTACGACGCCGTCGCCGTTCTTCTGTCGACCGAGGGCGCCAAGCTTCTGCTGAACGAAGCCACCGCCAAGGAT
TTCGTCAGCGACGCCTTCGCCCATGCCAAGGTCATCGCCTTTACCCAGGCCGCCCAGCCCTTGCTGGAAAAGGCCGGGGT
GATCGCCGACGAGGGCTGCCTGCTGCTTGATACCCCCGCCAAGGCCGAAACGTTCCTCGGCCTCTGCCGCAAGGGCCGGC
GTTGGGAACGCGAGGCCAAGGTTCACGCGGTCTAG

Upstream 100 bases:

>100_bases
CATGAACCCATCGTCTTTTCCCGGAGTTACAGCAGCGACATAAAATCGGGCGACCTCCCGCTTCGCAGGGGCGCCCTCTG
GGACTGCGGGAGACTATTTG

Downstream 100 bases:

>100_bases
GGCAAATCCAGGGCGGCCCGAGCCAGCAAGTCTTTCCCTTTGCCGGTTCCACGACACCATCAATATCAAAGCGCTTCTCA
AAGATTTCTGGCAAAGCGCT

Product: catalase

Products: NA

Alternate protein names: KAT2 [H]

Number of amino acids: Translated: 704; Mature: 703

Protein sequence:

>704_residues
MAKRSTDALTPAEIADAKILRGTGGETHQIAEGDTPVLTTQQGIPVADDQNSLRIGPRGPTLLEDFAFREKIFHFDHERI
PERIVHARGFGAHGTFETYEDLSALTSADIFQRAGEKTPAFVRFSTVAGNLGSSDVARDVRGFAVKLYTKQGNWDIVGNN
IPVFFIQDAIKFPDLIHAAKQEPDSGFPQAQTAHDNFWDFISLMPESLHMALWIMSDRTIPRSFRFMEGFGVHTFRLVTA
EGKSSFVKFHWKPKLGLQSVVWNEAVKINGADPDFHRRDLWSAIKRGDYPEWDLGLQVFDDAFADSFPFDVLDATKLIPE
ELVPIRIVGRLVLDRTVDNFFAETEQVAFHTANIVPGIDFTNDPLLQGRNFSYLDTQIKRLGGPNFTHLPINAAKCPFHS
FQQDGHMAFVNPKGRANYEPNSWGPGIGGPRESPESGFHSFPAEDGGEKRRVRGELFADHYSQARQFYRSQTPVEQTHIK
DSFVFELSKVETPAIRARVVSHLLTIDQTLAQKVADGLGLAELPEAAKPARPLVEDLPASPALSILLNPPKDFSGRKVGV
LVSDGVDGAFLDEIERLLTAEGAQMEVIAPRVGGFTAKDGTLRPAHQKVNGAPSVLYDAVAVLLSTEGAKLLLNEATAKD
FVSDAFAHAKVIAFTQAAQPLLEKAGVIADEGCLLLDTPAKAETFLGLCRKGRRWEREAKVHAV

Sequences:

>Translated_704_residues
MAKRSTDALTPAEIADAKILRGTGGETHQIAEGDTPVLTTQQGIPVADDQNSLRIGPRGPTLLEDFAFREKIFHFDHERI
PERIVHARGFGAHGTFETYEDLSALTSADIFQRAGEKTPAFVRFSTVAGNLGSSDVARDVRGFAVKLYTKQGNWDIVGNN
IPVFFIQDAIKFPDLIHAAKQEPDSGFPQAQTAHDNFWDFISLMPESLHMALWIMSDRTIPRSFRFMEGFGVHTFRLVTA
EGKSSFVKFHWKPKLGLQSVVWNEAVKINGADPDFHRRDLWSAIKRGDYPEWDLGLQVFDDAFADSFPFDVLDATKLIPE
ELVPIRIVGRLVLDRTVDNFFAETEQVAFHTANIVPGIDFTNDPLLQGRNFSYLDTQIKRLGGPNFTHLPINAAKCPFHS
FQQDGHMAFVNPKGRANYEPNSWGPGIGGPRESPESGFHSFPAEDGGEKRRVRGELFADHYSQARQFYRSQTPVEQTHIK
DSFVFELSKVETPAIRARVVSHLLTIDQTLAQKVADGLGLAELPEAAKPARPLVEDLPASPALSILLNPPKDFSGRKVGV
LVSDGVDGAFLDEIERLLTAEGAQMEVIAPRVGGFTAKDGTLRPAHQKVNGAPSVLYDAVAVLLSTEGAKLLLNEATAKD
FVSDAFAHAKVIAFTQAAQPLLEKAGVIADEGCLLLDTPAKAETFLGLCRKGRRWEREAKVHAV
>Mature_703_residues
AKRSTDALTPAEIADAKILRGTGGETHQIAEGDTPVLTTQQGIPVADDQNSLRIGPRGPTLLEDFAFREKIFHFDHERIP
ERIVHARGFGAHGTFETYEDLSALTSADIFQRAGEKTPAFVRFSTVAGNLGSSDVARDVRGFAVKLYTKQGNWDIVGNNI
PVFFIQDAIKFPDLIHAAKQEPDSGFPQAQTAHDNFWDFISLMPESLHMALWIMSDRTIPRSFRFMEGFGVHTFRLVTAE
GKSSFVKFHWKPKLGLQSVVWNEAVKINGADPDFHRRDLWSAIKRGDYPEWDLGLQVFDDAFADSFPFDVLDATKLIPEE
LVPIRIVGRLVLDRTVDNFFAETEQVAFHTANIVPGIDFTNDPLLQGRNFSYLDTQIKRLGGPNFTHLPINAAKCPFHSF
QQDGHMAFVNPKGRANYEPNSWGPGIGGPRESPESGFHSFPAEDGGEKRRVRGELFADHYSQARQFYRSQTPVEQTHIKD
SFVFELSKVETPAIRARVVSHLLTIDQTLAQKVADGLGLAELPEAAKPARPLVEDLPASPALSILLNPPKDFSGRKVGVL
VSDGVDGAFLDEIERLLTAEGAQMEVIAPRVGGFTAKDGTLRPAHQKVNGAPSVLYDAVAVLLSTEGAKLLLNEATAKDF
VSDAFAHAKVIAFTQAAQPLLEKAGVIADEGCLLLDTPAKAETFLGLCRKGRRWEREAKVHAV

Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. Could protect cells in nodules which have a high potential to produce hydrogen peroxide because of the strong reducing conditions requ

COG id: COG0753

COG function: function code P; Catalase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the catalase family. HPII subfamily [H]

Homologues:

Organism=Homo sapiens, GI4557014, Length=471, Percent_Identity=44.3736730360934, Blast_Score=385, Evalue=1e-107,
Organism=Escherichia coli, GI48994891, Length=678, Percent_Identity=51.9174041297935, Blast_Score=659, Evalue=0.0,
Organism=Caenorhabditis elegans, GI71998444, Length=436, Percent_Identity=44.0366972477064, Blast_Score=375, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI25147792, Length=439, Percent_Identity=45.1025056947608, Blast_Score=372, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI25151141, Length=439, Percent_Identity=45.1025056947608, Blast_Score=372, Evalue=1e-103,
Organism=Saccharomyces cerevisiae, GI6321525, Length=540, Percent_Identity=33.8888888888889, Blast_Score=300, Evalue=5e-82,
Organism=Saccharomyces cerevisiae, GI6320462, Length=513, Percent_Identity=34.8927875243665, Blast_Score=295, Evalue=2e-80,
Organism=Drosophila melanogaster, GI19920968, Length=437, Percent_Identity=41.4187643020595, Blast_Score=351, Evalue=8e-97,
Organism=Drosophila melanogaster, GI17981717, Length=436, Percent_Identity=42.2018348623853, Blast_Score=350, Evalue=2e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002226
- InterPro:   IPR020835
- InterPro:   IPR010582
- InterPro:   IPR018028
- InterPro:   IPR011614 [H]

Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]

EC number: =1.11.1.6 [H]

Molecular weight: Translated: 77605; Mature: 77473

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRSTDALTPAEIADAKILRGTGGETHQIAEGDTPVLTTQQGIPVADDQNSLRIGPRGP
CCCCCCCCCCCHHHCCCCEEECCCCCCCEECCCCCCEEEECCCCCCCCCCCCEEECCCCC
TLLEDFAFREKIFHFDHERIPERIVHARGFGAHGTFETYEDLSALTSADIFQRAGEKTPA
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
FVRFSTVAGNLGSSDVARDVRGFAVKLYTKQGNWDIVGNNIPVFFIQDAIKFPDLIHAAK
EEEEEECCCCCCCHHHHHHHCCEEEEEEEECCCEEEECCCCCEEEECCHHCCHHHHHHHH
QEPDSGFPQAQTAHDNFWDFISLMPESLHMALWIMSDRTIPRSFRFMEGFGVHTFRLVTA
CCCCCCCCCCCCCCCHHHHHHHHCHHHHEEEEEEECCCCCCHHHHHHHCCCCEEEEEEEE
EGKSSFVKFHWKPKLGLQSVVWNEAVKINGADPDFHRRDLWSAIKRGDYPEWDLGLQVFD
CCCCCEEEEEECCCCCHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHCCHHHHH
DAFADSFPFDVLDATKLIPEELVPIRIVGRLVLDRTVDNFFAETEQVAFHTANIVPGIDF
HHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
TNDPLLQGRNFSYLDTQIKRLGGPNFTHLPINAAKCPFHSFQQDGHMAFVNPKGRANYEP
CCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHCCCCCEEEECCCCCCCCCC
NSWGPGIGGPRESPESGFHSFPAEDGGEKRRVRGELFADHYSQARQFYRSQTPVEQTHIK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
DSFVFELSKVETPAIRARVVSHLLTIDQTLAQKVADGLGLAELPEAAKPARPLVEDLPAS
HHHEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHCCCC
PALSILLNPPKDFSGRKVGVLVSDGVDGAFLDEIERLLTAEGAQMEVIAPRVGGFTAKDG
CCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEECCCC
TLRPAHQKVNGAPSVLYDAVAVLLSTEGAKLLLNEATAKDFVSDAFAHAKVIAFTQAAQP
CCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEKAGVIADEGCLLLDTPAKAETFLGLCRKGRRWEREAKVHAV
HHHHCCCEECCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKRSTDALTPAEIADAKILRGTGGETHQIAEGDTPVLTTQQGIPVADDQNSLRIGPRGP
CCCCCCCCCCHHHCCCCEEECCCCCCCEECCCCCCEEEECCCCCCCCCCCCEEECCCCC
TLLEDFAFREKIFHFDHERIPERIVHARGFGAHGTFETYEDLSALTSADIFQRAGEKTPA
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
FVRFSTVAGNLGSSDVARDVRGFAVKLYTKQGNWDIVGNNIPVFFIQDAIKFPDLIHAAK
EEEEEECCCCCCCHHHHHHHCCEEEEEEEECCCEEEECCCCCEEEECCHHCCHHHHHHHH
QEPDSGFPQAQTAHDNFWDFISLMPESLHMALWIMSDRTIPRSFRFMEGFGVHTFRLVTA
CCCCCCCCCCCCCCCHHHHHHHHCHHHHEEEEEEECCCCCCHHHHHHHCCCCEEEEEEEE
EGKSSFVKFHWKPKLGLQSVVWNEAVKINGADPDFHRRDLWSAIKRGDYPEWDLGLQVFD
CCCCCEEEEEECCCCCHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHCCHHHHH
DAFADSFPFDVLDATKLIPEELVPIRIVGRLVLDRTVDNFFAETEQVAFHTANIVPGIDF
HHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
TNDPLLQGRNFSYLDTQIKRLGGPNFTHLPINAAKCPFHSFQQDGHMAFVNPKGRANYEP
CCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHCCCCCEEEECCCCCCCCCC
NSWGPGIGGPRESPESGFHSFPAEDGGEKRRVRGELFADHYSQARQFYRSQTPVEQTHIK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
DSFVFELSKVETPAIRARVVSHLLTIDQTLAQKVADGLGLAELPEAAKPARPLVEDLPAS
HHHEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHCCCC
PALSILLNPPKDFSGRKVGVLVSDGVDGAFLDEIERLLTAEGAQMEVIAPRVGGFTAKDG
CCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEECCCC
TLRPAHQKVNGAPSVLYDAVAVLLSTEGAKLLLNEATAKDFVSDAFAHAKVIAFTQAAQP
CCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEKAGVIADEGCLLLDTPAKAETFLGLCRKGRRWEREAKVHAV
HHHHCCCEECCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10198032; 11481431 [H]