| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is katE [H]
Identifier: 83592692
GI number: 83592692
Start: 1596203
End: 1598317
Strand: Reverse
Name: katE [H]
Synonym: Rru_A1356
Alternate gene names: 83592692
Gene position: 1598317-1596203 (Counterclockwise)
Preceding gene: 83592693
Following gene: 83592691
Centisome position: 36.72
GC content: 62.7
Gene sequence:
>2115_bases ATGGCCAAACGCTCAACCGACGCCCTGACCCCGGCCGAAATCGCCGACGCCAAAATTCTGCGCGGCACCGGGGGCGAAAC CCATCAGATCGCCGAGGGCGACACCCCCGTGCTGACGACCCAGCAGGGGATCCCAGTGGCCGACGATCAGAATTCCCTGC GCATCGGCCCACGTGGACCAACCCTGCTGGAAGACTTCGCCTTCCGCGAAAAGATCTTCCATTTCGACCACGAGCGCATT CCCGAGCGCATCGTTCATGCCCGGGGGTTCGGCGCCCATGGCACCTTCGAAACCTATGAAGACCTAAGCGCCCTGACCTC GGCCGATATCTTTCAGCGCGCCGGCGAAAAGACCCCCGCCTTCGTCCGCTTCTCGACGGTGGCGGGCAATCTCGGCTCGT CCGATGTCGCCCGCGATGTGCGGGGATTCGCCGTCAAGCTTTATACCAAGCAAGGTAATTGGGACATCGTCGGCAACAAC ATCCCGGTGTTCTTCATCCAAGACGCCATCAAGTTTCCCGATCTGATCCACGCCGCCAAACAGGAACCCGACAGCGGCTT CCCCCAGGCGCAAACCGCCCACGACAATTTCTGGGACTTCATCTCCCTGATGCCGGAATCGCTGCATATGGCGTTATGGA TCATGTCCGATCGCACCATCCCGCGCTCGTTCCGCTTCATGGAAGGCTTTGGCGTTCATACCTTCCGACTGGTCACCGCC GAGGGCAAATCCAGCTTCGTCAAATTTCACTGGAAGCCCAAGCTTGGCCTGCAGTCGGTGGTGTGGAACGAGGCGGTCAA GATCAACGGCGCCGATCCCGATTTCCACCGCCGCGACCTGTGGTCGGCGATCAAGCGCGGCGATTATCCCGAATGGGACT TGGGTCTGCAGGTTTTTGATGACGCCTTCGCCGACAGCTTCCCCTTCGATGTGCTGGACGCCACCAAGCTGATCCCCGAG GAATTGGTGCCGATCCGCATCGTCGGCCGCCTGGTGCTAGATCGCACCGTCGATAACTTCTTCGCCGAAACCGAACAGGT GGCCTTCCATACCGCCAACATCGTGCCCGGCATCGATTTCACCAATGATCCCCTGCTTCAGGGCCGCAATTTCTCCTATC TCGACACCCAGATCAAACGCCTGGGCGGCCCCAATTTCACCCATCTGCCGATCAATGCCGCCAAGTGTCCCTTCCACAGC TTCCAGCAAGACGGCCATATGGCCTTCGTCAATCCGAAAGGTCGGGCCAATTACGAGCCGAATTCCTGGGGACCGGGCAT CGGCGGCCCCCGGGAATCACCCGAAAGCGGCTTCCACAGCTTTCCCGCCGAGGACGGCGGCGAGAAGCGCCGGGTGCGCG GCGAGTTGTTCGCCGATCACTACAGTCAGGCCCGCCAGTTCTACCGGAGCCAGACGCCCGTCGAGCAAACCCACATCAAA GATTCGTTCGTTTTTGAACTGAGCAAGGTCGAAACCCCGGCCATCCGCGCCCGGGTGGTGTCGCATCTGCTGACCATCGA TCAGACTCTGGCCCAGAAAGTGGCCGATGGCCTGGGGCTGGCCGAGCTGCCGGAAGCGGCTAAACCGGCCCGCCCGCTGG TCGAGGATCTGCCCGCCTCGCCGGCGCTCAGCATCCTTCTCAACCCGCCCAAGGATTTCTCCGGACGCAAGGTCGGCGTG CTGGTCAGCGATGGCGTCGACGGCGCCTTTCTTGACGAGATCGAGCGCCTCCTGACGGCGGAAGGCGCCCAAATGGAGGT GATCGCCCCCAGGGTCGGCGGCTTCACCGCCAAGGATGGCACCCTGCGCCCGGCCCACCAGAAGGTGAACGGCGCCCCTT CCGTGCTGTACGACGCCGTCGCCGTTCTTCTGTCGACCGAGGGCGCCAAGCTTCTGCTGAACGAAGCCACCGCCAAGGAT TTCGTCAGCGACGCCTTCGCCCATGCCAAGGTCATCGCCTTTACCCAGGCCGCCCAGCCCTTGCTGGAAAAGGCCGGGGT GATCGCCGACGAGGGCTGCCTGCTGCTTGATACCCCCGCCAAGGCCGAAACGTTCCTCGGCCTCTGCCGCAAGGGCCGGC GTTGGGAACGCGAGGCCAAGGTTCACGCGGTCTAG
Upstream 100 bases:
>100_bases CATGAACCCATCGTCTTTTCCCGGAGTTACAGCAGCGACATAAAATCGGGCGACCTCCCGCTTCGCAGGGGCGCCCTCTG GGACTGCGGGAGACTATTTG
Downstream 100 bases:
>100_bases GGCAAATCCAGGGCGGCCCGAGCCAGCAAGTCTTTCCCTTTGCCGGTTCCACGACACCATCAATATCAAAGCGCTTCTCA AAGATTTCTGGCAAAGCGCT
Product: catalase
Products: NA
Alternate protein names: KAT2 [H]
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MAKRSTDALTPAEIADAKILRGTGGETHQIAEGDTPVLTTQQGIPVADDQNSLRIGPRGPTLLEDFAFREKIFHFDHERI PERIVHARGFGAHGTFETYEDLSALTSADIFQRAGEKTPAFVRFSTVAGNLGSSDVARDVRGFAVKLYTKQGNWDIVGNN IPVFFIQDAIKFPDLIHAAKQEPDSGFPQAQTAHDNFWDFISLMPESLHMALWIMSDRTIPRSFRFMEGFGVHTFRLVTA EGKSSFVKFHWKPKLGLQSVVWNEAVKINGADPDFHRRDLWSAIKRGDYPEWDLGLQVFDDAFADSFPFDVLDATKLIPE ELVPIRIVGRLVLDRTVDNFFAETEQVAFHTANIVPGIDFTNDPLLQGRNFSYLDTQIKRLGGPNFTHLPINAAKCPFHS FQQDGHMAFVNPKGRANYEPNSWGPGIGGPRESPESGFHSFPAEDGGEKRRVRGELFADHYSQARQFYRSQTPVEQTHIK DSFVFELSKVETPAIRARVVSHLLTIDQTLAQKVADGLGLAELPEAAKPARPLVEDLPASPALSILLNPPKDFSGRKVGV LVSDGVDGAFLDEIERLLTAEGAQMEVIAPRVGGFTAKDGTLRPAHQKVNGAPSVLYDAVAVLLSTEGAKLLLNEATAKD FVSDAFAHAKVIAFTQAAQPLLEKAGVIADEGCLLLDTPAKAETFLGLCRKGRRWEREAKVHAV
Sequences:
>Translated_704_residues MAKRSTDALTPAEIADAKILRGTGGETHQIAEGDTPVLTTQQGIPVADDQNSLRIGPRGPTLLEDFAFREKIFHFDHERI PERIVHARGFGAHGTFETYEDLSALTSADIFQRAGEKTPAFVRFSTVAGNLGSSDVARDVRGFAVKLYTKQGNWDIVGNN IPVFFIQDAIKFPDLIHAAKQEPDSGFPQAQTAHDNFWDFISLMPESLHMALWIMSDRTIPRSFRFMEGFGVHTFRLVTA EGKSSFVKFHWKPKLGLQSVVWNEAVKINGADPDFHRRDLWSAIKRGDYPEWDLGLQVFDDAFADSFPFDVLDATKLIPE ELVPIRIVGRLVLDRTVDNFFAETEQVAFHTANIVPGIDFTNDPLLQGRNFSYLDTQIKRLGGPNFTHLPINAAKCPFHS FQQDGHMAFVNPKGRANYEPNSWGPGIGGPRESPESGFHSFPAEDGGEKRRVRGELFADHYSQARQFYRSQTPVEQTHIK DSFVFELSKVETPAIRARVVSHLLTIDQTLAQKVADGLGLAELPEAAKPARPLVEDLPASPALSILLNPPKDFSGRKVGV LVSDGVDGAFLDEIERLLTAEGAQMEVIAPRVGGFTAKDGTLRPAHQKVNGAPSVLYDAVAVLLSTEGAKLLLNEATAKD FVSDAFAHAKVIAFTQAAQPLLEKAGVIADEGCLLLDTPAKAETFLGLCRKGRRWEREAKVHAV >Mature_703_residues AKRSTDALTPAEIADAKILRGTGGETHQIAEGDTPVLTTQQGIPVADDQNSLRIGPRGPTLLEDFAFREKIFHFDHERIP ERIVHARGFGAHGTFETYEDLSALTSADIFQRAGEKTPAFVRFSTVAGNLGSSDVARDVRGFAVKLYTKQGNWDIVGNNI PVFFIQDAIKFPDLIHAAKQEPDSGFPQAQTAHDNFWDFISLMPESLHMALWIMSDRTIPRSFRFMEGFGVHTFRLVTAE GKSSFVKFHWKPKLGLQSVVWNEAVKINGADPDFHRRDLWSAIKRGDYPEWDLGLQVFDDAFADSFPFDVLDATKLIPEE LVPIRIVGRLVLDRTVDNFFAETEQVAFHTANIVPGIDFTNDPLLQGRNFSYLDTQIKRLGGPNFTHLPINAAKCPFHSF QQDGHMAFVNPKGRANYEPNSWGPGIGGPRESPESGFHSFPAEDGGEKRRVRGELFADHYSQARQFYRSQTPVEQTHIKD SFVFELSKVETPAIRARVVSHLLTIDQTLAQKVADGLGLAELPEAAKPARPLVEDLPASPALSILLNPPKDFSGRKVGVL VSDGVDGAFLDEIERLLTAEGAQMEVIAPRVGGFTAKDGTLRPAHQKVNGAPSVLYDAVAVLLSTEGAKLLLNEATAKDF VSDAFAHAKVIAFTQAAQPLLEKAGVIADEGCLLLDTPAKAETFLGLCRKGRRWEREAKVHAV
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. Could protect cells in nodules which have a high potential to produce hydrogen peroxide because of the strong reducing conditions requ
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=471, Percent_Identity=44.3736730360934, Blast_Score=385, Evalue=1e-107, Organism=Escherichia coli, GI48994891, Length=678, Percent_Identity=51.9174041297935, Blast_Score=659, Evalue=0.0, Organism=Caenorhabditis elegans, GI71998444, Length=436, Percent_Identity=44.0366972477064, Blast_Score=375, Evalue=1e-104, Organism=Caenorhabditis elegans, GI25147792, Length=439, Percent_Identity=45.1025056947608, Blast_Score=372, Evalue=1e-103, Organism=Caenorhabditis elegans, GI25151141, Length=439, Percent_Identity=45.1025056947608, Blast_Score=372, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6321525, Length=540, Percent_Identity=33.8888888888889, Blast_Score=300, Evalue=5e-82, Organism=Saccharomyces cerevisiae, GI6320462, Length=513, Percent_Identity=34.8927875243665, Blast_Score=295, Evalue=2e-80, Organism=Drosophila melanogaster, GI19920968, Length=437, Percent_Identity=41.4187643020595, Blast_Score=351, Evalue=8e-97, Organism=Drosophila melanogaster, GI17981717, Length=436, Percent_Identity=42.2018348623853, Blast_Score=350, Evalue=2e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 77605; Mature: 77473
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRSTDALTPAEIADAKILRGTGGETHQIAEGDTPVLTTQQGIPVADDQNSLRIGPRGP CCCCCCCCCCCHHHCCCCEEECCCCCCCEECCCCCCEEEECCCCCCCCCCCCEEECCCCC TLLEDFAFREKIFHFDHERIPERIVHARGFGAHGTFETYEDLSALTSADIFQRAGEKTPA HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC FVRFSTVAGNLGSSDVARDVRGFAVKLYTKQGNWDIVGNNIPVFFIQDAIKFPDLIHAAK EEEEEECCCCCCCHHHHHHHCCEEEEEEEECCCEEEECCCCCEEEECCHHCCHHHHHHHH QEPDSGFPQAQTAHDNFWDFISLMPESLHMALWIMSDRTIPRSFRFMEGFGVHTFRLVTA CCCCCCCCCCCCCCCHHHHHHHHCHHHHEEEEEEECCCCCCHHHHHHHCCCCEEEEEEEE EGKSSFVKFHWKPKLGLQSVVWNEAVKINGADPDFHRRDLWSAIKRGDYPEWDLGLQVFD CCCCCEEEEEECCCCCHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHCCHHHHH DAFADSFPFDVLDATKLIPEELVPIRIVGRLVLDRTVDNFFAETEQVAFHTANIVPGIDF HHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC TNDPLLQGRNFSYLDTQIKRLGGPNFTHLPINAAKCPFHSFQQDGHMAFVNPKGRANYEP CCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHCCCCCEEEECCCCCCCCCC NSWGPGIGGPRESPESGFHSFPAEDGGEKRRVRGELFADHYSQARQFYRSQTPVEQTHIK CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC DSFVFELSKVETPAIRARVVSHLLTIDQTLAQKVADGLGLAELPEAAKPARPLVEDLPAS HHHEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHCCCC PALSILLNPPKDFSGRKVGVLVSDGVDGAFLDEIERLLTAEGAQMEVIAPRVGGFTAKDG CCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEECCCC TLRPAHQKVNGAPSVLYDAVAVLLSTEGAKLLLNEATAKDFVSDAFAHAKVIAFTQAAQP CCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LLEKAGVIADEGCLLLDTPAKAETFLGLCRKGRRWEREAKVHAV HHHHCCCEECCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AKRSTDALTPAEIADAKILRGTGGETHQIAEGDTPVLTTQQGIPVADDQNSLRIGPRGP CCCCCCCCCCHHHCCCCEEECCCCCCCEECCCCCCEEEECCCCCCCCCCCCEEECCCCC TLLEDFAFREKIFHFDHERIPERIVHARGFGAHGTFETYEDLSALTSADIFQRAGEKTPA HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC FVRFSTVAGNLGSSDVARDVRGFAVKLYTKQGNWDIVGNNIPVFFIQDAIKFPDLIHAAK EEEEEECCCCCCCHHHHHHHCCEEEEEEEECCCEEEECCCCCEEEECCHHCCHHHHHHHH QEPDSGFPQAQTAHDNFWDFISLMPESLHMALWIMSDRTIPRSFRFMEGFGVHTFRLVTA CCCCCCCCCCCCCCCHHHHHHHHCHHHHEEEEEEECCCCCCHHHHHHHCCCCEEEEEEEE EGKSSFVKFHWKPKLGLQSVVWNEAVKINGADPDFHRRDLWSAIKRGDYPEWDLGLQVFD CCCCCEEEEEECCCCCHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHCCHHHHH DAFADSFPFDVLDATKLIPEELVPIRIVGRLVLDRTVDNFFAETEQVAFHTANIVPGIDF HHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC TNDPLLQGRNFSYLDTQIKRLGGPNFTHLPINAAKCPFHSFQQDGHMAFVNPKGRANYEP CCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCHHHCCCCCEEEECCCCCCCCCC NSWGPGIGGPRESPESGFHSFPAEDGGEKRRVRGELFADHYSQARQFYRSQTPVEQTHIK CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC DSFVFELSKVETPAIRARVVSHLLTIDQTLAQKVADGLGLAELPEAAKPARPLVEDLPAS HHHEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHCCCC PALSILLNPPKDFSGRKVGVLVSDGVDGAFLDEIERLLTAEGAQMEVIAPRVGGFTAKDG CCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEECCCC TLRPAHQKVNGAPSVLYDAVAVLLSTEGAKLLLNEATAKDFVSDAFAHAKVIAFTQAAQP CCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LLEKAGVIADEGCLLLDTPAKAETFLGLCRKGRRWEREAKVHAV HHHHCCCEECCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10198032; 11481431 [H]