Click here to switch to the map view.

The map label for this gene is 83592668

Identifier: 83592668

GI number: 83592668

Start: 1568904

End: 1569629

Strand: Direct

Name: 83592668

Synonym: Rru_A1332

Alternate gene names: NA

Gene position: 1568904-1569629 (Clockwise)

Preceding gene: 83592667

Following gene: 83592669

Centisome position: 36.04

GC content: 69.15

Gene sequence:

>726_bases
ATGAGCCGCCGCCCGCCACGTCTGGCGCTGTCGCCGTTGCACCGCCTGCCCGCCGGGGTGAAGCTTGGCTGTCTGGCGGT
CACGGCGAGCGCGCTGCTGCTGGTCGAGGACTGGCGGGGGATCATGGCCGCCCTGGTGGCGACGGCGCTGCTTTACCGGC
TGGGCCGGCTGTCCTGGCGCGCCCTGCTTGGGCAACTGCGGCCTTTGCTGTGGCTGCTTTTGCCGCTGTTCGTGGTTCAA
GGCCTTGGCGGGTCGTGGGCCGAGGGCGGCGTTGTCGTGCTGCGCATCGCCACCCTGGTGCTGCTTGCCGCCCTGGTCAC
CCTGACGACGCGCACCGACGCGATGATCGAAACCATCGAGCGCGGGCTTGCGCCCTTTGCGCGTTTTGGCGTCGATCCGG
CCAAGGTTGGTCTGGCCTTTTCCCTGGCGCTGCGCTTCATCCCGGTGATCGGCAGCCAAAGCGCCGAGATCCGCGATGCC
CAGCGGGCGAGGGGGCTGGGGCGCAATCCCTTGGCCCTTGCCCTGCCGTTGATCGTGCGCACGCTCAAGATGGCCAATGA
TGTCGCCGACGCCATCGATGCCCGCTCGACCGATGGCGAGGACGACGAGGCCTTGCCCGTCGCCCGCCGCTCCCCCCCTT
CAGACATCCTGCCGACGAGGCTCCCATGCGCGGACATCGCACCACCACCAAGGACATCGTTCACATCGCCCTGTTCGCCG
CGCTGA

Upstream 100 bases:

>100_bases
TTCTCGCCGATTTCGACCGGGTGATCGTTTTCGAAAACGGCAAGGTCAGCATCGATGACCGTCCCGGTCCGGCGCTGGCG
CGCTATATCGGCACCATGCA

Downstream 100 bases:

>100_bases
CCGCGGCGTTGGCGCTGTTTCCGCCGATCGCCTTGCCGATAATCGGCGTGCCGATCACCGCCCAGTCGATGGGGGTGATG
TTGGCCGGCGCCATTCTTGG

Product: cobalt transport protein

Products: NA

Alternate protein names: ABC Transporter Inner Membrane Subunit; Cobalt ABC Transporter Permease Protein; Cobalt Transport Family Protein; Biotin ABC Transporter Permease; ABC Transporter Inner Membrane Protein; Cobalt Transport System Permease Protein; ABC-Type Cobalt Transport System Permease; ABC Transporter For Cobalt; Cobalt ABC Transporter Permease CbiQ; Biotin ABC Transporter Permease Protein

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSRRPPRLALSPLHRLPAGVKLGCLAVTASALLLVEDWRGIMAALVATALLYRLGRLSWRALLGQLRPLLWLLLPLFVVQ
GLGGSWAEGGVVVLRIATLVLLAALVTLTTRTDAMIETIERGLAPFARFGVDPAKVGLAFSLALRFIPVIGSQSAEIRDA
QRARGLGRNPLALALPLIVRTLKMANDVADAIDARSTDGEDDEALPVARRSPPSDILPTRLPCADIAPPPRTSFTSPCSP
R

Sequences:

>Translated_241_residues
MSRRPPRLALSPLHRLPAGVKLGCLAVTASALLLVEDWRGIMAALVATALLYRLGRLSWRALLGQLRPLLWLLLPLFVVQ
GLGGSWAEGGVVVLRIATLVLLAALVTLTTRTDAMIETIERGLAPFARFGVDPAKVGLAFSLALRFIPVIGSQSAEIRDA
QRARGLGRNPLALALPLIVRTLKMANDVADAIDARSTDGEDDEALPVARRSPPSDILPTRLPCADIAPPPRTSFTSPCSP
R
>Mature_240_residues
SRRPPRLALSPLHRLPAGVKLGCLAVTASALLLVEDWRGIMAALVATALLYRLGRLSWRALLGQLRPLLWLLLPLFVVQG
LGGSWAEGGVVVLRIATLVLLAALVTLTTRTDAMIETIERGLAPFARFGVDPAKVGLAFSLALRFIPVIGSQSAEIRDAQ
RARGLGRNPLALALPLIVRTLKMANDVADAIDARSTDGEDDEALPVARRSPPSDILPTRLPCADIAPPPRTSFTSPCSPR

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25780; Mature: 25649

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRPPRLALSPLHRLPAGVKLGCLAVTASALLLVEDWRGIMAALVATALLYRLGRLSWR
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLGQLRPLLWLLLPLFVVQGLGGSWAEGGVVVLRIATLVLLAALVTLTTRTDAMIETIE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLAPFARFGVDPAKVGLAFSLALRFIPVIGSQSAEIRDAQRARGLGRNPLALALPLIVR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
TLKMANDVADAIDARSTDGEDDEALPVARRSPPSDILPTRLPCADIAPPPRTSFTSPCSP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
R
C
>Mature Secondary Structure 
SRRPPRLALSPLHRLPAGVKLGCLAVTASALLLVEDWRGIMAALVATALLYRLGRLSWR
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLGQLRPLLWLLLPLFVVQGLGGSWAEGGVVVLRIATLVLLAALVTLTTRTDAMIETIE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLAPFARFGVDPAKVGLAFSLALRFIPVIGSQSAEIRDAQRARGLGRNPLALALPLIVR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
TLKMANDVADAIDARSTDGEDDEALPVARRSPPSDILPTRLPCADIAPPPRTSFTSPCSP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA