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The map label for this gene is ybbI [C]

Identifier: 83592647

GI number: 83592647

Start: 1547584

End: 1547982

Strand: Reverse

Name: ybbI [C]

Synonym: Rru_A1311

Alternate gene names: 83592647

Gene position: 1547982-1547584 (Counterclockwise)

Preceding gene: 83592648

Following gene: 83592646

Centisome position: 35.56

GC content: 62.66

Gene sequence:

>399_bases
ATGGACACTCTTTACTCGGTGACGGATCTGGGACGGAGCCTGGGGATCACCCCGCGCACCATTCGCTTCTACGAGGACAA
GGGCCTGATTTCGCCCCGCCGCGTAGGAACGACCCGGGTTTACACGGCCAAGGACCGGGCGCGGATGACCCTGATTTTGC
GCGGCAAAAGCCTGGGCTTCACCCTGCGCGACATCAAGGAGTTCCTTGACCTTTACGCCACCGACAAAACCCAGGTCGAA
CAGATCACCCTGCTGCTGGCCAAGGTGCGCCAGCGCGTCGCCCAACTCGAAGAGCAGCGCCAAGCGGTGGAAACCAGCTT
GCGCGAACTCCGCGATATCGAGCGCCAGAGCCTCGAAGCCCTGAAAGCCAAGGGGGTCAACCCCCACCCACAGGGCTGA

Upstream 100 bases:

>100_bases
TTTCCGCGCGCCTGAAGGGTAACGTTAGGGGCGCGATCACGCCCTTACCAGCTTCTCTGGCCCTTATCAGCTTCTCTGCA
ACGAAACGGCATTTATCGGC

Downstream 100 bases:

>100_bases
CTCCGCGTGCTGGCAGCCTATGAACCCGTCCCAAGGGAGGAGACGACCCAAAATGACCCAGGTGGTACTCGCAAGCTACG
TCCGGTCCCCCTTCACCCCG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Mercuric Resistance Operon Regulatory Protein MerR; Mercuric Resistance Operon Regulatory Protein; Regulatory Protein MerR; HTH-Type Transcriptional Regulator; Regulatory Gene Of GnyRDBHAL Cluster GnyR; Transcriptional Regulatory Protein MerR Family; Zinc-Responsive Transcriptional Regulator; MerR Family Regulatory Family; Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MDTLYSVTDLGRSLGITPRTIRFYEDKGLISPRRVGTTRVYTAKDRARMTLILRGKSLGFTLRDIKEFLDLYATDKTQVE
QITLLLAKVRQRVAQLEEQRQAVETSLRELRDIERQSLEALKAKGVNPHPQG

Sequences:

>Translated_132_residues
MDTLYSVTDLGRSLGITPRTIRFYEDKGLISPRRVGTTRVYTAKDRARMTLILRGKSLGFTLRDIKEFLDLYATDKTQVE
QITLLLAKVRQRVAQLEEQRQAVETSLRELRDIERQSLEALKAKGVNPHPQG
>Mature_132_residues
MDTLYSVTDLGRSLGITPRTIRFYEDKGLISPRRVGTTRVYTAKDRARMTLILRGKSLGFTLRDIKEFLDLYATDKTQVE
QITLLLAKVRQRVAQLEEQRQAVETSLRELRDIERQSLEALKAKGVNPHPQG

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15131; Mature: 15131

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLYSVTDLGRSLGITPRTIRFYEDKGLISPRRVGTTRVYTAKDRARMTLILRGKSLGF
CCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCC
TLRDIKEFLDLYATDKTQVEQITLLLAKVRQRVAQLEEQRQAVETSLRELRDIERQSLEA
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKAKGVNPHPQG
HHHCCCCCCCCC
>Mature Secondary Structure
MDTLYSVTDLGRSLGITPRTIRFYEDKGLISPRRVGTTRVYTAKDRARMTLILRGKSLGF
CCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCC
TLRDIKEFLDLYATDKTQVEQITLLLAKVRQRVAQLEEQRQAVETSLRELRDIERQSLEA
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKAKGVNPHPQG
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA