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The map label for this gene is 83592598

Identifier: 83592598

GI number: 83592598

Start: 1483060

End: 1484334

Strand: Reverse

Name: 83592598

Synonym: Rru_A1262

Alternate gene names: NA

Gene position: 1484334-1483060 (Counterclockwise)

Preceding gene: 83592599

Following gene: 83592597

Centisome position: 34.1

GC content: 60.55

Gene sequence:

>1275_bases
ATGCGATACCTGGTTTATGGCCTCTGTGCGTCCGCCTTGATTGCAACTACTGCGAGAGCAGAAACCATCACCATTCTCAT
GGAAAGCGTCCCTGACACCCAGTACGTCAAAACGCTGGTCCCGGACTTCGAAAAAGCCACCGGCATCACCGTCAATCTGG
AGGTGGTGAATTACGCCGAAATGCACACCAAGCTGGTTCCCCAGTTGGTCTCGCGCAAAGGCGGCTATTCGGCGATCGTC
GTCGACTTTTATTGGGTCGGCGAGTTCATCAAGGCCGGCTGGCTTCAGCCGCTGGACGAGCGCATCGGCGCCGATCACTT
CGATACGGCGCCCTATATCCCGGCGCTGATGGATCTGGTCGGCAAGGTCGACGGCACGACCTATATGCTGCCCTTCTATA
ATTACGCCATGGGCTTGACCTATCGCACCGATCTGCTGACCGATCCGGCCAATCAGAAGGCCTATGAGGCGGCCAACAAC
GCCCCCTTGCGCGCCCCCGAAACCTGGGACGAATACCGCAAACAGGTGGCCTTCTTCACCAAGGACGGCTTCAACGGCGT
GGTCAACCAGGGCTTGCGCCCCGATCCGATCGCCATGGAATGGTCGAACTACCTGTTCGCCAATGGCGGCAGCTTCCATG
ACGCCAATTGGAAATCGACCCTGAACAGCCCCGAGGCCAAGGCCGCCCTCGACCAGTACATCGAGTCGATCGACAAATAC
GGCCCCCTGGGCTCGGCCAGCTTCAGCTTCGACGAGGCCTTCAACGTCATGGCCCAGGGCAAGGCCTACAGCTACATCAC
CTATAACTTTTTCCGCACCTCGCTCGATAATCCCAGCCAGTCCTCGGTGGTCGGCAAGGCCGAGATCCTGCCCGTTCCCG
GAGTCACGCCCGAGACAAGCGGCAGCCTGAACGGCGCCTGGGGCTGGGGTATTCCCAAATCCAGCCCCAATCCCGATGCC
GCCTGGAAATTCCTGTCGTGGGTCGAGTCCTTCCCCATCGCCAAGGCCCGCGCCCTCCAAGGCGGGGCGCCGACGCGCTC
GGACGTTTTCGACGATGCCGAGGTTCTGGCGAAATACCCCTATTACCGCGACCTGAAGCGCCTGCTTGAGCGCAGCCACA
ACTTCCCGACCTTCACCTATACCCCGCAGTTCGTCGAGATCCTTGGCCGGGAACTGTCACTGGCCGTCGCCAAGGAAAAG
ACCTCCGAAGCCGCCTTGGCGACCGTCGCCAGCGAATTCGACGCCCTCGCCCTCAAGGACGGGAAGCAAAAGTGA

Upstream 100 bases:

>100_bases
CCTGCCATTATTGCGGAAGTACCTGATCAAGGGGCTTTCCCTGGGAGCCCTGAAGTAGCCTGCCGTCGTTTCGTCATCCG
TCTCATTGGGGAGTGCGAAG

Downstream 100 bases:

>100_bases
GCGGGGCGGCGGATCGTCCGATGACGGCTCTCGAACGGGCGGACCGCCGTTTCGGCTGGTTCCTCACCCTTCCCGGCGTG
CTTATGCTGGCGGCCACCAT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MRYLVYGLCASALIATTARAETITILMESVPDTQYVKTLVPDFEKATGITVNLEVVNYAEMHTKLVPQLVSRKGGYSAIV
VDFYWVGEFIKAGWLQPLDERIGADHFDTAPYIPALMDLVGKVDGTTYMLPFYNYAMGLTYRTDLLTDPANQKAYEAANN
APLRAPETWDEYRKQVAFFTKDGFNGVVNQGLRPDPIAMEWSNYLFANGGSFHDANWKSTLNSPEAKAALDQYIESIDKY
GPLGSASFSFDEAFNVMAQGKAYSYITYNFFRTSLDNPSQSSVVGKAEILPVPGVTPETSGSLNGAWGWGIPKSSPNPDA
AWKFLSWVESFPIAKARALQGGAPTRSDVFDDAEVLAKYPYYRDLKRLLERSHNFPTFTYTPQFVEILGRELSLAVAKEK
TSEAALATVASEFDALALKDGKQK

Sequences:

>Translated_424_residues
MRYLVYGLCASALIATTARAETITILMESVPDTQYVKTLVPDFEKATGITVNLEVVNYAEMHTKLVPQLVSRKGGYSAIV
VDFYWVGEFIKAGWLQPLDERIGADHFDTAPYIPALMDLVGKVDGTTYMLPFYNYAMGLTYRTDLLTDPANQKAYEAANN
APLRAPETWDEYRKQVAFFTKDGFNGVVNQGLRPDPIAMEWSNYLFANGGSFHDANWKSTLNSPEAKAALDQYIESIDKY
GPLGSASFSFDEAFNVMAQGKAYSYITYNFFRTSLDNPSQSSVVGKAEILPVPGVTPETSGSLNGAWGWGIPKSSPNPDA
AWKFLSWVESFPIAKARALQGGAPTRSDVFDDAEVLAKYPYYRDLKRLLERSHNFPTFTYTPQFVEILGRELSLAVAKEK
TSEAALATVASEFDALALKDGKQK
>Mature_424_residues
MRYLVYGLCASALIATTARAETITILMESVPDTQYVKTLVPDFEKATGITVNLEVVNYAEMHTKLVPQLVSRKGGYSAIV
VDFYWVGEFIKAGWLQPLDERIGADHFDTAPYIPALMDLVGKVDGTTYMLPFYNYAMGLTYRTDLLTDPANQKAYEAANN
APLRAPETWDEYRKQVAFFTKDGFNGVVNQGLRPDPIAMEWSNYLFANGGSFHDANWKSTLNSPEAKAALDQYIESIDKY
GPLGSASFSFDEAFNVMAQGKAYSYITYNFFRTSLDNPSQSSVVGKAEILPVPGVTPETSGSLNGAWGWGIPKSSPNPDA
AWKFLSWVESFPIAKARALQGGAPTRSDVFDDAEVLAKYPYYRDLKRLLERSHNFPTFTYTPQFVEILGRELSLAVAKEK
TSEAALATVASEFDALALKDGKQK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46949; Mature: 46949

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLVYGLCASALIATTARAETITILMESVPDTQYVKTLVPDFEKATGITVNLEVVNYAE
CCEEHHHHHHHHHHHHHCCHHEEEEHHHHCCCHHHHHHHCCCHHHHCCCEEEEEEECHHH
MHTKLVPQLVSRKGGYSAIVVDFYWVGEFIKAGWLQPLDERIGADHFDTAPYIPALMDLV
HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHH
GKVDGTTYMLPFYNYAMGLTYRTDLLTDPANQKAYEAANNAPLRAPETWDEYRKQVAFFT
HCCCCCEEEEEHHHHHHCCEEEHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHC
KDGFNGVVNQGLRPDPIAMEWSNYLFANGGSFHDANWKSTLNSPEAKAALDQYIESIDKY
CCCCCHHHHCCCCCCCCEEECCCEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHC
GPLGSASFSFDEAFNVMAQGKAYSYITYNFFRTSLDNPSQSSVVGKAEILPVPGVTPETS
CCCCCCCCCHHHHHHHHHCCCEEEEEEEEEHHHCCCCCCCCCCCCCEEEEECCCCCCCCC
GSLNGAWGWGIPKSSPNPDAAWKFLSWVESFPIAKARALQGGAPTRSDVFDDAEVLAKYP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHCCCHHHHHHCC
YYRDLKRLLERSHNFPTFTYTPQFVEILGRELSLAVAKEKTSEAALATVASEFDALALKD
CHHHHHHHHHHCCCCCEEEECHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GKQK
CCCC
>Mature Secondary Structure
MRYLVYGLCASALIATTARAETITILMESVPDTQYVKTLVPDFEKATGITVNLEVVNYAE
CCEEHHHHHHHHHHHHHCCHHEEEEHHHHCCCHHHHHHHCCCHHHHCCCEEEEEEECHHH
MHTKLVPQLVSRKGGYSAIVVDFYWVGEFIKAGWLQPLDERIGADHFDTAPYIPALMDLV
HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHH
GKVDGTTYMLPFYNYAMGLTYRTDLLTDPANQKAYEAANNAPLRAPETWDEYRKQVAFFT
HCCCCCEEEEEHHHHHHCCEEEHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHC
KDGFNGVVNQGLRPDPIAMEWSNYLFANGGSFHDANWKSTLNSPEAKAALDQYIESIDKY
CCCCCHHHHCCCCCCCCEEECCCEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHC
GPLGSASFSFDEAFNVMAQGKAYSYITYNFFRTSLDNPSQSSVVGKAEILPVPGVTPETS
CCCCCCCCCHHHHHHHHHCCCEEEEEEEEEHHHCCCCCCCCCCCCCEEEEECCCCCCCCC
GSLNGAWGWGIPKSSPNPDAAWKFLSWVESFPIAKARALQGGAPTRSDVFDDAEVLAKYP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHCCCHHHHHHCC
YYRDLKRLLERSHNFPTFTYTPQFVEILGRELSLAVAKEKTSEAALATVASEFDALALKD
CHHHHHHHHHHCCCCCEEEECHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GKQK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]