| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592592
Identifier: 83592592
GI number: 83592592
Start: 1477585
End: 1478109
Strand: Direct
Name: 83592592
Synonym: Rru_A1256
Alternate gene names: NA
Gene position: 1477585-1478109 (Clockwise)
Preceding gene: 83592587
Following gene: 83592593
Centisome position: 33.95
GC content: 67.43
Gene sequence:
>525_bases ATGACGACCGAGGTGTTTTTCCAACGCTGTCCGCGGGTTTTGTGGCAGGGCGACGCCCTGGCCCCCCCCTTGGCCCGTCT TCCCCTGCGGGCGGGCTACATCGTGTTTGGCGATCTGCGGGCCTGCCTGGATTTGGGGCCGGAGTTCTTCAAGGCCGCCC ATGACCGTCTGGCCCAGGCGCTGGCCGTCCCGGGATTGTCGAAAGGCAAGACCCACGAGGCGCGCTGCCGGGATTTCCTG GGCGAGCCCTATGACAGCTGGAACGTCGCCCACGGCACCGTCGATCGTTTCCTCAAGGCCCGCTTCAGCCTGATCGAGGT GATGGTCGCCCTGGTCGAGGATCAGGTGGCGACGGCCCGCCGCGCCGCCGAGGAGGCCAGTTTGCTATCCAAGCTGCTGC GCGCCCCCGACGGCGCCCTGGAAGAGGCCGTCCGCGCCCTGCCTTTGGCCATTGACGAACTCAACGCCCGTTTTGAAGAC GCCAAGGCCGGGCTGATCTATCGCGACGGCGCCCTGCACGCGTAG
Upstream 100 bases:
>100_bases CATCCGCCGCCCATGGTCCAGAGACGCCCGGTGGCGCGGGGCGGAGGGGGCGTTTATAAAAGGGACCGGCCCAGCGCCGT TTTTTCAGGAGGGGGAGGGA
Downstream 100 bases:
>100_bases GGCAACAAATCCGAGTTACTGTGGATTTAATTCGATGATTGAGGCGAGATAGTCGAGGTTCTATCCGGCGACTTTTCGTC TTCGTTTGATGCTCTTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTTEVFFQRCPRVLWQGDALAPPLARLPLRAGYIVFGDLRACLDLGPEFFKAAHDRLAQALAVPGLSKGKTHEARCRDFL GEPYDSWNVAHGTVDRFLKARFSLIEVMVALVEDQVATARRAAEEASLLSKLLRAPDGALEEAVRALPLAIDELNARFED AKAGLIYRDGALHA
Sequences:
>Translated_174_residues MTTEVFFQRCPRVLWQGDALAPPLARLPLRAGYIVFGDLRACLDLGPEFFKAAHDRLAQALAVPGLSKGKTHEARCRDFL GEPYDSWNVAHGTVDRFLKARFSLIEVMVALVEDQVATARRAAEEASLLSKLLRAPDGALEEAVRALPLAIDELNARFED AKAGLIYRDGALHA >Mature_173_residues TTEVFFQRCPRVLWQGDALAPPLARLPLRAGYIVFGDLRACLDLGPEFFKAAHDRLAQALAVPGLSKGKTHEARCRDFLG EPYDSWNVAHGTVDRFLKARFSLIEVMVALVEDQVATARRAAEEASLLSKLLRAPDGALEEAVRALPLAIDELNARFEDA KAGLIYRDGALHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19140; Mature: 19009
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEVFFQRCPRVLWQGDALAPPLARLPLRAGYIVFGDLRACLDLGPEFFKAAHDRLAQA CCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH LAVPGLSKGKTHEARCRDFLGEPYDSWNVAHGTVDRFLKARFSLIEVMVALVEDQVATAR HHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAEEASLLSKLLRAPDGALEEAVRALPLAIDELNARFEDAKAGLIYRDGALHA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCC >Mature Secondary Structure TTEVFFQRCPRVLWQGDALAPPLARLPLRAGYIVFGDLRACLDLGPEFFKAAHDRLAQA CHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH LAVPGLSKGKTHEARCRDFLGEPYDSWNVAHGTVDRFLKARFSLIEVMVALVEDQVATAR HHCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAEEASLLSKLLRAPDGALEEAVRALPLAIDELNARFEDAKAGLIYRDGALHA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA