| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592586
Identifier: 83592586
GI number: 83592586
Start: 1470766
End: 1471782
Strand: Direct
Name: 83592586
Synonym: Rru_A1250
Alternate gene names: NA
Gene position: 1470766-1471782 (Clockwise)
Preceding gene: 83592564
Following gene: 83592587
Centisome position: 33.79
GC content: 66.18
Gene sequence:
>1017_bases ATGACCCGATCCCTGATCCTTCTCTGCGCGGTTTTTTGGCTGATCGCCGCGCCGGCCGACGCCCGGACCATGCCCGAGCT GGAGCGGATTCTTGACCGCGCGGCACAATTCGGCGCGCTTGAAACCGTGATCATCGCCCAGGGCGGTCATACTCTGGCCG AGCGCGGGTATCATGGTCATTCCCCGGGGGCGCCGACCAATATCAAATCGGCCTCGAAATCGGTGATGTCGGCTTTGGTC GGCATCGCCATCGACAAGGGCGTGCTAAGCGGCACCGATCAGAAAATCGCCCCGCTGCTCGCCGGCGATCTGCCCGCCGA TCCCGACCCGCGACTGGCCGAGATCACCATTGGCAATCTTTTATCGATGCAGGCTGGTCTGGGCCGCACCTCCGGTCCCT TTTACGGGCGCTGGGTCGCCAGCGCCAATTGGGTGCGCGCCGCCCTGGCCCGGCCCTTCGCCGATGATCCGGGGGGGCGG ATGCTTTATTCCACCGGATCGAGCCACCTGCTTTCGGCCATCCTGACGCGGACCACCGGGCGTTCGACCCTGGCCCTGGC CCGGGATTGGCTAGGCGCCCAGCCGGGCTTTGCCGTATCCGGCTGGGATCGCGACCCCCAGGGGATCTATTTCGGCGGCA ATCAGATGGCGATGAGCCCGCGCGCCCTGCTGGCCTTTGGCGAGCTTTACCGGACGCGGGGCAAAACCGCCGAGGGCCGT CACGTGATCCCGGCCGCTTGGATCGACCAGTCGTGGACTTGGCGGACGCGATCGGAATTCACCGGCGATGGCTATGGTTA TGGTTGGTTCCTGCGGCCGATCTCCGGCGAGGAGGTGCGCTATGCCTGGGGCTACGGCGGGCAGATGCTTTACCTCGTGC CGTCGCTGGACCTCACCGTCGTCATGACTTCGGATGAGACCAGCCCGTCGGCGCGGAGCGGTCATCGCGACACTCTTCAC GGCCTGCTGGCCGAGATCATCGGGGCGCTGCGGGCCGAGGATCCCCTCGCACGGTAA
Upstream 100 bases:
>100_bases ACAAAAATTCTTATCTCGATTCAAAGCCTTGGAGCGGCGATGGCGCGGAAGGGCGGTGCTTGGCGTTCCGCTTACGGCTC TGTCCTCTTAAATCGGGGGA
Downstream 100 bases:
>100_bases ATCAGGCCTTTTGGCCAGGACGCCAAAGGCGTATACCCGCCGCCCGCCGTTTGGCGGGGCGGACCAGTGGACGATAAGAA GGGACGAATCGTGCGTCGCA
Product: beta-lactamase
Products: NA
Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; Beta-Lactamase Family Protein; Beta-Lactamase Class C; Membrane Or Secreted Beta-Lactamase Family Protein; Exported 6-Aminohexanoate-Dimer Hydrolase Protein; Secreted Beta-Lactamase Family Protein; Beta-Lactamase Class C-Like Protein; 6-Aminohexanoate-Dimer Hydrolase Protein; Hydrolase Transmembrane Protein; Beta-Lactamase-Like Hydrolase
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTRSLILLCAVFWLIAAPADARTMPELERILDRAAQFGALETVIIAQGGHTLAERGYHGHSPGAPTNIKSASKSVMSALV GIAIDKGVLSGTDQKIAPLLAGDLPADPDPRLAEITIGNLLSMQAGLGRTSGPFYGRWVASANWVRAALARPFADDPGGR MLYSTGSSHLLSAILTRTTGRSTLALARDWLGAQPGFAVSGWDRDPQGIYFGGNQMAMSPRALLAFGELYRTRGKTAEGR HVIPAAWIDQSWTWRTRSEFTGDGYGYGWFLRPISGEEVRYAWGYGGQMLYLVPSLDLTVVMTSDETSPSARSGHRDTLH GLLAEIIGALRAEDPLAR
Sequences:
>Translated_338_residues MTRSLILLCAVFWLIAAPADARTMPELERILDRAAQFGALETVIIAQGGHTLAERGYHGHSPGAPTNIKSASKSVMSALV GIAIDKGVLSGTDQKIAPLLAGDLPADPDPRLAEITIGNLLSMQAGLGRTSGPFYGRWVASANWVRAALARPFADDPGGR MLYSTGSSHLLSAILTRTTGRSTLALARDWLGAQPGFAVSGWDRDPQGIYFGGNQMAMSPRALLAFGELYRTRGKTAEGR HVIPAAWIDQSWTWRTRSEFTGDGYGYGWFLRPISGEEVRYAWGYGGQMLYLVPSLDLTVVMTSDETSPSARSGHRDTLH GLLAEIIGALRAEDPLAR >Mature_337_residues TRSLILLCAVFWLIAAPADARTMPELERILDRAAQFGALETVIIAQGGHTLAERGYHGHSPGAPTNIKSASKSVMSALVG IAIDKGVLSGTDQKIAPLLAGDLPADPDPRLAEITIGNLLSMQAGLGRTSGPFYGRWVASANWVRAALARPFADDPGGRM LYSTGSSHLLSAILTRTTGRSTLALARDWLGAQPGFAVSGWDRDPQGIYFGGNQMAMSPRALLAFGELYRTRGKTAEGRH VIPAAWIDQSWTWRTRSEFTGDGYGYGWFLRPISGEEVRYAWGYGGQMLYLVPSLDLTVVMTSDETSPSARSGHRDTLHG LLAEIIGALRAEDPLAR
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36381; Mature: 36250
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSLILLCAVFWLIAAPADARTMPELERILDRAAQFGALETVIIAQGGHTLAERGYHGH CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCC SPGAPTNIKSASKSVMSALVGIAIDKGVLSGTDQKIAPLLAGDLPADPDPRLAEITIGNL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEHHHH LSMQAGLGRTSGPFYGRWVASANWVRAALARPFADDPGGRMLYSTGSSHLLSAILTRTTG HHHHHCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCC RSTLALARDWLGAQPGFAVSGWDRDPQGIYFGGNQMAMSPRALLAFGELYRTRGKTAEGR CHHHHHHHHHCCCCCCCEECCCCCCCCCEEECCCEEECCHHHHHHHHHHHHHCCCCCCCC HVIPAAWIDQSWTWRTRSEFTGDGYGYGWFLRPISGEEVRYAWGYGGQMLYLVPSLDLTV EECCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCEEE VMTSDETSPSARSGHRDTLHGLLAEIIGALRAEDPLAR EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TRSLILLCAVFWLIAAPADARTMPELERILDRAAQFGALETVIIAQGGHTLAERGYHGH CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCC SPGAPTNIKSASKSVMSALVGIAIDKGVLSGTDQKIAPLLAGDLPADPDPRLAEITIGNL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEHHHH LSMQAGLGRTSGPFYGRWVASANWVRAALARPFADDPGGRMLYSTGSSHLLSAILTRTTG HHHHHCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCC RSTLALARDWLGAQPGFAVSGWDRDPQGIYFGGNQMAMSPRALLAFGELYRTRGKTAEGR CHHHHHHHHHCCCCCCCEECCCCCCCCCEEECCCEEECCHHHHHHHHHHHHHCCCCCCCC HVIPAAWIDQSWTWRTRSEFTGDGYGYGWFLRPISGEEVRYAWGYGGQMLYLVPSLDLTV EECCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCEEE VMTSDETSPSARSGHRDTLHGLLAEIIGALRAEDPLAR EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA