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The map label for this gene is 83592579

Identifier: 83592579

GI number: 83592579

Start: 1465635

End: 1466303

Strand: Reverse

Name: 83592579

Synonym: Rru_A1243

Alternate gene names: NA

Gene position: 1466303-1465635 (Counterclockwise)

Preceding gene: 83592580

Following gene: 83592578

Centisome position: 33.69

GC content: 64.28

Gene sequence:

>669_bases
ATGACTATCCCCACCCCCCTTGCCGAACCGGCGGCGCCCAATGAAATCGCCGTTTGGGATCTGTTGGTCCGCCTTGCCCA
CTGGAGCGTCGTCATCGCCTTCGCCATCGCCTACCTGAGCGAAGACGACGCGCTGACCCTTCATACCGTCGCCGGCTATG
CCATCGCCCTGATCGTCAGCCTGCGGGTGATCTGGGGCTTTATCGGTTCGCCCCATGCCCGCTTCAGCGATTTCGTCAAA
CGCCCGGCCGAGGTGATCGCCTATTTGCGCAGTGTGCCATCGGGCACGGGCAAGCGTTTCATCGGCCATAACCCGGCTGG
CGGCGCCATGGCCGTGGCTTTGCTTCTTGGCCTAGCCGCGACCACCCTCAGCGGCATGGCGACCCTGGCCGAGCAAAAGC
ACCAGGGACCGCTGGCGCCTTTCTACAGCGTCAGCGCCCCGGCCACCGCCGGAGTATCGATCATCGCCCCCGCCCGCGCC
GATGACGACGGCGACGCCAGGAGGGGCGGCGAACACCGCAAAAAAAGTGCTGCCAAGGAAGTCCACGAGTTTTTCGCCAA
TGCCATGCTCGTCCTCATCGCCCTTCATCTCACCGGCGTGGTTCTCTCCAGCCGCGGCCATCATGAGAATTTGATCCGGG
CGATGATCACCGGCCGCAAGCGCCCCTAA

Upstream 100 bases:

>100_bases
CACCGGATGAAGCGCGATCAACCGGCGCGGGCGGGTCGGCCGTCCGTTCGGACAAGCCCATTGACGGGCAAGCGTTCGAG
CACGCGGGAGATCCTAGCCC

Downstream 100 bases:

>100_bases
AGGCGGCGCCGTGGCCGGACGGGGCGGCCGAGGGAGCGACCGGGCGGCGCCCCTCGGCCGATAGCCCTTTTCCGAAGGCG
ACAGCTCCGACTCGACAGCA

Product: cytochrome B561

Products: NA

Alternate protein names: Cytochrome; Cytochrome B/B6 Domain; Nickel-Dependent Hydrogenase Cytochrome B Subunit; Hydrogenase Cytochrome B-Type Subunit Protein; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Cytochrome B Oxidoreductase Protein; Hydrogenase Cytochrome B-Type Subunit; Cytochrome C Family Protein; B-Type Cytochrome; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTIPTPLAEPAAPNEIAVWDLLVRLAHWSVVIAFAIAYLSEDDALTLHTVAGYAIALIVSLRVIWGFIGSPHARFSDFVK
RPAEVIAYLRSVPSGTGKRFIGHNPAGGAMAVALLLGLAATTLSGMATLAEQKHQGPLAPFYSVSAPATAGVSIIAPARA
DDDGDARRGGEHRKKSAAKEVHEFFANAMLVLIALHLTGVVLSSRGHHENLIRAMITGRKRP

Sequences:

>Translated_222_residues
MTIPTPLAEPAAPNEIAVWDLLVRLAHWSVVIAFAIAYLSEDDALTLHTVAGYAIALIVSLRVIWGFIGSPHARFSDFVK
RPAEVIAYLRSVPSGTGKRFIGHNPAGGAMAVALLLGLAATTLSGMATLAEQKHQGPLAPFYSVSAPATAGVSIIAPARA
DDDGDARRGGEHRKKSAAKEVHEFFANAMLVLIALHLTGVVLSSRGHHENLIRAMITGRKRP
>Mature_221_residues
TIPTPLAEPAAPNEIAVWDLLVRLAHWSVVIAFAIAYLSEDDALTLHTVAGYAIALIVSLRVIWGFIGSPHARFSDFVKR
PAEVIAYLRSVPSGTGKRFIGHNPAGGAMAVALLLGLAATTLSGMATLAEQKHQGPLAPFYSVSAPATAGVSIIAPARAD
DDGDARRGGEHRKKSAAKEVHEFFANAMLVLIALHLTGVVLSSRGHHENLIRAMITGRKRP

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23550; Mature: 23418

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPTPLAEPAAPNEIAVWDLLVRLAHWSVVIAFAIAYLSEDDALTLHTVAGYAIALIVS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
LRVIWGFIGSPHARFSDFVKRPAEVIAYLRSVPSGTGKRFIGHNPAGGAMAVALLLGLAA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
TTLSGMATLAEQKHQGPLAPFYSVSAPATAGVSIIAPARADDDGDARRGGEHRKKSAAKE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHH
VHEFFANAMLVLIALHLTGVVLSSRGHHENLIRAMITGRKRP
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TIPTPLAEPAAPNEIAVWDLLVRLAHWSVVIAFAIAYLSEDDALTLHTVAGYAIALIVS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
LRVIWGFIGSPHARFSDFVKRPAEVIAYLRSVPSGTGKRFIGHNPAGGAMAVALLLGLAA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
TTLSGMATLAEQKHQGPLAPFYSVSAPATAGVSIIAPARADDDGDARRGGEHRKKSAAKE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHH
VHEFFANAMLVLIALHLTGVVLSSRGHHENLIRAMITGRKRP
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA