Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

Click here to switch to the map view.

The map label for this gene is nadD [H]

Identifier: 83592573

GI number: 83592573

Start: 1459966

End: 1460646

Strand: Reverse

Name: nadD [H]

Synonym: Rru_A1237

Alternate gene names: 83592573

Gene position: 1460646-1459966 (Counterclockwise)

Preceding gene: 83592574

Following gene: 83592572

Centisome position: 33.56

GC content: 69.46

Gene sequence:

>681_bases
GTGACGGCGCGCCGCGGGGAACCCGCCCTGGGCAAGGCCCAGGCCCCCTCGCCCTGGGGCGATGGCCGACGCTCGCGCAT
CGGCCTGCTTGGCGGATCATTCAACCCCGCCCACCAGGGCCATCTGCATATCAGCAAACAGGCCCTGGCCCGTTTGCGCC
TGGACGCCGTGTGGTGGCTGGTCACGCCCCAGAACCCCTTGAAGGCCGCGCGGGGAGTGGCGCCCTTGGCGGCGCGACTG
GCCTCGGCCCGCGCCGTTTGCGCCCGCGAACGCCATATCCTGCCGCTCGCCCTGGAAACCGCCTTTGGCACGACGCGGAC
GGCCGACACCCTTGATATCCTCCATCGCCGCTTCCCGCGCGCCCGCTTCGTCTGGCTGATGGGAGCCGATAATCTGGCCC
AATTGCCCAGTTGGCACCGCTGGCGCCACTTGGCGGCCACGACGCCCATTGCGATTCTCGATCGGGCACCGTATTCTAAA
GAAGCCCTGGCGGGATTGGCGGCACGTCGCCTTGCCCGCTTCAGGCATCCGGCGCGAATCGCCGGCGTGCTGGCGGACCG
GGCACCGCCAGCCTGGGTGTTCCTACCCATTCGGAAACATGCCGCCTCGGCCACCGCAATCCGCGCCCGAGGATGGACCG
TTTCCGGCCCCGTCCCAACCGATGGAGAGGGCAATCTCTAG

Upstream 100 bases:

>100_bases
CCGGGGACCGGTCGGCGTCGAGCAACTGACCATCTTCAAATACAAGGTTCGCGGCACCGGCCAAACCAGACCATGACGGT
CGCCCCATGAAGGTCAGGTC

Downstream 100 bases:

>100_bases
TCCCCTGCTAACGCCGCTCGACCCGGCCAAATTGGCCGAAATCGTTGAAACCGCCTTGGATGAAGACAAAGCCGAGGAGA
TCGTCGTCATCGACCTTGCT

Product: cytidylyltransferase

Products: NA

Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTARRGEPALGKAQAPSPWGDGRRSRIGLLGGSFNPAHQGHLHISKQALARLRLDAVWWLVTPQNPLKAARGVAPLAARL
ASARAVCARERHILPLALETAFGTTRTADTLDILHRRFPRARFVWLMGADNLAQLPSWHRWRHLAATTPIAILDRAPYSK
EALAGLAARRLARFRHPARIAGVLADRAPPAWVFLPIRKHAASATAIRARGWTVSGPVPTDGEGNL

Sequences:

>Translated_226_residues
MTARRGEPALGKAQAPSPWGDGRRSRIGLLGGSFNPAHQGHLHISKQALARLRLDAVWWLVTPQNPLKAARGVAPLAARL
ASARAVCARERHILPLALETAFGTTRTADTLDILHRRFPRARFVWLMGADNLAQLPSWHRWRHLAATTPIAILDRAPYSK
EALAGLAARRLARFRHPARIAGVLADRAPPAWVFLPIRKHAASATAIRARGWTVSGPVPTDGEGNL
>Mature_225_residues
TARRGEPALGKAQAPSPWGDGRRSRIGLLGGSFNPAHQGHLHISKQALARLRLDAVWWLVTPQNPLKAARGVAPLAARLA
SARAVCARERHILPLALETAFGTTRTADTLDILHRRFPRARFVWLMGADNLAQLPSWHRWRHLAATTPIAILDRAPYSKE
ALAGLAARRLARFRHPARIAGVLADRAPPAWVFLPIRKHAASATAIRARGWTVSGPVPTDGEGNL

Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]

COG id: COG1057

COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nadD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004821
- InterPro:   IPR004820
- InterPro:   IPR005248
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01467 CTP_transf_2 [H]

EC number: =2.7.7.18 [H]

Molecular weight: Translated: 24654; Mature: 24523

Theoretical pI: Translated: 12.42; Mature: 12.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARRGEPALGKAQAPSPWGDGRRSRIGLLGGSFNPAHQGHLHISKQALARLRLDAVWWL
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHEEEEEE
VTPQNPLKAARGVAPLAARLASARAVCARERHILPLALETAFGTTRTADTLDILHRRFPR
ECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCCCHHHHHHHHHHCCC
ARFVWLMGADNLAQLPSWHRWRHLAATTPIAILDRAPYSKEALAGLAARRLARFRHPARI
EEEEEEECCCCHHHCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHH
AGVLADRAPPAWVFLPIRKHAASATAIRARGWTVSGPVPTDGEGNL
HHHHHCCCCCCEEEEECHHHCCCHHEEEECCEEECCCCCCCCCCCC
>Mature Secondary Structure 
TARRGEPALGKAQAPSPWGDGRRSRIGLLGGSFNPAHQGHLHISKQALARLRLDAVWWL
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHEEEEEE
VTPQNPLKAARGVAPLAARLASARAVCARERHILPLALETAFGTTRTADTLDILHRRFPR
ECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCCCHHHHHHHHHHCCC
ARFVWLMGADNLAQLPSWHRWRHLAATTPIAILDRAPYSKEALAGLAARRLARFRHPARI
EEEEEEECCCCHHHCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHH
AGVLADRAPPAWVFLPIRKHAASATAIRARGWTVSGPVPTDGEGNL
HHHHHCCCCCCEEEEECHHHCCCHHEEEECCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA