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The map label for this gene is mcp4 [H]

Identifier: 83592513

GI number: 83592513

Start: 1392996

End: 1394405

Strand: Direct

Name: mcp4 [H]

Synonym: Rru_A1177

Alternate gene names: 83592513

Gene position: 1392996-1394405 (Clockwise)

Preceding gene: 83592512

Following gene: 83592514

Centisome position: 32.0

GC content: 65.25

Gene sequence:

>1410_bases
ATGACCGGATTTCTTCAAAACGCCGATTCCCGTGGTCCGGGCGAAAAATCGGGTGGTCAATACTATGCGGCGGCCGTCGC
CTCTCTTGGCCGGAGACTGGAGACCTTCAAGGTTAGCGAGGCGGATCTTGCCATTCTCGGAGACCTCGCTCCGTTTATTC
GCGTAGAACTGCCGGGATTGCTTGAGCGGTGGCACGGGCGTTTCGCCCAATGGCCGGAACTGGCCAGCGCCCTGCGCCTG
CCCGAAGTTCACAAGGCGCGCACCGCCCATTGGGTGCGGGTCGCCTCGGGGGATCTGGGCGAGGGGTTTCTTGACTCCGC
CCATACCCTGGCCGCCGTGTTCTATGCCAACGGCGTTCCCGGCTATGCGGTGTCGATCTGCCACGCCACGGTGCTTCAGG
AATTGATCGAGGCCCTCGGCCAACGGCCGACCAGCGGCGTCGATTTTGGTGGGCGCAAGCGGGCCCAGGCGGCCATGATC
CGCGCCGCGCTCAACAAGATCGCCTGGCTTGATATCGAAATCCTGCTTGAAACCTATGCCACGGCCGAGAAGGAAGCCCG
CAGCGCCACCTTCCGTCATCTCGCCGATGCCTTCGAAAAGACGGTGCATGTGGTGGTGGGCAATGTCGGCGAGGCCACCC
ATCAGTTGGGCGGCATTGTCGATACCCTGGCGCAAACCGCCGACCGCTCGACCCGGGCTTCGGGATCGGTGTCCACGGCG
GCCGAAGAGGCCTCGGGCAATGTCGCCATGGTCGCCGCCTCGGCCGAGGAACTGGAAAGCTCGATCCGCGAAATCTCCGC
CCAGGTCTCGACCGCCAACGGCGTGGCCGAACGCGCCGTCGAACGGGCGCGCAACACCACGGCCACCGTTGATTCCCTGG
CCGGCACCGTCGCCAAGATCGGCACCGTCATCGATCTGATCAGCGGCATCGCCGCCCAAACCAACCTGCTGGCGCTCAAT
GCGACGATCGAGGCGGCCCGGGCGGGGGATGCCGGCAAGGGCTTCGCCGTGGTCGCCAATGAGGTCAAGGCCCTGGCCAA
TCAAACGGCGCGGGCCACCGAAGAGATTTCCAAGCAGATCAAGGACATGGAAGAGGTGACCCATACGGCGGTGTCGAGCA
TCGGCGAAATCGCCGGGGTTATCGACACCATCAGCGCCGCCACGGTGGCCATCACCGCGGCGGTCGAGCAGCAATCGGCC
TCGACCCGCGAAATCGCCCGCAGCACCCAGGTGGTCGCCGATGGCAATGGTCAGGTCAGCCGGCTGATCGGCGAGGTGCG
CGACGGCGCCGAGCAAACCCTGACCCTGGCCGATGCGGTTTCCAAGGCCACGAACGTGCTTGGCGAACAATCAACGACGC
TCCGCGACGCCGTCGAGTCCTTCCTTCAGGACGTGCGCTCGGCCGCCTGA

Upstream 100 bases:

>100_bases
CTGCGTCATCCTTGTCTCGGCGAGGCAGCGCCGTTAGGCAATCCATCAGTCCATGGGCTCGTATACCCTGGTATAGAAAA
CTCATGGGATCGAGAAAGAT

Downstream 100 bases:

>100_bases
CCCTTGGCGGGCGGCCGGCCTACGCTCCGGCCGCTCGCTTGCGGGGTCGCGCGGTTGACGCCCGTCGTCGCCGGGCCTAT
CGTCGGTGCCATGACCCAGA

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MTGFLQNADSRGPGEKSGGQYYAAAVASLGRRLETFKVSEADLAILGDLAPFIRVELPGLLERWHGRFAQWPELASALRL
PEVHKARTAHWVRVASGDLGEGFLDSAHTLAAVFYANGVPGYAVSICHATVLQELIEALGQRPTSGVDFGGRKRAQAAMI
RAALNKIAWLDIEILLETYATAEKEARSATFRHLADAFEKTVHVVVGNVGEATHQLGGIVDTLAQTADRSTRASGSVSTA
AEEASGNVAMVAASAEELESSIREISAQVSTANGVAERAVERARNTTATVDSLAGTVAKIGTVIDLISGIAAQTNLLALN
ATIEAARAGDAGKGFAVVANEVKALANQTARATEEISKQIKDMEEVTHTAVSSIGEIAGVIDTISAATVAITAAVEQQSA
STREIARSTQVVADGNGQVSRLIGEVRDGAEQTLTLADAVSKATNVLGEQSTTLRDAVESFLQDVRSAA

Sequences:

>Translated_469_residues
MTGFLQNADSRGPGEKSGGQYYAAAVASLGRRLETFKVSEADLAILGDLAPFIRVELPGLLERWHGRFAQWPELASALRL
PEVHKARTAHWVRVASGDLGEGFLDSAHTLAAVFYANGVPGYAVSICHATVLQELIEALGQRPTSGVDFGGRKRAQAAMI
RAALNKIAWLDIEILLETYATAEKEARSATFRHLADAFEKTVHVVVGNVGEATHQLGGIVDTLAQTADRSTRASGSVSTA
AEEASGNVAMVAASAEELESSIREISAQVSTANGVAERAVERARNTTATVDSLAGTVAKIGTVIDLISGIAAQTNLLALN
ATIEAARAGDAGKGFAVVANEVKALANQTARATEEISKQIKDMEEVTHTAVSSIGEIAGVIDTISAATVAITAAVEQQSA
STREIARSTQVVADGNGQVSRLIGEVRDGAEQTLTLADAVSKATNVLGEQSTTLRDAVESFLQDVRSAA
>Mature_468_residues
TGFLQNADSRGPGEKSGGQYYAAAVASLGRRLETFKVSEADLAILGDLAPFIRVELPGLLERWHGRFAQWPELASALRLP
EVHKARTAHWVRVASGDLGEGFLDSAHTLAAVFYANGVPGYAVSICHATVLQELIEALGQRPTSGVDFGGRKRAQAAMIR
AALNKIAWLDIEILLETYATAEKEARSATFRHLADAFEKTVHVVVGNVGEATHQLGGIVDTLAQTADRSTRASGSVSTAA
EEASGNVAMVAASAEELESSIREISAQVSTANGVAERAVERARNTTATVDSLAGTVAKIGTVIDLISGIAAQTNLLALNA
TIEAARAGDAGKGFAVVANEVKALANQTARATEEISKQIKDMEEVTHTAVSSIGEIAGVIDTISAATVAITAAVEQQSAS
TREIARSTQVVADGNGQVSRLIGEVRDGAEQTLTLADAVSKATNVLGEQSTTLRDAVESFLQDVRSAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=268, Percent_Identity=30.5970149253731, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1788194, Length=291, Percent_Identity=29.2096219931272, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789453, Length=224, Percent_Identity=31.25, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1788195, Length=195, Percent_Identity=31.7948717948718, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI2367378, Length=166, Percent_Identity=36.7469879518072, Blast_Score=85, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 48994; Mature: 48863

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGFLQNADSRGPGEKSGGQYYAAAVASLGRRLETFKVSEADLAILGDLAPFIRVELPGL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHH
LERWHGRFAQWPELASALRLPEVHKARTAHWVRVASGDLGEGFLDSAHTLAAVFYANGVP
HHHHCCCCCCCHHHHHHHCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
GYAVSICHATVLQELIEALGQRPTSGVDFGGRKRAQAAMIRAALNKIAWLDIEILLETYA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAEKEARSATFRHLADAFEKTVHVVVGNVGEATHQLGGIVDTLAQTADRSTRASGSVSTA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
AEEASGNVAMVAASAEELESSIREISAQVSTANGVAERAVERARNTTATVDSLAGTVAKI
HHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GTVIDLISGIAAQTNLLALNATIEAARAGDAGKGFAVVANEVKALANQTARATEEISKQI
HHHHHHHHHHHHHHHEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KDMEEVTHTAVSSIGEIAGVIDTISAATVAITAAVEQQSASTREIARSTQVVADGNGQVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCCHHH
RLIGEVRDGAEQTLTLADAVSKATNVLGEQSTTLRDAVESFLQDVRSAA
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGFLQNADSRGPGEKSGGQYYAAAVASLGRRLETFKVSEADLAILGDLAPFIRVELPGL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHH
LERWHGRFAQWPELASALRLPEVHKARTAHWVRVASGDLGEGFLDSAHTLAAVFYANGVP
HHHHCCCCCCCHHHHHHHCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
GYAVSICHATVLQELIEALGQRPTSGVDFGGRKRAQAAMIRAALNKIAWLDIEILLETYA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAEKEARSATFRHLADAFEKTVHVVVGNVGEATHQLGGIVDTLAQTADRSTRASGSVSTA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
AEEASGNVAMVAASAEELESSIREISAQVSTANGVAERAVERARNTTATVDSLAGTVAKI
HHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GTVIDLISGIAAQTNLLALNATIEAARAGDAGKGFAVVANEVKALANQTARATEEISKQI
HHHHHHHHHHHHHHHEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KDMEEVTHTAVSSIGEIAGVIDTISAATVAITAAVEQQSASTREIARSTQVVADGNGQVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCCHHH
RLIGEVRDGAEQTLTLADAVSKATNVLGEQSTTLRDAVESFLQDVRSAA
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]