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The map label for this gene is hupF [H]

Identifier: 83592501

GI number: 83592501

Start: 1382694

End: 1383065

Strand: Direct

Name: hupF [H]

Synonym: Rru_A1165

Alternate gene names: 83592501

Gene position: 1382694-1383065 (Clockwise)

Preceding gene: 83592500

Following gene: 83592502

Centisome position: 31.77

GC content: 68.82

Gene sequence:

>372_bases
ATGTGCATCGGATACCCCATGCGGATCGAGGCGCTTAATCCCGACGCCAGCTTCGGCTTGGCCCGCCGGGCGCCGCGAGA
ACGGTTGGAGCGCATCGATTTGCGCCTCGTCGGGCCGGTCGAGGAAGGGCAATGGGTTCTGGTCTTTCTGGGCACGGCGC
GCAGCCTGCTTGACGACGGCGAGGCGGCGCGGCTGACCGATGCCCTGGCGGCGCTTGACGCCGTGGTGCGCGGCGAGACG
GTCGATCACCTGTTTGCCGATCTGACCAGCCGCGAGCCCGAGCTTCCGGCCTTTCTCCGGCCCGCCGCTCCCGCCCCTCC
GGTCGCCAAGCCCGGTGGCGCGGCGGCCAAAATCCTGAAACTGGTCAATTGA

Upstream 100 bases:

>100_bases
TGGCCTGTCGGCCGCGCCCGGCGGCGCCGGCGGCCGGCCTGCTGGGGTTCGGCCTGTCAAGCTCGGCCTATGAACAGCGT
TAAGCGGGGAGGGAGGGGTT

Downstream 100 bases:

>100_bases
TCGGGAGTGCATCGCCATGGCCTTCGCTCATTTCGCGGGATCGGCTTCGGGGGGGGATTCGGCGGCCGAGCGCGCTTTGC
GCGCCTTGTTCGCCGGCTGT

Product: hydrogenase expression/formation protein (HUPF/HYPC)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MCIGYPMRIEALNPDASFGLARRAPRERLERIDLRLVGPVEEGQWVLVFLGTARSLLDDGEAARLTDALAALDAVVRGET
VDHLFADLTSREPELPAFLRPAAPAPPVAKPGGAAAKILKLVN

Sequences:

>Translated_123_residues
MCIGYPMRIEALNPDASFGLARRAPRERLERIDLRLVGPVEEGQWVLVFLGTARSLLDDGEAARLTDALAALDAVVRGET
VDHLFADLTSREPELPAFLRPAAPAPPVAKPGGAAAKILKLVN
>Mature_123_residues
MCIGYPMRIEALNPDASFGLARRAPRERLERIDLRLVGPVEEGQWVLVFLGTARSLLDDGEAARLTDALAALDAVVRGET
VDHLFADLTSREPELPAFLRPAAPAPPVAKPGGAAAKILKLVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 13207; Mature: 13207

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIGYPMRIEALNPDASFGLARRAPRERLERIDLRLVGPVEEGQWVLVFLGTARSLLDDG
CCCCCCCEEEEECCCCCCCHHHCCHHHHHHHCCEEEECCCCCCCEEEEEECCHHHHHCCC
EAARLTDALAALDAVVRGETVDHLFADLTSREPELPAFLRPAAPAPPVAKPGGAAAKILK
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCHHHHHHH
LVN
HCC
>Mature Secondary Structure
MCIGYPMRIEALNPDASFGLARRAPRERLERIDLRLVGPVEEGQWVLVFLGTARSLLDDG
CCCCCCCEEEEECCCCCCCHHHCCHHHHHHHCCEEEECCCCCCCEEEEEECCHHHHHCCC
EAARLTDALAALDAVVRGETVDHLFADLTSREPELPAFLRPAAPAPPVAKPGGAAAKILK
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCHHHHHHH
LVN
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1597428 [H]