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The map label for this gene is mcp4 [H]

Identifier: 83592496

GI number: 83592496

Start: 1376309

End: 1377988

Strand: Reverse

Name: mcp4 [H]

Synonym: Rru_A1160

Alternate gene names: 83592496

Gene position: 1377988-1376309 (Counterclockwise)

Preceding gene: 83592508

Following gene: 83592490

Centisome position: 31.66

GC content: 64.4

Gene sequence:

>1680_bases
ATGAAGCGTACTTACGGCATTTCACTAAAATTGATGTCAACTGCGATTCTGACGGTTGTCGGCTTCACCATCGTTGCCGG
GATGGCGCTCTATCAGCTCCGTACGACGATGATCGCCGACCGTGTCGACAAGCTGACAAATTTGACCGAGATCGCCGAAG
GGGTGGTGAAGTCTTTTTACAACCGGGCTCAATCGGGCGAACTCGACGAAGCGACCGCCAAGAAGCAGGCGCTCAACGCC
CTGCGCGAGGCCCGTTACGCCGGCAATGAATATTTCAGCATCTTCGATCAGAACGGCCTCTGTCTGATGCATGCCGCCCG
CCCCGAGCGGGAAGGCAGGGTTCTGCTGGAAGACAAGGACGCCAATGGCGTGCAGATCGTCAAGGAACTGGTGAAGGTGG
CGGCCGTCGGCGGCGGCATCGTCTCCTATAAATTCCCCCACGTCGGCGAAACCACGCCGGTCCCCAAGATGTCCTATGGC
AATGATTTCAAGCCCTGGAACTGGGTTCTGGTGACCGGCATCTTCATCGACGATGTCGATCACGCCTTTTATTCCATCGC
CGCGCGTTTCGCCCTGGTTCTTGGCGTGGTGATGATCGCCGCCGTCGGGCTGGTGATCGCGCTGTCGCGCAATATCGGCG
GCGGCGTCATCCGGTTGGTCAAGGTGACCGAGCGTCTGGCGGCCCGCGACTTTTCGGTCGAAATCCCCGCCACCGACCGC
GGCGATGAAATCGGTCAATTGGCCAAGGCGGTCGCCGTCTTGCGCGATGGCGCCCGCGAGGCCGACCATCTGCGCCAGCG
CCAGGACGGCTTGAAGGCCGAGGCCGAGGCCGAACGCCGCCGCGCCATGCTCAGCGTCGCCGATGGCTTCGAAGGCAGCG
TCAAACGGGTGGCCGATACCATCGCCGGAGCGGCCAATCAGTTGGAGGACGCGGCGAAAGCCGTCAGCGGCGCCGTCGAT
ACCGCCTCCCATCAGGCAACCTCGATCGCCGCCGCTGCCGAACAGGCCTCGGCCAATGTGGCGACCGTCGCCTCGGCCGC
CGAGGAGCTGACCTCGTCGATCCAGGAAATCAGCCGTCAGGTCCACCAGTCCTCGACGATTTCGACCAATGCGGTGAAGG
AGGCCCAGAACACCAACGAACTGGTGATGGGGCTGGCCGCCACGGCGACCCGCATCGGCGACGTGGTCAAGCTGATCAAC
GACATCGCCAGCCAGACCAACCTGCTCGCGCTCAACGCCACCATCGAGGCGGCACGGGCGGGCGATGCCGGCAAGGGCTT
CGCCGTCGTCGCCAATGAGGTCAAATCCCTGGCCAATCAGACGGCCAAGGCGACCGACGACATCTCCAACCAGATCGGCG
CCGTGCAATCGGCGACCGGCCAGGCGGTGGACGCCATTCGCGGCATTACCGGCACCATCGCCCAGATCAGCGAAATCGGC
GAAACCATCGCCGCCGCCGTCGAGGAACAGGGCGCCGCCACCTTGGAAATCGCCCGCAACGTCCAGCAGGCGGCGGCGGG
CACCCAGGAGGTCACTTCGACCCTCAGCCAGCTTTCGGCGGTGACCGCCCAGGCCGGATCCTCGGCCGGCGGCATGCTGA
GCGACTGCGAGGCCATGGTCGCCGAAGCCAAGACCCTGCGCGGCGAGGTCGCGGGTTTCCTGTCCGGCATCCGCGCCTGA

Upstream 100 bases:

>100_bases
ACAATCCATCCGCGCGAAATATCGGTTTTGCTCTACCGTTAGAATTCTTCTATTTATCTTCCCTGGGGAGAGAGTGTTTT
GAACCAGGAGTCAGGACGTT

Downstream 100 bases:

>100_bases
TCCACCGAGGGCAAGGGGGCCTTGGCCGCCCCCTTGCCCTACTCGCCGCGTTTCAAACGATAGCCCACCCCGGGTTCGGT
CACGATCAGCCGGGGTTCCG

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MKRTYGISLKLMSTAILTVVGFTIVAGMALYQLRTTMIADRVDKLTNLTEIAEGVVKSFYNRAQSGELDEATAKKQALNA
LREARYAGNEYFSIFDQNGLCLMHAARPEREGRVLLEDKDANGVQIVKELVKVAAVGGGIVSYKFPHVGETTPVPKMSYG
NDFKPWNWVLVTGIFIDDVDHAFYSIAARFALVLGVVMIAAVGLVIALSRNIGGGVIRLVKVTERLAARDFSVEIPATDR
GDEIGQLAKAVAVLRDGAREADHLRQRQDGLKAEAEAERRRAMLSVADGFEGSVKRVADTIAGAANQLEDAAKAVSGAVD
TASHQATSIAAAAEQASANVATVASAAEELTSSIQEISRQVHQSSTISTNAVKEAQNTNELVMGLAATATRIGDVVKLIN
DIASQTNLLALNATIEAARAGDAGKGFAVVANEVKSLANQTAKATDDISNQIGAVQSATGQAVDAIRGITGTIAQISEIG
ETIAAAVEEQGAATLEIARNVQQAAAGTQEVTSTLSQLSAVTAQAGSSAGGMLSDCEAMVAEAKTLRGEVAGFLSGIRA

Sequences:

>Translated_559_residues
MKRTYGISLKLMSTAILTVVGFTIVAGMALYQLRTTMIADRVDKLTNLTEIAEGVVKSFYNRAQSGELDEATAKKQALNA
LREARYAGNEYFSIFDQNGLCLMHAARPEREGRVLLEDKDANGVQIVKELVKVAAVGGGIVSYKFPHVGETTPVPKMSYG
NDFKPWNWVLVTGIFIDDVDHAFYSIAARFALVLGVVMIAAVGLVIALSRNIGGGVIRLVKVTERLAARDFSVEIPATDR
GDEIGQLAKAVAVLRDGAREADHLRQRQDGLKAEAEAERRRAMLSVADGFEGSVKRVADTIAGAANQLEDAAKAVSGAVD
TASHQATSIAAAAEQASANVATVASAAEELTSSIQEISRQVHQSSTISTNAVKEAQNTNELVMGLAATATRIGDVVKLIN
DIASQTNLLALNATIEAARAGDAGKGFAVVANEVKSLANQTAKATDDISNQIGAVQSATGQAVDAIRGITGTIAQISEIG
ETIAAAVEEQGAATLEIARNVQQAAAGTQEVTSTLSQLSAVTAQAGSSAGGMLSDCEAMVAEAKTLRGEVAGFLSGIRA
>Mature_559_residues
MKRTYGISLKLMSTAILTVVGFTIVAGMALYQLRTTMIADRVDKLTNLTEIAEGVVKSFYNRAQSGELDEATAKKQALNA
LREARYAGNEYFSIFDQNGLCLMHAARPEREGRVLLEDKDANGVQIVKELVKVAAVGGGIVSYKFPHVGETTPVPKMSYG
NDFKPWNWVLVTGIFIDDVDHAFYSIAARFALVLGVVMIAAVGLVIALSRNIGGGVIRLVKVTERLAARDFSVEIPATDR
GDEIGQLAKAVAVLRDGAREADHLRQRQDGLKAEAEAERRRAMLSVADGFEGSVKRVADTIAGAANQLEDAAKAVSGAVD
TASHQATSIAAAAEQASANVATVASAAEELTSSIQEISRQVHQSSTISTNAVKEAQNTNELVMGLAATATRIGDVVKLIN
DIASQTNLLALNATIEAARAGDAGKGFAVVANEVKSLANQTAKATDDISNQIGAVQSATGQAVDAIRGITGTIAQISEIG
ETIAAAVEEQGAATLEIARNVQQAAAGTQEVTSTLSQLSAVTAQAGSSAGGMLSDCEAMVAEAKTLRGEVAGFLSGIRA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=220, Percent_Identity=31.3636363636364, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1789453, Length=237, Percent_Identity=35.0210970464135, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1787690, Length=208, Percent_Identity=31.25, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI2367378, Length=359, Percent_Identity=27.2980501392758, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1788195, Length=198, Percent_Identity=31.3131313131313, Blast_Score=88, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58429; Mature: 58429

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTYGISLKLMSTAILTVVGFTIVAGMALYQLRTTMIADRVDKLTNLTEIAEGVVKSFY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRAQSGELDEATAKKQALNALREARYAGNEYFSIFDQNGLCLMHAARPEREGRVLLEDKD
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCEEEEECCC
ANGVQIVKELVKVAAVGGGIVSYKFPHVGETTPVPKMSYGNDFKPWNWVLVTGIFIDDVD
CCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHH
HAFYSIAARFALVLGVVMIAAVGLVIALSRNIGGGVIRLVKVTERLAARDFSVEIPATDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEECCCCCC
GDEIGQLAKAVAVLRDGAREADHLRQRQDGLKAEAEAERRRAMLSVADGFEGSVKRVADT
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
IAGAANQLEDAAKAVSGAVDTASHQATSIAAAAEQASANVATVASAAEELTSSIQEISRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VHQSSTISTNAVKEAQNTNELVMGLAATATRIGDVVKLINDIASQTNLLALNATIEAARA
HHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHC
GDAGKGFAVVANEVKSLANQTAKATDDISNQIGAVQSATGQAVDAIRGITGTIAQISEIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
ETIAAAVEEQGAATLEIARNVQQAAAGTQEVTSTLSQLSAVTAQAGSSAGGMLSDCEAMV
HHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
AEAKTLRGEVAGFLSGIRA
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRTYGISLKLMSTAILTVVGFTIVAGMALYQLRTTMIADRVDKLTNLTEIAEGVVKSFY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRAQSGELDEATAKKQALNALREARYAGNEYFSIFDQNGLCLMHAARPEREGRVLLEDKD
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCEEEEECCC
ANGVQIVKELVKVAAVGGGIVSYKFPHVGETTPVPKMSYGNDFKPWNWVLVTGIFIDDVD
CCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHH
HAFYSIAARFALVLGVVMIAAVGLVIALSRNIGGGVIRLVKVTERLAARDFSVEIPATDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEECCCCCC
GDEIGQLAKAVAVLRDGAREADHLRQRQDGLKAEAEAERRRAMLSVADGFEGSVKRVADT
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
IAGAANQLEDAAKAVSGAVDTASHQATSIAAAAEQASANVATVASAAEELTSSIQEISRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VHQSSTISTNAVKEAQNTNELVMGLAATATRIGDVVKLINDIASQTNLLALNATIEAARA
HHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHC
GDAGKGFAVVANEVKSLANQTAKATDDISNQIGAVQSATGQAVDAIRGITGTIAQISEIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
ETIAAAVEEQGAATLEIARNVQQAAAGTQEVTSTLSQLSAVTAQAGSSAGGMLSDCEAMV
HHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
AEAKTLRGEVAGFLSGIRA
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]