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The map label for this gene is 83592452

Identifier: 83592452

GI number: 83592452

Start: 1311278

End: 1311832

Strand: Direct

Name: 83592452

Synonym: Rru_A1116

Alternate gene names: NA

Gene position: 1311278-1311832 (Clockwise)

Preceding gene: 83592451

Following gene: 83592453

Centisome position: 30.12

GC content: 58.74

Gene sequence:

>555_bases
ATGACACGCGGTAGAAGAATTACGTCTGATGATATTCTGGAGGCTGTCGAGCGTGTGGTGCTGCGACTTGGTGCCGCCGG
TCTTTCGATCGACGCCGTTGCTCAGGAAGCGGGCGTGAGCAAATCGCGCGTGGTTTATGATCACAAGTCGAAAAGCGCGC
TGCTGGAAGCGCTGATCGAGCGTCATATAGAACTGGAGGACGCCCGTATCGGTGAAGCGATGGCCTCGGCCAGGGATACG
CCGCATCCGGAGCTCTTTGCTCGCATTGCTGTCGCCGAACCCGAGTTCAACGAAATCGACAAGGCCGTGGCAATGGCCAT
CAGCGCCTCGGTGACGAACGAGGACAGGCTGCAAACGCGGTTGAGGGAATGGACGCGCAAGGATCTTGCGGCCGTCACTC
ATACCGATCGTCCCGAGGCGGGCTTGCTCGCCTATCTGGCGCTCTGCGGCTTCTACTGGATCGAGCTTGGAAGCTTCCTT
CAATGGAGCCCCGACGAGCGGTCAAGGGTTCTCGAAGGAATCCGCAAGGTATTCACCTCCTACCCAGAACCCTAA

Upstream 100 bases:

>100_bases
TAATGCCGACAGGCCTGACCCGGCGCGTCAAATGCGTTCCGAGAAAAATATGGCAAAAAAGAACGAACGTTCGTATACCT
AACCCAAGCAGGAGGGGACG

Downstream 100 bases:

>100_bases
CAACGCGCCGCGCCCAAGATGCGTGGCCAAGCTCTCAGGATTACTCCCATGCCCGTTCTTCGCAGGCTGCGGATCAGCCC
GCGCCCCGTTGGCTTTGCTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MTRGRRITSDDILEAVERVVLRLGAAGLSIDAVAQEAGVSKSRVVYDHKSKSALLEALIERHIELEDARIGEAMASARDT
PHPELFARIAVAEPEFNEIDKAVAMAISASVTNEDRLQTRLREWTRKDLAAVTHTDRPEAGLLAYLALCGFYWIELGSFL
QWSPDERSRVLEGIRKVFTSYPEP

Sequences:

>Translated_184_residues
MTRGRRITSDDILEAVERVVLRLGAAGLSIDAVAQEAGVSKSRVVYDHKSKSALLEALIERHIELEDARIGEAMASARDT
PHPELFARIAVAEPEFNEIDKAVAMAISASVTNEDRLQTRLREWTRKDLAAVTHTDRPEAGLLAYLALCGFYWIELGSFL
QWSPDERSRVLEGIRKVFTSYPEP
>Mature_183_residues
TRGRRITSDDILEAVERVVLRLGAAGLSIDAVAQEAGVSKSRVVYDHKSKSALLEALIERHIELEDARIGEAMASARDTP
HPELFARIAVAEPEFNEIDKAVAMAISASVTNEDRLQTRLREWTRKDLAAVTHTDRPEAGLLAYLALCGFYWIELGSFLQ
WSPDERSRVLEGIRKVFTSYPEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20548; Mature: 20416

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGRRITSDDILEAVERVVLRLGAAGLSIDAVAQEAGVSKSRVVYDHKSKSALLEALIE
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHH
RHIELEDARIGEAMASARDTPHPELFARIAVAEPEFNEIDKAVAMAISASVTNEDRLQTR
HHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
LREWTRKDLAAVTHTDRPEAGLLAYLALCGFYWIELGSFLQWSPDERSRVLEGIRKVFTS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
YPEP
CCCC
>Mature Secondary Structure 
TRGRRITSDDILEAVERVVLRLGAAGLSIDAVAQEAGVSKSRVVYDHKSKSALLEALIE
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHH
RHIELEDARIGEAMASARDTPHPELFARIAVAEPEFNEIDKAVAMAISASVTNEDRLQTR
HHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
LREWTRKDLAAVTHTDRPEAGLLAYLALCGFYWIELGSFLQWSPDERSRVLEGIRKVFTS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
YPEP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA