| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is suhB [H]
Identifier: 83592412
GI number: 83592412
Start: 1267737
End: 1268528
Strand: Reverse
Name: suhB [H]
Synonym: Rru_A1076
Alternate gene names: 83592412
Gene position: 1268528-1267737 (Counterclockwise)
Preceding gene: 83592413
Following gene: 83592411
Centisome position: 29.14
GC content: 64.02
Gene sequence:
>792_bases ATGGCCATTCGTTCCGCCCTCATGAACGTGATGCTCATCGCCGTTAAAAAGGCGGCAAAGGGACTGGTCCGCGACTTCGG CGAGCTGGAAAACCTCCAGGTCTCGCGCAAGGGGCCAAGCGATTTCGTCAGCAACGCCGACCTCAAGGCCGAAAAGATCC TGAAGGCCGAGTTGCGCAAGGCCCGCCCGGCCTATTCCTTCCTGATGGAGGAAAGCGGCGCCGAGGACGGGGCCGATACC AGCCGGCGCTGGATCGTCGATCCCCTGGACGGCACCACCAATTTCCTGCACGGCATTCCCCATTTCGCCATTTCCGTCGC CCTTGAGGAAAAGGGCGAGATCGTCGCCGGGGTGATCTACAACCCGATCCTCGACGAGCTTTACACCGCCGAAAAGGGCA ATGGCGCTTTCGTCAACGACCGCCGCCTGCGCGTTTCGGGGCGCCGCGATCTGGCCGAGAGCCTGTTTGCCACCGGCATT CCCTTTCAGGGCAAGGGCGGCCACGCCCGCTTCCTTGGCCAGCTCGCCAAGGTCATGGCCAAGACCTCGGGCGTGCGGCG CATCGGCGCCGCCTCGCTCGATCTCGCCTATGTCGCCGCCGGCCGCGTCGATGGCTATTGGGAAGAAGGCCTTCATCCCT GGGATTGCGCCGCCGGGATCTTGCTGGTCAAGGAAGCCGGCGGCTATGTCACCACCCTGGACGGCAAGCCCGACCCCCTG CGCCAGGGCAGCCTGCTGGCTGCCAATCCGCTGATGCATCCCCTTCTAGGCGAATTACTGGCCGAAGAGTAA
Upstream 100 bases:
>100_bases CGCGTTGGCCGGTTCTTTCCTTTTTGCGCCCTTTGCGGCGCGTGACCGTTTCGCGCCCCTTTTTCGCGCCTGACAGCCCC CGATAGCTAAGGACCCCGCC
Downstream 100 bases:
>100_bases GCGCCCCACGGGTTGCCCGCTCGGACCACCGTGATATAGTACGGGCAAATCCGACTCGGGCGGTGGCTGATCGCCGCCCC GTCGGGCGGCAACTCCCTGG
Product: inositol monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MAIRSALMNVMLIAVKKAAKGLVRDFGELENLQVSRKGPSDFVSNADLKAEKILKAELRKARPAYSFLMEESGAEDGADT SRRWIVDPLDGTTNFLHGIPHFAISVALEEKGEIVAGVIYNPILDELYTAEKGNGAFVNDRRLRVSGRRDLAESLFATGI PFQGKGGHARFLGQLAKVMAKTSGVRRIGAASLDLAYVAAGRVDGYWEEGLHPWDCAAGILLVKEAGGYVTTLDGKPDPL RQGSLLAANPLMHPLLGELLAEE
Sequences:
>Translated_263_residues MAIRSALMNVMLIAVKKAAKGLVRDFGELENLQVSRKGPSDFVSNADLKAEKILKAELRKARPAYSFLMEESGAEDGADT SRRWIVDPLDGTTNFLHGIPHFAISVALEEKGEIVAGVIYNPILDELYTAEKGNGAFVNDRRLRVSGRRDLAESLFATGI PFQGKGGHARFLGQLAKVMAKTSGVRRIGAASLDLAYVAAGRVDGYWEEGLHPWDCAAGILLVKEAGGYVTTLDGKPDPL RQGSLLAANPLMHPLLGELLAEE >Mature_262_residues AIRSALMNVMLIAVKKAAKGLVRDFGELENLQVSRKGPSDFVSNADLKAEKILKAELRKARPAYSFLMEESGAEDGADTS RRWIVDPLDGTTNFLHGIPHFAISVALEEKGEIVAGVIYNPILDELYTAEKGNGAFVNDRRLRVSGRRDLAESLFATGIP FQGKGGHARFLGQLAKVMAKTSGVRRIGAASLDLAYVAAGRVDGYWEEGLHPWDCAAGILLVKEAGGYVTTLDGKPDPLR QGSLLAANPLMHPLLGELLAEE
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=226, Percent_Identity=39.3805309734513, Blast_Score=157, Evalue=6e-39, Organism=Homo sapiens, GI5031789, Length=233, Percent_Identity=35.1931330472103, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI221625487, Length=233, Percent_Identity=35.1931330472103, Blast_Score=151, Evalue=5e-37, Organism=Homo sapiens, GI221625507, Length=117, Percent_Identity=38.4615384615385, Blast_Score=98, Evalue=9e-21, Organism=Escherichia coli, GI1788882, Length=244, Percent_Identity=43.0327868852459, Blast_Score=222, Evalue=2e-59, Organism=Escherichia coli, GI1790659, Length=131, Percent_Identity=27.4809160305344, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193202572, Length=240, Percent_Identity=36.6666666666667, Blast_Score=142, Evalue=2e-34, Organism=Caenorhabditis elegans, GI193202570, Length=248, Percent_Identity=36.6935483870968, Blast_Score=142, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6320493, Length=199, Percent_Identity=38.6934673366834, Blast_Score=137, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6321836, Length=205, Percent_Identity=34.6341463414634, Blast_Score=117, Evalue=2e-27, Organism=Drosophila melanogaster, GI21357329, Length=254, Percent_Identity=34.251968503937, Blast_Score=147, Evalue=8e-36, Organism=Drosophila melanogaster, GI24664922, Length=220, Percent_Identity=38.1818181818182, Blast_Score=144, Evalue=5e-35, Organism=Drosophila melanogaster, GI24664926, Length=215, Percent_Identity=35.8139534883721, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI21357957, Length=232, Percent_Identity=34.9137931034483, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI24664918, Length=258, Percent_Identity=32.5581395348837, Blast_Score=128, Evalue=4e-30, Organism=Drosophila melanogaster, GI21357303, Length=238, Percent_Identity=34.0336134453782, Blast_Score=128, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 28369; Mature: 28238
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRSALMNVMLIAVKKAAKGLVRDFGELENLQVSRKGPSDFVSNADLKAEKILKAELRK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHCCCCCHHHHHHHHHHHH ARPAYSFLMEESGAEDGADTSRRWIVDPLDGTTNFLHGIPHFAISVALEEKGEIVAGVIY CCHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHCCCHHHEEEEECCCCCEEEHHHH NPILDELYTAEKGNGAFVNDRRLRVSGRRDLAESLFATGIPFQGKGGHARFLGQLAKVMA HHHHHHHHHCCCCCCCEECCCEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH KTSGVRRIGAASLDLAYVAAGRVDGYWEEGLHPWDCAAGILLVKEAGGYVTTLDGKPDPL HHCCHHHHCCHHHHHHHHHHCCCCCHHHHCCCCHHHHCCEEEEEECCCEEEECCCCCCCC RQGSLLAANPLMHPLLGELLAEE CCCCEEECCHHHHHHHHHHHHCC >Mature Secondary Structure AIRSALMNVMLIAVKKAAKGLVRDFGELENLQVSRKGPSDFVSNADLKAEKILKAELRK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHCCCCCHHHHHHHHHHHH ARPAYSFLMEESGAEDGADTSRRWIVDPLDGTTNFLHGIPHFAISVALEEKGEIVAGVIY CCHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHCCCHHHEEEEECCCCCEEEHHHH NPILDELYTAEKGNGAFVNDRRLRVSGRRDLAESLFATGIPFQGKGGHARFLGQLAKVMA HHHHHHHHHCCCCCCCEECCCEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH KTSGVRRIGAASLDLAYVAAGRVDGYWEEGLHPWDCAAGILLVKEAGGYVTTLDGKPDPL HHCCHHHHCCHHHHHHHHHHCCCCCHHHHCCCCHHHHCCEEEEEECCCEEEECCCCCCCC RQGSLLAANPLMHPLLGELLAEE CCCCEEECCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]