| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83592410
Identifier: 83592410
GI number: 83592410
Start: 1264641
End: 1265969
Strand: Reverse
Name: 83592410
Synonym: Rru_A1074
Alternate gene names: NA
Gene position: 1265969-1264641 (Counterclockwise)
Preceding gene: 83592411
Following gene: 83592409
Centisome position: 29.08
GC content: 67.34
Gene sequence:
>1329_bases ATGGGGTGGGATCGCCGCCGGAGCCCCCTGTCTCCGGGGGGCCCTTCCCTCCCGCCGTCCCCTGTCCCACCCCGCCCCGC CCTCCATCAACCGGACGCCACGATGAGACGACCGCGCCGCTTCCTGCTCCGCATGGCCTTGTTCCTCGTCGCCGTGGGAG CGGTGGCGGCCGTTCTCGGCCCGTCGATGGCCCGCTTCTTCATGGCCAATCCGGCGCTCAACAGCCTGATTCTGGGCGTC GGGCTGATCGGCGTCATCCTTAATTTCCGCCATGTCACCAGCCTGGAACCCGAGGTTCGCTGGATCACCGCCTTCAGCCA GGGCAAGGCCTCGGTTTCCTCGGCTGAAATGCCGCGCCTGCTCGCCCCGATGGCGACCATGCTGGCCGAACACAAGGAGC GCGGCCGCGAGCGCGGTCGCCTGACGCTCTCGGCCCCGGCGGCGCGCTCGCTGCTCGATGGCATCGCCGCCCGCCTTGAC GAAAACCGCGAGACCTCGCGCTATTTCATCGGGCTGATGGTGTTTCTCGGCCTTCTGGGCACCTTCTGGGGCCTGTTGGG CACGGTGGGGGCCATCGCCAATGTCATCACCACCCTGACCATCAGCAGCGACGATATGACCCGGGTCTTCGCCGACCTCA AATCGGGTCTGGAAGCGCCGCTGGGCGGCATGGGCACGGCCTTTTCCTCGTCGCTGTTCGGCCTTGCCAGCTCCCTGGTG CTGGGTTTTCTCGACCTGCAGGCCGGACAGGCCCAAAACGCCTTTTACAACGGCTTGGAAGACTGGCTTTCCAAGCAGAC CCGCCTGGGCACGGGAGGATCGTTGGGCGAGGGCGAACAATCGGTGCCGGGCTATATTCAGGCGCTTCTTGAAAAAACCG CCGACAGCCTGGACGACCTTCAGCGCACCATCGTGCGCGGCGAAGAAAACGCCATGGCCACCAATGTCCAGATTCGCGAC ATGGCCGAAACCATGGCGACGCTGACCGATCAGATGCGCACCGAACAGGCGGTGCTGCTCAAGCTCGCCGAGACCCAGGC CGATCTGCGGCCGGTGCTCGCCCAGCTTTCCGAGTCGCTGGCCTCGGGCGCCAAGCCCGCCGCCGCCGAGGATCCGCTGT CGGGGGTGGCCGGCCATGTCCGCAACATGGACGCGGCGGTGACCTATATGGCCAATCAGATGGTTCAGGGGCGCGAACAA CTGCTGAAGGAACTGCGCGCCGAGATCAAGATGCTCGCCCGCACCATCGCCGCCACCGCCGCCCCCGGGACCTCGGGCCT GGGTGGTGGTGGCGGCCCGTCCATGCCGCCGCCGCGCGGCGAGCGCTGA
Upstream 100 bases:
>100_bases GGGACTTGAAAATGATGGAAGAATCCCGACATCCCCGCTGTGGGTGTGGGTCTTTCACGCCCCTGTCGCCCGTGCCATTT CCTGAAAAAAGCCCAAGATC
Downstream 100 bases:
>100_bases GCAAGGCGCCCGCCGATGGCCGGATTATCGCGCAGACGCCAGAGGGTTTTCGATATCTGGCCGGGATTCGTCGACGTGCT GTCGACGCTGCTGATCATCG
Product: MotA/TolQ/ExbB proton channel family protein
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel Family; Transmembrane Protein
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MGWDRRRSPLSPGGPSLPPSPVPPRPALHQPDATMRRPRRFLLRMALFLVAVGAVAAVLGPSMARFFMANPALNSLILGV GLIGVILNFRHVTSLEPEVRWITAFSQGKASVSSAEMPRLLAPMATMLAEHKERGRERGRLTLSAPAARSLLDGIAARLD ENRETSRYFIGLMVFLGLLGTFWGLLGTVGAIANVITTLTISSDDMTRVFADLKSGLEAPLGGMGTAFSSSLFGLASSLV LGFLDLQAGQAQNAFYNGLEDWLSKQTRLGTGGSLGEGEQSVPGYIQALLEKTADSLDDLQRTIVRGEENAMATNVQIRD MAETMATLTDQMRTEQAVLLKLAETQADLRPVLAQLSESLASGAKPAAAEDPLSGVAGHVRNMDAAVTYMANQMVQGREQ LLKELRAEIKMLARTIAATAAPGTSGLGGGGGPSMPPPRGER
Sequences:
>Translated_442_residues MGWDRRRSPLSPGGPSLPPSPVPPRPALHQPDATMRRPRRFLLRMALFLVAVGAVAAVLGPSMARFFMANPALNSLILGV GLIGVILNFRHVTSLEPEVRWITAFSQGKASVSSAEMPRLLAPMATMLAEHKERGRERGRLTLSAPAARSLLDGIAARLD ENRETSRYFIGLMVFLGLLGTFWGLLGTVGAIANVITTLTISSDDMTRVFADLKSGLEAPLGGMGTAFSSSLFGLASSLV LGFLDLQAGQAQNAFYNGLEDWLSKQTRLGTGGSLGEGEQSVPGYIQALLEKTADSLDDLQRTIVRGEENAMATNVQIRD MAETMATLTDQMRTEQAVLLKLAETQADLRPVLAQLSESLASGAKPAAAEDPLSGVAGHVRNMDAAVTYMANQMVQGREQ LLKELRAEIKMLARTIAATAAPGTSGLGGGGGPSMPPPRGER >Mature_441_residues GWDRRRSPLSPGGPSLPPSPVPPRPALHQPDATMRRPRRFLLRMALFLVAVGAVAAVLGPSMARFFMANPALNSLILGVG LIGVILNFRHVTSLEPEVRWITAFSQGKASVSSAEMPRLLAPMATMLAEHKERGRERGRLTLSAPAARSLLDGIAARLDE NRETSRYFIGLMVFLGLLGTFWGLLGTVGAIANVITTLTISSDDMTRVFADLKSGLEAPLGGMGTAFSSSLFGLASSLVL GFLDLQAGQAQNAFYNGLEDWLSKQTRLGTGGSLGEGEQSVPGYIQALLEKTADSLDDLQRTIVRGEENAMATNVQIRDM AETMATLTDQMRTEQAVLLKLAETQADLRPVLAQLSESLASGAKPAAAEDPLSGVAGHVRNMDAAVTYMANQMVQGREQL LKELRAEIKMLARTIAATAAPGTSGLGGGGGPSMPPPRGER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46970; Mature: 46839
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWDRRRSPLSPGGPSLPPSPVPPRPALHQPDATMRRPRRFLLRMALFLVAVGAVAAVLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PSMARFFMANPALNSLILGVGLIGVILNFRHVTSLEPEVRWITAFSQGKASVSSAEMPRL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEHHCCCCHHHHHHHHHH LAPMATMLAEHKERGRERGRLTLSAPAARSLLDGIAARLDENRETSRYFIGLMVFLGLLG HHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TFWGLLGTVGAIANVITTLTISSDDMTRVFADLKSGLEAPLGGMGTAFSSSLFGLASSLV HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH LGFLDLQAGQAQNAFYNGLEDWLSKQTRLGTGGSLGEGEQSVPGYIQALLEKTADSLDDL HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QRTIVRGEENAMATNVQIRDMAETMATLTDQMRTEQAVLLKLAETQADLRPVLAQLSESL HHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASGAKPAAAEDPLSGVAGHVRNMDAAVTYMANQMVQGREQLLKELRAEIKMLARTIAATA HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APGTSGLGGGGGPSMPPPRGER CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GWDRRRSPLSPGGPSLPPSPVPPRPALHQPDATMRRPRRFLLRMALFLVAVGAVAAVLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PSMARFFMANPALNSLILGVGLIGVILNFRHVTSLEPEVRWITAFSQGKASVSSAEMPRL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEHHCCCCHHHHHHHHHH LAPMATMLAEHKERGRERGRLTLSAPAARSLLDGIAARLDENRETSRYFIGLMVFLGLLG HHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TFWGLLGTVGAIANVITTLTISSDDMTRVFADLKSGLEAPLGGMGTAFSSSLFGLASSLV HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH LGFLDLQAGQAQNAFYNGLEDWLSKQTRLGTGGSLGEGEQSVPGYIQALLEKTADSLDDL HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QRTIVRGEENAMATNVQIRDMAETMATLTDQMRTEQAVLLKLAETQADLRPVLAQLSESL HHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASGAKPAAAEDPLSGVAGHVRNMDAAVTYMANQMVQGREQLLKELRAEIKMLARTIAATA HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APGTSGLGGGGGPSMPPPRGER CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA