| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83592358
Identifier: 83592358
GI number: 83592358
Start: 1211485
End: 1212210
Strand: Reverse
Name: 83592358
Synonym: Rru_A1022
Alternate gene names: NA
Gene position: 1212210-1211485 (Counterclockwise)
Preceding gene: 83592359
Following gene: 83592356
Centisome position: 27.85
GC content: 70.52
Gene sequence:
>726_bases ATGCCGCGCCTTCTTTCCCCTTTCGGCCCTGGGGCAAGCCCCCGCCGCCCCGCCCCACGCCGCGCCGCCATCGCCCTGGC CTGCGCCCTGGCCGTCGCCCTGCCGACGGCGTCCCAGGCCGCCCCGAGCCCGGCCGCCGATGCTCCGGTGATGATTTCCC AGCCGATTCGTGTCTCGGTCAACGCCATGCAACTGGCCCCTTTCGATCCGGCCACCGCCCTTTCGGTGCGGGTCATGGAC GACAGCCCGGCCAATTTGCGGCTGCTTGACTGGGTGAGGCGCTCGCTGATCGCCCGCGGCTATCGCATCGGCGGCGACGA CGCGCCGCTGATCCTTGATATCGACACCGTGGCCTCCAACGCCCCGGCCCGCCCCAATGCCGATCGCAGTGTTTTGGGCC TGCGCGGCCAAGCCGGCACCGGCCAAGACGAGGACTCGGTGGATGTGACCGTGCGCCTGTTCTCCAATCGCCAAGGCAGC GTCATCGGCGGCGACGTCGACGCCCCGCCCGCTTCGCTCGGTCAGCCGGATTTGCGGATCGATGCCGGATTGACCGAACG GGCCAGCGGCCGCCGGGTATGGCAAGGCTGGGCCAGCGTCACCGCCCCCACCCTGGGACTCGAGGATCAGGGGCTGGTTC TGGCCGATCCGCTGATCGCCGAGTTCGGCAAGGCCACCCGGGCCAAGATCCTGACCCTGCCCGCCGGCACGCTCAACCGG CCATAA
Upstream 100 bases:
>100_bases CGCAACGATCGGCAATTGCCTCGCGCCGTGGACTGGGCCATTTTCCCCCCTTGCGTCGAAAAGACCGGGCCCTGGCCCGG ATTCCCAGGAGAGCCCTGTC
Downstream 100 bases:
>100_bases AGCGGCCTACGATCAGTCAAAAAAAGGGTGGGAAGCGTTTGCTCCCCACCCTTTTTCTTAAGGCGACGCGATTGGCGAAA GGACAGCGGCCGGCGGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MPRLLSPFGPGASPRRPAPRRAAIALACALAVALPTASQAAPSPAADAPVMISQPIRVSVNAMQLAPFDPATALSVRVMD DSPANLRLLDWVRRSLIARGYRIGGDDAPLILDIDTVASNAPARPNADRSVLGLRGQAGTGQDEDSVDVTVRLFSNRQGS VIGGDVDAPPASLGQPDLRIDAGLTERASGRRVWQGWASVTAPTLGLEDQGLVLADPLIAEFGKATRAKILTLPAGTLNR P
Sequences:
>Translated_241_residues MPRLLSPFGPGASPRRPAPRRAAIALACALAVALPTASQAAPSPAADAPVMISQPIRVSVNAMQLAPFDPATALSVRVMD DSPANLRLLDWVRRSLIARGYRIGGDDAPLILDIDTVASNAPARPNADRSVLGLRGQAGTGQDEDSVDVTVRLFSNRQGS VIGGDVDAPPASLGQPDLRIDAGLTERASGRRVWQGWASVTAPTLGLEDQGLVLADPLIAEFGKATRAKILTLPAGTLNR P >Mature_240_residues PRLLSPFGPGASPRRPAPRRAAIALACALAVALPTASQAAPSPAADAPVMISQPIRVSVNAMQLAPFDPATALSVRVMDD SPANLRLLDWVRRSLIARGYRIGGDDAPLILDIDTVASNAPARPNADRSVLGLRGQAGTGQDEDSVDVTVRLFSNRQGSV IGGDVDAPPASLGQPDLRIDAGLTERASGRRVWQGWASVTAPTLGLEDQGLVLADPLIAEFGKATRAKILTLPAGTLNRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25097; Mature: 24966
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLLSPFGPGASPRRPAPRRAAIALACALAVALPTASQAAPSPAADAPVMISQPIRVSV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEE NAMQLAPFDPATALSVRVMDDSPANLRLLDWVRRSLIARGYRIGGDDAPLILDIDTVASN EEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEECCCCCCEEEEEHHHCCC APARPNADRSVLGLRGQAGTGQDEDSVDVTVRLFSNRQGSVIGGDVDAPPASLGQPDLRI CCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCCCEEE DAGLTERASGRRVWQGWASVTAPTLGLEDQGLVLADPLIAEFGKATRAKILTLPAGTLNR ECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHCCCCCEEEEEECCCCCCC P C >Mature Secondary Structure PRLLSPFGPGASPRRPAPRRAAIALACALAVALPTASQAAPSPAADAPVMISQPIRVSV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEE NAMQLAPFDPATALSVRVMDDSPANLRLLDWVRRSLIARGYRIGGDDAPLILDIDTVASN EEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEECCCCCCEEEEEHHHCCC APARPNADRSVLGLRGQAGTGQDEDSVDVTVRLFSNRQGSVIGGDVDAPPASLGQPDLRI CCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCCCEEE DAGLTERASGRRVWQGWASVTAPTLGLEDQGLVLADPLIAEFGKATRAKILTLPAGTLNR ECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHCCCCCEEEEEECCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA