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The map label for this gene is potI [H]

Identifier: 83592351

GI number: 83592351

Start: 1203553

End: 1204389

Strand: Reverse

Name: potI [H]

Synonym: Rru_A1015

Alternate gene names: 83592351

Gene position: 1204389-1203553 (Counterclockwise)

Preceding gene: 83592352

Following gene: 83592345

Centisome position: 27.67

GC content: 64.99

Gene sequence:

>837_bases
ATGCGCCGCAACTGGTTCTTGCTGCTGACCATGGGCTTCGGCTTCGCCTTCTTGTATGTGCCGATCCTGTTGCTGATGAT
CTATTCGTTCAACGAAAGCCGGCTGGTCACCGTTTGGGCCGGCTTCTCGGCCAAATGGTATGGCGCCCTGCTCCGGGACG
AGCAGATGCTGGGCGCCGCCTGGATGTCGTTCCGCATCGCCGTGGTCAACGCCTCCCTGGCGACCATCCTCGGCACCCTG
GCCGCCCTGGCGATGGTGCGCTTCGGCCGCTTCCGCGGACGGACGCTGTTTTCGGGCATGCTGTCGGCGCCGCTGGTGAT
GCCCGAGGTGATCACCGGGCTGGCCTCGCTGCTGCTGTTCGTCGCCCTCGAACAGTTGCTGGGCTGGCCCCAGGGCCGGG
GGATGACCACCATCACCATCGCCCACATCACCTTTTCCACCGCCTATGTCGCCGTCGTCTTGCAGTCCCGCCTTCAGGGC
ATGGATCGCTCGATCGAGGAGGCGGCGATGGATCTGGGGGCGCGGCCGGCCAAGGTGTTCTTGCTGATCACCATCCCGGT
GATCGCCCCGGCGCTGGTGGCGGGCTGGCTGCTGTCGTTCACCCTGTCGCTCGATGATCTGGTGATCGCCAGCTTCGTCT
CGGGCCCGGCGTCCTCGACTCTGCCGATGGTGGTGTTCTCTTCGGTGCGCCTGGGGGTCAGCCCGGAAATCAACGCTTTG
GCCACCATCTTGGTGCTGACGGCCACCGTGGCGATCCTGATCGCCGGCTGGATGATGACCCGCCAGGAACGCGCCTCGCA
GAAGCTGACCGAAAAGCGCGAGCAACAGATGGGATAA

Upstream 100 bases:

>100_bases
CGGCGGTGGCGGTGGCGATGCTGCTGATGCTGGTGGTGCCGATCATGATCTTCCAGAACATCCAGGCCAAACAGGCCGAA
GCGGCGGAGGAACGGTCATA

Downstream 100 bases:

>100_bases
GGGCAAATCCCGGGCCCCCTGGACCGGGGGGCGACGACGATTTGCTTGCTCTCAGGACTTCGGCCCGCGCCCTATTGGCG
CGGGTCATGTCCCAGATCAT

Product: binding-protein dependent transport system inner membrane protein

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MRRNWFLLLTMGFGFAFLYVPILLLMIYSFNESRLVTVWAGFSAKWYGALLRDEQMLGAAWMSFRIAVVNASLATILGTL
AALAMVRFGRFRGRTLFSGMLSAPLVMPEVITGLASLLLFVALEQLLGWPQGRGMTTITIAHITFSTAYVAVVLQSRLQG
MDRSIEEAAMDLGARPAKVFLLITIPVIAPALVAGWLLSFTLSLDDLVIASFVSGPASSTLPMVVFSSVRLGVSPEINAL
ATILVLTATVAILIAGWMMTRQERASQKLTEKREQQMG

Sequences:

>Translated_278_residues
MRRNWFLLLTMGFGFAFLYVPILLLMIYSFNESRLVTVWAGFSAKWYGALLRDEQMLGAAWMSFRIAVVNASLATILGTL
AALAMVRFGRFRGRTLFSGMLSAPLVMPEVITGLASLLLFVALEQLLGWPQGRGMTTITIAHITFSTAYVAVVLQSRLQG
MDRSIEEAAMDLGARPAKVFLLITIPVIAPALVAGWLLSFTLSLDDLVIASFVSGPASSTLPMVVFSSVRLGVSPEINAL
ATILVLTATVAILIAGWMMTRQERASQKLTEKREQQMG
>Mature_278_residues
MRRNWFLLLTMGFGFAFLYVPILLLMIYSFNESRLVTVWAGFSAKWYGALLRDEQMLGAAWMSFRIAVVNASLATILGTL
AALAMVRFGRFRGRTLFSGMLSAPLVMPEVITGLASLLLFVALEQLLGWPQGRGMTTITIAHITFSTAYVAVVLQSRLQG
MDRSIEEAAMDLGARPAKVFLLITIPVIAPALVAGWLLSFTLSLDDLVIASFVSGPASSTLPMVVFSSVRLGVSPEINAL
ATILVLTATVAILIAGWMMTRQERASQKLTEKREQQMG

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787081, Length=278, Percent_Identity=59.3525179856115, Blast_Score=301, Evalue=2e-83,
Organism=Escherichia coli, GI1787368, Length=238, Percent_Identity=42.436974789916, Blast_Score=187, Evalue=6e-49,
Organism=Escherichia coli, GI1787714, Length=271, Percent_Identity=32.1033210332103, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1788764, Length=207, Percent_Identity=26.5700483091787, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30356; Mature: 30356

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNWFLLLTMGFGFAFLYVPILLLMIYSFNESRLVTVWAGFSAKWYGALLRDEQMLGAA
CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
WMSFRIAVVNASLATILGTLAALAMVRFGRFRGRTLFSGMLSAPLVMPEVITGLASLLLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
VALEQLLGWPQGRGMTTITIAHITFSTAYVAVVLQSRLQGMDRSIEEAAMDLGARPAKVF
HHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHEE
LLITIPVIAPALVAGWLLSFTLSLDDLVIASFVSGPASSTLPMVVFSSVRLGVSPEINAL
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHH
ATILVLTATVAILIAGWMMTRQERASQKLTEKREQQMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRNWFLLLTMGFGFAFLYVPILLLMIYSFNESRLVTVWAGFSAKWYGALLRDEQMLGAA
CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
WMSFRIAVVNASLATILGTLAALAMVRFGRFRGRTLFSGMLSAPLVMPEVITGLASLLLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
VALEQLLGWPQGRGMTTITIAHITFSTAYVAVVLQSRLQGMDRSIEEAAMDLGARPAKVF
HHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHEE
LLITIPVIAPALVAGWLLSFTLSLDDLVIASFVSGPASSTLPMVVFSSVRLGVSPEINAL
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHH
ATILVLTATVAILIAGWMMTRQERASQKLTEKREQQMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]