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The map label for this gene is arnC [H]

Identifier: 83592341

GI number: 83592341

Start: 1191973

End: 1193007

Strand: Direct

Name: arnC [H]

Synonym: Rru_A1005

Alternate gene names: 83592341

Gene position: 1191973-1193007 (Clockwise)

Preceding gene: 83592336

Following gene: 83592342

Centisome position: 27.38

GC content: 62.32

Gene sequence:

>1035_bases
ATGAACGCGTCCCCGGACGTCTCCCCCTCCGCTCCGACCGTACCTCCGGTCACCCCTTCGGCTTCCGGCGCGGACCCCGA
ACTCCTCTCGGTTATCATTCCCCTCTATAACGAGGAGGAGAATGTCGCGCGCCTGTGCGAGGCGGTTTTCGGCGCCTTGC
GCGACATGGCGCGGCCCTTCGAGGTCATCATGGTCGATGATGGCAGTTCCGACGGCACCGTCGCCCGTCTGGAAACCCTG
GCGCCGTCCTATCCCGAACTGACCGTCGTCACCTTCAAGCGCAACGTCGGCCAGACGGCGGCGATCATGGCCGGAATCGA
TCATTCCCATGGCGCCATCATCGTGCCGATGGACGGCGACCTGCAAAACGACCCCCGCGACATTCCCATTCTTCTGGAAA
AGATGAAGGAAGGCTATGACGTGGTGTCGGGGTGGCGCAAGGATCGCCAGGACGACGCGCTGACCCGCAATTTCCCCAGC
GCGGTCGCCAATTGGCTGATCTCGACGATCTCGGGTGTTCACCTGAAAGACTACGGCTGCACGCTGAAGGCCTATCGCCG
CGAAGTGCTGTCGGGGTACCGCCTCTATGGCGAGATGCACCGCTTCGTGCCGATCTATGCGCGCTGGCAGGGCGCCAAGA
TCACCGAGATCCCGGTGCGCCACCATGCCCGCACCGCCGGCCAATCCAAATACGGCCTGAACCGCATCTTCAAGGTGCTG
CTCGACCTGATGGTGGTGAAGTTCCTGACCCAATACGAAACCAAGCCGATCTATATCTTCGGCGGCATGGGCTTCCTGCT
GTTCCTGGGCGCCATCTTGTCGGCCGGCGGTGGCATCGCGCTGCGCGTGATCGAGGGCATCCACCTCAACCGCACGCCGC
TGCCGCTGATCTCGGCCATGTGCGTGATCACCGGCATGATGTGCATCCTGCTTGGCCTCGTCGCCGAGCTTTTGGTGCGC
ATCTACTTCGAAAGCCAGGACAAAACCGCCTATACGGTCAAAACCGTGATTCGCGGCAAGGGCGGCAAGGGATAA

Upstream 100 bases:

>100_bases
GCGGGGGCGGGGGGTTTCCATTAAGAACCCAGGGCGAAACGCCAGGACGGGGGCGCCCTAATCGCGCCCGCCGCCGCACA
AGCAGGCCAGGAAGAACCCG

Downstream 100 bases:

>100_bases
GGGGCAGCGGATAACCCTTTGGGGCCGTATTGGAAAAGGGGGGGCTTCCCCCCTTTTTTCATGGGGGCGTCTCCTTAAGC
GGCGAAGGGCTCGGTGATTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MNASPDVSPSAPTVPPVTPSASGADPELLSVIIPLYNEEENVARLCEAVFGALRDMARPFEVIMVDDGSSDGTVARLETL
APSYPELTVVTFKRNVGQTAAIMAGIDHSHGAIIVPMDGDLQNDPRDIPILLEKMKEGYDVVSGWRKDRQDDALTRNFPS
AVANWLISTISGVHLKDYGCTLKAYRREVLSGYRLYGEMHRFVPIYARWQGAKITEIPVRHHARTAGQSKYGLNRIFKVL
LDLMVVKFLTQYETKPIYIFGGMGFLLFLGAILSAGGGIALRVIEGIHLNRTPLPLISAMCVITGMMCILLGLVAELLVR
IYFESQDKTAYTVKTVIRGKGGKG

Sequences:

>Translated_344_residues
MNASPDVSPSAPTVPPVTPSASGADPELLSVIIPLYNEEENVARLCEAVFGALRDMARPFEVIMVDDGSSDGTVARLETL
APSYPELTVVTFKRNVGQTAAIMAGIDHSHGAIIVPMDGDLQNDPRDIPILLEKMKEGYDVVSGWRKDRQDDALTRNFPS
AVANWLISTISGVHLKDYGCTLKAYRREVLSGYRLYGEMHRFVPIYARWQGAKITEIPVRHHARTAGQSKYGLNRIFKVL
LDLMVVKFLTQYETKPIYIFGGMGFLLFLGAILSAGGGIALRVIEGIHLNRTPLPLISAMCVITGMMCILLGLVAELLVR
IYFESQDKTAYTVKTVIRGKGGKG
>Mature_344_residues
MNASPDVSPSAPTVPPVTPSASGADPELLSVIIPLYNEEENVARLCEAVFGALRDMARPFEVIMVDDGSSDGTVARLETL
APSYPELTVVTFKRNVGQTAAIMAGIDHSHGAIIVPMDGDLQNDPRDIPILLEKMKEGYDVVSGWRKDRQDDALTRNFPS
AVANWLISTISGVHLKDYGCTLKAYRREVLSGYRLYGEMHRFVPIYARWQGAKITEIPVRHHARTAGQSKYGLNRIFKVL
LDLMVVKFLTQYETKPIYIFGGMGFLLFLGAILSAGGGIALRVIEGIHLNRTPLPLISAMCVITGMMCILLGLVAELLVR
IYFESQDKTAYTVKTVIRGKGGKG

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=233, Percent_Identity=31.3304721030043, Blast_Score=95, Evalue=1e-19,
Organism=Escherichia coli, GI1788588, Length=318, Percent_Identity=33.9622641509434, Blast_Score=178, Evalue=5e-46,
Organism=Escherichia coli, GI1788692, Length=311, Percent_Identity=27.3311897106109, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1787259, Length=117, Percent_Identity=34.1880341880342, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71999402, Length=223, Percent_Identity=30.0448430493274, Blast_Score=78, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6325441, Length=254, Percent_Identity=26.7716535433071, Blast_Score=79, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24585265, Length=231, Percent_Identity=29.4372294372294, Blast_Score=91, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 37711; Mature: 37711

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASPDVSPSAPTVPPVTPSASGADPELLSVIIPLYNEEENVARLCEAVFGALRDMARPF
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCE
EVIMVDDGSSDGTVARLETLAPSYPELTVVTFKRNVGQTAAIMAGIDHSHGAIIVPMDGD
EEEEEECCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCEEEEECCCC
LQNDPRDIPILLEKMKEGYDVVSGWRKDRQDDALTRNFPSAVANWLISTISGVHLKDYGC
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCEEECCCC
TLKAYRREVLSGYRLYGEMHRFVPIYARWQGAKITEIPVRHHARTAGQSKYGLNRIFKVL
HHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEECCHHHHHHHCCCCHHHHHHHHHHH
LDLMVVKFLTQYETKPIYIFGGMGFLLFLGAILSAGGGIALRVIEGIHLNRTPLPLISAM
HHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHH
CVITGMMCILLGLVAELLVRIYFESQDKTAYTVKTVIRGKGGKG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHCCCCCCC
>Mature Secondary Structure
MNASPDVSPSAPTVPPVTPSASGADPELLSVIIPLYNEEENVARLCEAVFGALRDMARPF
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCE
EVIMVDDGSSDGTVARLETLAPSYPELTVVTFKRNVGQTAAIMAGIDHSHGAIIVPMDGD
EEEEEECCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCEEEEECCCC
LQNDPRDIPILLEKMKEGYDVVSGWRKDRQDDALTRNFPSAVANWLISTISGVHLKDYGC
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCEEECCCC
TLKAYRREVLSGYRLYGEMHRFVPIYARWQGAKITEIPVRHHARTAGQSKYGLNRIFKVL
HHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEECCHHHHHHHCCCCHHHHHHHHHHH
LDLMVVKFLTQYETKPIYIFGGMGFLLFLGAILSAGGGIALRVIEGIHLNRTPLPLISAM
HHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHH
CVITGMMCILLGLVAELLVRIYFESQDKTAYTVKTVIRGKGGKG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA