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The map label for this gene is yadS [H]

Identifier: 83592327

GI number: 83592327

Start: 1179289

End: 1180005

Strand: Direct

Name: yadS [H]

Synonym: Rru_A0991

Alternate gene names: 83592327

Gene position: 1179289-1180005 (Clockwise)

Preceding gene: 83592323

Following gene: 83592328

Centisome position: 27.09

GC content: 65.83

Gene sequence:

>717_bases
ATGGCCTTGTCGCCGACTCCGACGGTTTTCCCCTTTGTTTCCCGCGGTGAGCGGGGTTTTCTGGAGCGCGGCATGGATCC
GGTTCTGACCTGGCTTGACACCTTCGGCCTGATCGTTTTCGCCGTGTCCGGGGGGCTGGTGGCGGCGCGCAAGGGCATGG
ATATCGTTGGCTTCGCCCTGATGGCGACGGTCACCGGCATCGGCGGCGGCACCTTCCGCGACATGGTGTTGGGGATGACG
CCGGTCTTCTGGGTGCGCGAGCCCCATTATCTGGTGGTCTGTCTGGCTGTCGGTATCCTGACGTGGTTCGTCGCCCATCG
CCTGGATTCGCGCCAAAGGGCGCTGTTGTGGGCCGACGCCATCGGCATCGCCTTTTTTACGGTGGTCGGTACCCAGGTCG
GTCTGCGCGCCGAGGCCGGCATTTCCGTGGCCCTGCTGATGGGGGTGATGACCGCCTGCTTCGGTGGCATCGTCCGCGAC
CTTCTGGCCGGCGAGCCGAGCCTGATCCTTCAGCGCGAGATCTACATCACCGCCTGCGTCGCCGGCGCCTGCGCCTATCT
GCTGTTTGACGCCATGGGAGCGGGCGAGGGCGTTTCGGGGGTGGTGTCCTTCTGCGTGACCTTCCTGGTGCGCGGCGCGG
CCCTGGCCTTCGGTCTCAGCCTGCCGGGCTATCGCGACAAAATCGATCGCAGCCAGGGTGGAACGGGCAAGGGATGA

Upstream 100 bases:

>100_bases
GTGTTTTGAAACTTTTATTCCCCCTTTGATGGTGCCGATGCCCGACCGCGCCCGACCTGCGGTTCAAGGGCTCTCGCGGT
CTTGACGCCCGTCGGCGAAC

Downstream 100 bases:

>100_bases
GCCAAAGGCGGCTGGTTCTTGACCGCGGTCTTCGCGCTGCGTAGCATGGCATCCATGAACAGCGTCTTTCCGATCACCCT
GCGGCGAATTACTAACCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MALSPTPTVFPFVSRGERGFLERGMDPVLTWLDTFGLIVFAVSGGLVAARKGMDIVGFALMATVTGIGGGTFRDMVLGMT
PVFWVREPHYLVVCLAVGILTWFVAHRLDSRQRALLWADAIGIAFFTVVGTQVGLRAEAGISVALLMGVMTACFGGIVRD
LLAGEPSLILQREIYITACVAGACAYLLFDAMGAGEGVSGVVSFCVTFLVRGAALAFGLSLPGYRDKIDRSQGGTGKG

Sequences:

>Translated_238_residues
MALSPTPTVFPFVSRGERGFLERGMDPVLTWLDTFGLIVFAVSGGLVAARKGMDIVGFALMATVTGIGGGTFRDMVLGMT
PVFWVREPHYLVVCLAVGILTWFVAHRLDSRQRALLWADAIGIAFFTVVGTQVGLRAEAGISVALLMGVMTACFGGIVRD
LLAGEPSLILQREIYITACVAGACAYLLFDAMGAGEGVSGVVSFCVTFLVRGAALAFGLSLPGYRDKIDRSQGGTGKG
>Mature_237_residues
ALSPTPTVFPFVSRGERGFLERGMDPVLTWLDTFGLIVFAVSGGLVAARKGMDIVGFALMATVTGIGGGTFRDMVLGMTP
VFWVREPHYLVVCLAVGILTWFVAHRLDSRQRALLWADAIGIAFFTVVGTQVGLRAEAGISVALLMGVMTACFGGIVRDL
LAGEPSLILQREIYITACVAGACAYLLFDAMGAGEGVSGVVSFCVTFLVRGAALAFGLSLPGYRDKIDRSQGGTGKG

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=199, Percent_Identity=41.7085427135678, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI87082304, Length=160, Percent_Identity=35, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 25078; Mature: 24947

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSPTPTVFPFVSRGERGFLERGMDPVLTWLDTFGLIVFAVSGGLVAARKGMDIVGFAL
CCCCCCCCCCHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHH
MATVTGIGGGTFRDMVLGMTPVFWVREPHYLVVCLAVGILTWFVAHRLDSRQRALLWADA
HHHHHCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IGIAFFTVVGTQVGLRAEAGISVALLMGVMTACFGGIVRDLLAGEPSLILQREIYITACV
HHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH
AGACAYLLFDAMGAGEGVSGVVSFCVTFLVRGAALAFGLSLPGYRDKIDRSQGGTGKG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ALSPTPTVFPFVSRGERGFLERGMDPVLTWLDTFGLIVFAVSGGLVAARKGMDIVGFAL
CCCCCCCCCHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHH
MATVTGIGGGTFRDMVLGMTPVFWVREPHYLVVCLAVGILTWFVAHRLDSRQRALLWADA
HHHHHCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
IGIAFFTVVGTQVGLRAEAGISVALLMGVMTACFGGIVRDLLAGEPSLILQREIYITACV
HHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH
AGACAYLLFDAMGAGEGVSGVVSFCVTFLVRGAALAFGLSLPGYRDKIDRSQGGTGKG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA