| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592304
Identifier: 83592304
GI number: 83592304
Start: 1153010
End: 1153954
Strand: Direct
Name: 83592304
Synonym: Rru_A0968
Alternate gene names: NA
Gene position: 1153010-1153954 (Clockwise)
Preceding gene: 83592303
Following gene: 83592305
Centisome position: 26.49
GC content: 67.83
Gene sequence:
>945_bases ATGACGGTGCCGCGCCCGATCGATCGCCGGTCCGGGGATCTGCCCGTCGATGTCGACGCCACCGAGGCCCTGTTGGCCGG CGGTGGCTATCTGGCCGAACGCGCCCTGTCGACGGCGCTGTTCCTCGCCCTGTCCCTGGGACGGCCGCTGTTTCTGGAAG GCGAGGCCGGGGTCGGCAAGACCGAGGTGGCCAAGGTCCTGGCCGAAACCCTGGGGCGGCGGCTATTGCGCCTGCAATGC TACGAGGGGCTTGATCTGGCCCAGGCGGCCTATGAATGGAACTTCGCCCGCCAGATGCTGGAGATCCGCCTGGGCGAGGC GAGCGGTGAGTCGCGCGAGCGCCTGGAGGCCGGGCTGTTTTCCGAGCGCTTCCTGATCAAGCGGCCGCTGCTTCAGGCCC TGGAGGTCCACGAGGGCGGGCCGCCGGTGCTGCTGATCGACGAGCTCGACCGCGCCGATGAACCCTTCGAGGCCTTTTTG CTCGAGGTTCTGGCCGATCATCAGGTCAGCATTCCCGAAATCGGCGTGATCCGCGCCGCCCAACCGCCGCTGGTCATCCT GACCTCGAACCGCACCCGCGAGATCCACGACGCGGTCAAACGCCGCTGCTTCTATCACTGGGTCGATTATCCCGATGCCG CCCGCGAACTGGCGATCCTGCGGCGCAAGGCCCCCGAGGCGCCCGAGGCCCTGTCGCGTCAGATCGTCGCCTTCGTTCAA AAGATCCGCTCGATGGATCTGTTCAAGCCCCCCGGCGTCGCCGAAACCATCGATTGGGCCCAGGCGCTGACCCGCCTTGA TAAGCTGGCCCTCGATCCCGAGACGATCAACGACACCCTGGGCACCTTGCTGAAGTACCAAGAAGACATCGGCCGCCTGC GCGGGTCCGAGTCCGCCCGGGTGCTGGCGGCGGTGCGTGAGGGCGCGGCGGAGGCGGGAAGGTGA
Upstream 100 bases:
>100_bases GAGTCTCGCCCGCCCGGCTCAATGAGGATATCCACGGCGATGGCGCCTATCGCGCCCATTTGATCGGGGTGATGGCCGGG CGGGCGGTGAGCGCCTGCCA
Downstream 100 bases:
>100_bases GCGGCGAGCGGCCGCCCCCGGCCAATCTGGTGATGGCGACGGCCGATGGCGGGCGTCTGGCGGAAAATATCGTGCATTTC GCCCGGGTTCTGCGCGGGGC
Product: ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; MoxR-Like ATPase; AAA Family ATPase; AAA_5 ATPase; AAA ATPase; ATPase Associated With Various Cellular Activities; ATPase Central Domain-Containing Protein; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; ATPase AAA Family Protein; MoxR Family ATPase; ATP-Dependent Protease; ATPase Aaa Family; Aaa ATPase; ATPase-Like Protein; Chaperone ClpB; Oligopeptide ABC Transporter; Membrane Oxidoreductase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; Carbon Monoxide Dehydrogenase Accesory Protein; ClpA/ClpB Family Protein; AAA ATPase Family Protein; MoxR-Like ATPase CoxD; ATPase Protein
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MTVPRPIDRRSGDLPVDVDATEALLAGGGYLAERALSTALFLALSLGRPLFLEGEAGVGKTEVAKVLAETLGRRLLRLQC YEGLDLAQAAYEWNFARQMLEIRLGEASGESRERLEAGLFSERFLIKRPLLQALEVHEGGPPVLLIDELDRADEPFEAFL LEVLADHQVSIPEIGVIRAAQPPLVILTSNRTREIHDAVKRRCFYHWVDYPDAARELAILRRKAPEAPEALSRQIVAFVQ KIRSMDLFKPPGVAETIDWAQALTRLDKLALDPETINDTLGTLLKYQEDIGRLRGSESARVLAAVREGAAEAGR
Sequences:
>Translated_314_residues MTVPRPIDRRSGDLPVDVDATEALLAGGGYLAERALSTALFLALSLGRPLFLEGEAGVGKTEVAKVLAETLGRRLLRLQC YEGLDLAQAAYEWNFARQMLEIRLGEASGESRERLEAGLFSERFLIKRPLLQALEVHEGGPPVLLIDELDRADEPFEAFL LEVLADHQVSIPEIGVIRAAQPPLVILTSNRTREIHDAVKRRCFYHWVDYPDAARELAILRRKAPEAPEALSRQIVAFVQ KIRSMDLFKPPGVAETIDWAQALTRLDKLALDPETINDTLGTLLKYQEDIGRLRGSESARVLAAVREGAAEAGR >Mature_313_residues TVPRPIDRRSGDLPVDVDATEALLAGGGYLAERALSTALFLALSLGRPLFLEGEAGVGKTEVAKVLAETLGRRLLRLQCY EGLDLAQAAYEWNFARQMLEIRLGEASGESRERLEAGLFSERFLIKRPLLQALEVHEGGPPVLLIDELDRADEPFEAFLL EVLADHQVSIPEIGVIRAAQPPLVILTSNRTREIHDAVKRRCFYHWVDYPDAARELAILRRKAPEAPEALSRQIVAFVQK IRSMDLFKPPGVAETIDWAQALTRLDKLALDPETINDTLGTLLKYQEDIGRLRGSESARVLAAVREGAAEAGR
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34776; Mature: 34645
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPRPIDRRSGDLPVDVDATEALLAGGGYLAERALSTALFLALSLGRPLFLEGEAGVGK CCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH TEVAKVLAETLGRRLLRLQCYEGLDLAQAAYEWNFARQMLEIRLGEASGESRERLEAGLF HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SERFLIKRPLLQALEVHEGGPPVLLIDELDRADEPFEAFLLEVLADHQVSIPEIGVIRAA HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECC QPPLVILTSNRTREIHDAVKRRCFYHWVDYPDAARELAILRRKAPEAPEALSRQIVAFVQ CCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH KIRSMDLFKPPGVAETIDWAQALTRLDKLALDPETINDTLGTLLKYQEDIGRLRGSESAR HHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH VLAAVREGAAEAGR HHHHHHHHHHCCCC >Mature Secondary Structure TVPRPIDRRSGDLPVDVDATEALLAGGGYLAERALSTALFLALSLGRPLFLEGEAGVGK CCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH TEVAKVLAETLGRRLLRLQCYEGLDLAQAAYEWNFARQMLEIRLGEASGESRERLEAGLF HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SERFLIKRPLLQALEVHEGGPPVLLIDELDRADEPFEAFLLEVLADHQVSIPEIGVIRAA HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECC QPPLVILTSNRTREIHDAVKRRCFYHWVDYPDAARELAILRRKAPEAPEALSRQIVAFVQ CCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH KIRSMDLFKPPGVAETIDWAQALTRLDKLALDPETINDTLGTLLKYQEDIGRLRGSESAR HHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH VLAAVREGAAEAGR HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA