| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is cutL [H]
Identifier: 83592302
GI number: 83592302
Start: 1149768
End: 1152179
Strand: Direct
Name: cutL [H]
Synonym: Rru_A0966
Alternate gene names: 83592302
Gene position: 1149768-1152179 (Clockwise)
Preceding gene: 83592301
Following gene: 83592303
Centisome position: 26.41
GC content: 67.08
Gene sequence:
>2412_bases ATGCCCAGCGATTCAGCGACCGTGACCGATCTGCAGAGCGCCGCCCAGCGCAGCGGCATCGGCGTATCCGTGCGCCGCAA GGAAGACCGCCGCTTCCTGACCGGCCAGGGCACCTATACCGATGATATCGTCCGCCCGGGCATGGTTCATGCCTTCCTGC TGCGCTCGCCCCATGCCCATGCCCGCATCGCCGCCCTCGATGTCGGCCCGGCCCGCGCCGCCAAAGGGGTGCTCGCCGTG TTCACCGGGGCCGATATGGCCGCCGACAAGGTGGGGTCGATCCCCTGCGGCTGGGCGGTCGCCAATAAGGACGGCACGCC GATGGCCGAACCGCCCCATCCGGCGCTGGCGGTCGATCGGGTCCGTCACGTCGGCGATGCGGTGGCCGTGGTCATCGCCC GCACCCTGGCCCAGGCCAAGGACGCCGCCGAGCTGATCGAGATCGATTATCAGGATCTTCCCGTCGTCGTCGATCCGGCC CAGGCCCTGAACAGCCCGGCCATCCACGATCAGGCGCCGGGCAATCTGTGCTATGACTGGGAGATCGGCGACGCCGCCGC CGTCGAGGCCGCCTTCGCCCGCGCCCATCACATCACCCGGCTGGATCTGATCAACAACCGCCTGGTGCCCAACGCCATGG AGCCGCGCAGCTATATCGGCGAATATGACCGGGCGACGGGGGAATACACCCTGACCACCACCAGCCAGAACCCCCATGTC ATCCGCCTGCTGATGGGCGCCTTCGTGCTCAACATCCCCGAGCACAAGCTGCGCGTCGTCTCGCCCGATGTCGGCGGCGG CTTCGGCTCGAAGATCTATCATTACGCCGAGGAGGCCATCGTCACCTGGGCGGCGCCCAAGGTCGGCAAGCCGATCAAAT GGACCTCGGACCGCTCGGAGGCCTTTTTGTCCGATGCCCATGGCCGCGACCATGTCAGCCATGCCGAACTGGCCCTGGCC GAGGATGGCACCTTTCTGGCGCTGAAGGTCGACACCATCGCCAATCTCGGCGCCTATCTGTCGACCTTCTCGACGGCGGT GCCGACCTATCTATATGCGACGCTGCTGGCCGGGGTCTATCGCACGCCGGCCATCCATTGCCGGGTGCGCAGCGTCTTTA CCAATACGGTGCCCGTCGACGCCTATCGCGGGGCGGGGCGGCCGGAAGCCACCTATCTGATCGAGCGCATCGTCGACAAG GCCGCCCGCGAGATCGGCATGGACCGGGTGGCCTTGCGCCGCAAGAACTTCATCCCCGCCGATGCCTTCCCCTATCAAAC GCCCGTCGCCTTGCAATACGACAGCGGCGATTACGAGGCGACCTTGGGCAAGGCCCTGGTGCTGGCCGATGTCGAGGGCT TCGCCGCCCGGCGGGCCGAGGCGGAGGCGCGGGGGAAGGTGCGCGGCCTGGGCTATTCCACCTATCTGGAGGCGTGCGGC ATCGCCCCCTCGGCGGTGGTCGGCTCGCTGGGCGCCCGGGCGGGCTTGTTCGAATGCGCCGTGGTCCGCGTTCATCCCAC CGGCAGCGTCACCGTGCTGACCGGATCGCACAGCCACGGCCAGGGCCATGAAACGACCTTCGCCCAGTTGGTTTCCGACA CCCTGGGGCTGCCCATCGAAAATGTCGAGATCAGCCATGGCGACACCAATAAGGTGCCCTTTGGCATGGGCACCTATGGC TCGCGCTCGCTGGCCGTGGGCGGCGAGGCCTTGATGAAGGCCATGGGCAAGGTGGTGGACAAGGCGCGCAAGATCGCCGC CCATGCCCTGGAGGCCGCGGTCGAGGATGTGGAGTTCAAGGACGGCAGCTTCACCATCGCCGGCACCGACAAGGCGATGA CCTTCGCCCAGGTCGCGCTTACCGCCTATGTCCCCCACAATTTCCCCCATGACCAGCTTGAACCGGGGCTTGAGGAACAG GCCTTCTACGATCCGATGAACTTCACCTATCCCGGCGGCTGCCACATCTGCGAGGTCGAGATCGACCCGCAAACCGGCGT AGTCGAGGTCGTGGCGATGACGGCGGTCGATGATGTCGGGCGGGTGATCAATCCGATGATCGTTCACGGCCAGATCCATG GCGGACTGGCCCAGGGCATCGGTCAGGCGCTGATCGAGGGCTGCGCTTACGACGCCAACGGCCAGTTGGTCACCGGCAGT TTCATGGATTACGCCATGCCGCGCGCCGACCGCCTGCCCAGCTTCCGCGTCGATAACGCCGTTACCCTTTGCGCCCATAA CTCGCTGGGGGTGAAGGGCTGCGGTGAGGTCGGGGCCATCGGCAGTCCGCCCGCCGTCATCAACGCCGTGCTCGACGCCC TGGCGCCCTTGGGCGTGAGCGATATCGCCATGCCGGCCACGCCCTTCCGGGTTTGGCGGGCGATCGAGGCGGCGCGCGCC GCCGCCCAGTAG
Upstream 100 bases:
>100_bases CGAGGCCGGCCGCGCCGCCGCCCAATAGGCGCCTTTGGCGATCGAGCCGTCGTTTCCGCGCCCATTCCCCGCCCGATACC CCCTAAGGGAGGGTTAGTCT
Downstream 100 bases:
>100_bases CGTCGTTCCAGCCCTCGCCAAACCGAAGGTGATGCTATGTATGTCTTTGATTATCACCGCCCGAACTCGCTGGCCGATGC CCATGGCCTGCTGACCGCGC
Product: xanthine dehydrogenase, molybdenum binding subunit apoprotein
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 803; Mature: 802
Protein sequence:
>803_residues MPSDSATVTDLQSAAQRSGIGVSVRRKEDRRFLTGQGTYTDDIVRPGMVHAFLLRSPHAHARIAALDVGPARAAKGVLAV FTGADMAADKVGSIPCGWAVANKDGTPMAEPPHPALAVDRVRHVGDAVAVVIARTLAQAKDAAELIEIDYQDLPVVVDPA QALNSPAIHDQAPGNLCYDWEIGDAAAVEAAFARAHHITRLDLINNRLVPNAMEPRSYIGEYDRATGEYTLTTTSQNPHV IRLLMGAFVLNIPEHKLRVVSPDVGGGFGSKIYHYAEEAIVTWAAPKVGKPIKWTSDRSEAFLSDAHGRDHVSHAELALA EDGTFLALKVDTIANLGAYLSTFSTAVPTYLYATLLAGVYRTPAIHCRVRSVFTNTVPVDAYRGAGRPEATYLIERIVDK AAREIGMDRVALRRKNFIPADAFPYQTPVALQYDSGDYEATLGKALVLADVEGFAARRAEAEARGKVRGLGYSTYLEACG IAPSAVVGSLGARAGLFECAVVRVHPTGSVTVLTGSHSHGQGHETTFAQLVSDTLGLPIENVEISHGDTNKVPFGMGTYG SRSLAVGGEALMKAMGKVVDKARKIAAHALEAAVEDVEFKDGSFTIAGTDKAMTFAQVALTAYVPHNFPHDQLEPGLEEQ AFYDPMNFTYPGGCHICEVEIDPQTGVVEVVAMTAVDDVGRVINPMIVHGQIHGGLAQGIGQALIEGCAYDANGQLVTGS FMDYAMPRADRLPSFRVDNAVTLCAHNSLGVKGCGEVGAIGSPPAVINAVLDALAPLGVSDIAMPATPFRVWRAIEAARA AAQ
Sequences:
>Translated_803_residues MPSDSATVTDLQSAAQRSGIGVSVRRKEDRRFLTGQGTYTDDIVRPGMVHAFLLRSPHAHARIAALDVGPARAAKGVLAV FTGADMAADKVGSIPCGWAVANKDGTPMAEPPHPALAVDRVRHVGDAVAVVIARTLAQAKDAAELIEIDYQDLPVVVDPA QALNSPAIHDQAPGNLCYDWEIGDAAAVEAAFARAHHITRLDLINNRLVPNAMEPRSYIGEYDRATGEYTLTTTSQNPHV IRLLMGAFVLNIPEHKLRVVSPDVGGGFGSKIYHYAEEAIVTWAAPKVGKPIKWTSDRSEAFLSDAHGRDHVSHAELALA EDGTFLALKVDTIANLGAYLSTFSTAVPTYLYATLLAGVYRTPAIHCRVRSVFTNTVPVDAYRGAGRPEATYLIERIVDK AAREIGMDRVALRRKNFIPADAFPYQTPVALQYDSGDYEATLGKALVLADVEGFAARRAEAEARGKVRGLGYSTYLEACG IAPSAVVGSLGARAGLFECAVVRVHPTGSVTVLTGSHSHGQGHETTFAQLVSDTLGLPIENVEISHGDTNKVPFGMGTYG SRSLAVGGEALMKAMGKVVDKARKIAAHALEAAVEDVEFKDGSFTIAGTDKAMTFAQVALTAYVPHNFPHDQLEPGLEEQ AFYDPMNFTYPGGCHICEVEIDPQTGVVEVVAMTAVDDVGRVINPMIVHGQIHGGLAQGIGQALIEGCAYDANGQLVTGS FMDYAMPRADRLPSFRVDNAVTLCAHNSLGVKGCGEVGAIGSPPAVINAVLDALAPLGVSDIAMPATPFRVWRAIEAARA AAQ >Mature_802_residues PSDSATVTDLQSAAQRSGIGVSVRRKEDRRFLTGQGTYTDDIVRPGMVHAFLLRSPHAHARIAALDVGPARAAKGVLAVF TGADMAADKVGSIPCGWAVANKDGTPMAEPPHPALAVDRVRHVGDAVAVVIARTLAQAKDAAELIEIDYQDLPVVVDPAQ ALNSPAIHDQAPGNLCYDWEIGDAAAVEAAFARAHHITRLDLINNRLVPNAMEPRSYIGEYDRATGEYTLTTTSQNPHVI RLLMGAFVLNIPEHKLRVVSPDVGGGFGSKIYHYAEEAIVTWAAPKVGKPIKWTSDRSEAFLSDAHGRDHVSHAELALAE DGTFLALKVDTIANLGAYLSTFSTAVPTYLYATLLAGVYRTPAIHCRVRSVFTNTVPVDAYRGAGRPEATYLIERIVDKA AREIGMDRVALRRKNFIPADAFPYQTPVALQYDSGDYEATLGKALVLADVEGFAARRAEAEARGKVRGLGYSTYLEACGI APSAVVGSLGARAGLFECAVVRVHPTGSVTVLTGSHSHGQGHETTFAQLVSDTLGLPIENVEISHGDTNKVPFGMGTYGS RSLAVGGEALMKAMGKVVDKARKIAAHALEAAVEDVEFKDGSFTIAGTDKAMTFAQVALTAYVPHNFPHDQLEPGLEEQA FYDPMNFTYPGGCHICEVEIDPQTGVVEVVAMTAVDDVGRVINPMIVHGQIHGGLAQGIGQALIEGCAYDANGQLVTGSF MDYAMPRADRLPSFRVDNAVTLCAHNSLGVKGCGEVGAIGSPPAVINAVLDALAPLGVSDIAMPATPFRVWRAIEAARAA AQ
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=781, Percent_Identity=26.3764404609475, Blast_Score=159, Evalue=1e-38, Organism=Homo sapiens, GI91823271, Length=755, Percent_Identity=25.4304635761589, Blast_Score=152, Evalue=9e-37, Organism=Escherichia coli, GI1789230, Length=778, Percent_Identity=29.1773778920308, Blast_Score=245, Evalue=7e-66, Organism=Escherichia coli, GI1789246, Length=833, Percent_Identity=25.0900360144058, Blast_Score=182, Evalue=1e-46, Organism=Escherichia coli, GI1786478, Length=747, Percent_Identity=26.9076305220884, Blast_Score=131, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17539860, Length=787, Percent_Identity=24.1423125794155, Blast_Score=149, Evalue=7e-36, Organism=Caenorhabditis elegans, GI17540638, Length=814, Percent_Identity=24.3243243243243, Blast_Score=138, Evalue=1e-32, Organism=Caenorhabditis elegans, GI32566215, Length=767, Percent_Identity=23.8591916558018, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI17737937, Length=747, Percent_Identity=25.7028112449799, Blast_Score=149, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 85244; Mature: 85112
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSDSATVTDLQSAAQRSGIGVSVRRKEDRRFLTGQGTYTDDIVRPGMVHAFLLRSPHAH CCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCHHHCCCCHHHHHHHCCCCCC ARIAALDVGPARAAKGVLAVFTGADMAADKVGSIPCGWAVANKDGTPMAEPPHPALAVDR EEEEEEECCHHHHHCCEEEEEECCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHH VRHVGDAVAVVIARTLAQAKDAAELIEIDYQDLPVVVDPAQALNSPAIHDQAPGNLCYDW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCCCCCCCEEEEE EIGDAAAVEAAFARAHHITRLDLINNRLVPNAMEPRSYIGEYDRATGEYTLTTTSQNPHV ECCCHHHHHHHHHHHHHHEEHHHHCCCCCCCCCCCHHHHCHHHCCCCCEEEEECCCCCHH IRLLMGAFVLNIPEHKLRVVSPDVGGGFGSKIYHYAEEAIVTWAAPKVGKPIKWTSDRSE HHHHHHHHHHCCCCHHEEEECCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCEECCCCHH AFLSDAHGRDHVSHAELALAEDGTFLALKVDTIANLGAYLSTFSTAVPTYLYATLLAGVY HHHHCCCCCCCCCHHHEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTPAIHCRVRSVFTNTVPVDAYRGAGRPEATYLIERIVDKAAREIGMDRVALRRKNFIPA CCCCCEEEEEEHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCC DAFPYQTPVALQYDSGDYEATLGKALVLADVEGFAARRAEAEARGKVRGLGYSTYLEACG CCCCCCCCEEEEECCCCCHHHHCCEEEEEECHHHHHHHHHHHHCCCEECCCHHHHHHHHC IAPSAVVGSLGARAGLFECAVVRVHPTGSVTVLTGSHSHGQGHETTFAQLVSDTLGLPIE CCHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC NVEISHGDTNKVPFGMGTYGSRSLAVGGEALMKAMGKVVDKARKIAAHALEAAVEDVEFK EEEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEC DGSFTIAGTDKAMTFAQVALTAYVPHNFPHDQLEPGLEEQAFYDPMNFTYPGGCHICEVE CCCEEEECCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCEEEEEE IDPQTGVVEVVAMTAVDDVGRVINPMIVHGQIHGGLAQGIGQALIEGCAYDANGQLVTGS ECCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEECC FMDYAMPRADRLPSFRVDNAVTLCAHNSLGVKGCGEVGAIGSPPAVINAVLDALAPLGVS HHHHHCCCHHCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC DIAMPATPFRVWRAIEAARAAAQ HHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PSDSATVTDLQSAAQRSGIGVSVRRKEDRRFLTGQGTYTDDIVRPGMVHAFLLRSPHAH CCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCHHHCCCCHHHHHHHCCCCCC ARIAALDVGPARAAKGVLAVFTGADMAADKVGSIPCGWAVANKDGTPMAEPPHPALAVDR EEEEEEECCHHHHHCCEEEEEECCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHH VRHVGDAVAVVIARTLAQAKDAAELIEIDYQDLPVVVDPAQALNSPAIHDQAPGNLCYDW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCCCCCCCEEEEE EIGDAAAVEAAFARAHHITRLDLINNRLVPNAMEPRSYIGEYDRATGEYTLTTTSQNPHV ECCCHHHHHHHHHHHHHHEEHHHHCCCCCCCCCCCHHHHCHHHCCCCCEEEEECCCCCHH IRLLMGAFVLNIPEHKLRVVSPDVGGGFGSKIYHYAEEAIVTWAAPKVGKPIKWTSDRSE HHHHHHHHHHCCCCHHEEEECCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCEECCCCHH AFLSDAHGRDHVSHAELALAEDGTFLALKVDTIANLGAYLSTFSTAVPTYLYATLLAGVY HHHHCCCCCCCCCHHHEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTPAIHCRVRSVFTNTVPVDAYRGAGRPEATYLIERIVDKAAREIGMDRVALRRKNFIPA CCCCCEEEEEEHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCC DAFPYQTPVALQYDSGDYEATLGKALVLADVEGFAARRAEAEARGKVRGLGYSTYLEACG CCCCCCCCEEEEECCCCCHHHHCCEEEEEECHHHHHHHHHHHHCCCEECCCHHHHHHHHC IAPSAVVGSLGARAGLFECAVVRVHPTGSVTVLTGSHSHGQGHETTFAQLVSDTLGLPIE CCHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC NVEISHGDTNKVPFGMGTYGSRSLAVGGEALMKAMGKVVDKARKIAAHALEAAVEDVEFK EEEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEC DGSFTIAGTDKAMTFAQVALTAYVPHNFPHDQLEPGLEEQAFYDPMNFTYPGGCHICEVE CCCEEEECCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCEEEEEE IDPQTGVVEVVAMTAVDDVGRVINPMIVHGQIHGGLAQGIGQALIEGCAYDANGQLVTGS ECCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEECC FMDYAMPRADRLPSFRVDNAVTLCAHNSLGVKGCGEVGAIGSPPAVINAVLDALAPLGVS HHHHHCCCHHCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC DIAMPATPFRVWRAIEAARAAAQ HHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]