| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is yqeB [C]
Identifier: 83592300
GI number: 83592300
Start: 1148599
End: 1148955
Strand: Reverse
Name: yqeB [C]
Synonym: Rru_A0964
Alternate gene names: 83592300
Gene position: 1148955-1148599 (Counterclockwise)
Preceding gene: 83592308
Following gene: 83592299
Centisome position: 26.4
GC content: 68.07
Gene sequence:
>357_bases ATGACCGCCATGCCGTCTGCCATCAGTGCCGGGGGGTTTGAGCCCGAGGGGGATCCCCTGAGGGAAGCCGAGATCTGGCT GGGCCAGGGTCGGCGGGTGGCCTTGGCCACGGTGATCTCGACCTGGGGCAGTTCGCCCCGGCCGGTCGGCTCGATGCTGG TCGTCGACAGCAAGGGGGCCTTTGTCGGCTCGGTCTCGGGCGGCTGCATCGAAGGCGCGGTGATCGCCGAGGCGATGGAG GTGATCGCCGAAGGCACGCCCAAGATCCTCGATTTCTCGGTATCGAGCGAACGGGCCTGGGATGTCGGGCTGTCGTGCGG CGGGCGGATCCAGGTGTTCGTGGAAGCCCTGCGATGA
Upstream 100 bases:
>100_bases ATGGGCCGGTCCAGAGAATTTATCCGCCCTTGCCAGCTTAGCGATCCGCGCCAATCTTGGCGAAGCGCCCCACCCTACGG CCCGCCACAAGGGATAAAGG
Downstream 100 bases:
>100_bases CACCGAAGATCGAGGCGCTTTTCAACGACGCGCTGATCGCCGCGGCGGCGCGAACGCCGCGCGGTCCCACCCCCACCCAC GCCGATTTCCACGTTCACCG
Product: sulfurylase small subunit, molybdopterin cytosine dinucleotide biosynthesis
Products: NA
Alternate protein names: Xanthine Dehydrogenase Accessory Factor; Carbon Monoxide Dehydrogenase Accessory Protein; Xanthine Dehydrogenase; XdhC And CoxI Family; Xanthine And CO Dehydrogenase Maturation Factor; Lipoprotein; Xanthine Dehydrogenase Accessory Factor XdhC/CoxI; XdhC/CoxF Family Protein; Xanthine And Co Dehydrogenase Maturation Factor; CoxI Protein; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Accessory Factor Subfamily; Xanthine Dehydrogenase Accessory Factor Subfamily Putative; XdhC Family Protein; Xanthine/CO Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTAMPSAISAGGFEPEGDPLREAEIWLGQGRRVALATVISTWGSSPRPVGSMLVVDSKGAFVGSVSGGCIEGAVIAEAME VIAEGTPKILDFSVSSERAWDVGLSCGGRIQVFVEALR
Sequences:
>Translated_118_residues MTAMPSAISAGGFEPEGDPLREAEIWLGQGRRVALATVISTWGSSPRPVGSMLVVDSKGAFVGSVSGGCIEGAVIAEAME VIAEGTPKILDFSVSSERAWDVGLSCGGRIQVFVEALR >Mature_117_residues TAMPSAISAGGFEPEGDPLREAEIWLGQGRRVALATVISTWGSSPRPVGSMLVVDSKGAFVGSVSGGCIEGAVIAEAMEV IAEGTPKILDFSVSSERAWDVGLSCGGRIQVFVEALR
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12196; Mature: 12065
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMPSAISAGGFEPEGDPLREAEIWLGQGRRVALATVISTWGSSPRPVGSMLVVDSKGA CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEHHHHHHHHCCCCCCCCCEEEEEECCCC FVGSVSGGCIEGAVIAEAMEVIAEGTPKILDFSVSSERAWDVGLSCGGRIQVFVEALR EEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCCCHHHHHEEECC >Mature Secondary Structure TAMPSAISAGGFEPEGDPLREAEIWLGQGRRVALATVISTWGSSPRPVGSMLVVDSKGA CCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEHHHHHHHHCCCCCCCCCEEEEEECCCC FVGSVSGGCIEGAVIAEAMEVIAEGTPKILDFSVSSERAWDVGLSCGGRIQVFVEALR EEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCCCHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA