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The map label for this gene is hypA2 [H]

Identifier: 83592264

GI number: 83592264

Start: 1104553

End: 1104939

Strand: Reverse

Name: hypA2 [H]

Synonym: Rru_A0928

Alternate gene names: 83592264

Gene position: 1104939-1104553 (Counterclockwise)

Preceding gene: 83592266

Following gene: 83592263

Centisome position: 25.38

GC content: 63.57

Gene sequence:

>387_bases
ATGCATGAACTGACGGTGGTCGAAGGGCTGATGGGGATTTTGACATCCCACGCCAAGGCCAATGCCATCGCCCGCATCAC
CAGCGTTCACGTCGTCATCGGCCGCCTACGCGGCCTTGATCGCCGCCAGATCGCCGGCTGCTTTGAAATCCTGGCCGAGG
GCACCCTGGCCGAGGGCGCCCGCCTGGATATCGAGGAAATCGGCATCGAAGGCCGCTGCCGCGACTGCGGCCAAACCTTC
GCCGTGCCCGGCTTCCAGATCCAATGCCCGACGTGCTCCAGCGTCGCCGTCGATCTGCTCAGCGGCCAGGAGCTCCACAT
AAAAACCTTCGAAGGCAAAACCCTGGAAGACCTGGGCGTCGAGGAAAGCGCCGCAAGCACGACCTGA

Upstream 100 bases:

>100_bases
CACCGGCCAAGCCCGTTACATCAAGGGTCGGACCATGGGCCTGCCATGCCCCCCCTAGGCGAGGGGCCCGCGCCTTTGCT
GGAATAAGGACGCGACGGCC

Downstream 100 bases:

>100_bases
CCCCGGGCGCCAGCGCCGCCTTCGCCCCATATGGAAGGGCCCCCGCCCGTCCCGCTGATCGGGATCGGGCGCCGGTCTTG
TTCCTCGTCGCGTGAAGGCT

Product: hydrogenase expression/synthesis, HypA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MHELTVVEGLMGILTSHAKANAIARITSVHVVIGRLRGLDRRQIAGCFEILAEGTLAEGARLDIEEIGIEGRCRDCGQTF
AVPGFQIQCPTCSSVAVDLLSGQELHIKTFEGKTLEDLGVEESAASTT

Sequences:

>Translated_128_residues
MHELTVVEGLMGILTSHAKANAIARITSVHVVIGRLRGLDRRQIAGCFEILAEGTLAEGARLDIEEIGIEGRCRDCGQTF
AVPGFQIQCPTCSSVAVDLLSGQELHIKTFEGKTLEDLGVEESAASTT
>Mature_128_residues
MHELTVVEGLMGILTSHAKANAIARITSVHVVIGRLRGLDRRQIAGCFEILAEGTLAEGARLDIEEIGIEGRCRDCGQTF
AVPGFQIQCPTCSSVAVDLLSGQELHIKTFEGKTLEDLGVEESAASTT

Specific function: Probably plays a role in an hydrogenase nickel cofactor insertion step [H]

COG id: COG0375

COG function: function code R; Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypA/hybF family [H]

Homologues:

Organism=Escherichia coli, GI1789365, Length=111, Percent_Identity=29.7297297297297, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000688
- InterPro:   IPR020538 [H]

Pfam domain/function: PF01155 HypA [H]

EC number: NA

Molecular weight: Translated: 13651; Mature: 13651

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS01249 HYPA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHELTVVEGLMGILTSHAKANAIARITSVHVVIGRLRGLDRRQIAGCFEILAEGTLAEGA
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
RLDIEEIGIEGRCRDCGQTFAVPGFQIQCPTCSSVAVDLLSGQELHIKTFEGKTLEDLGV
CCCHHHCCCCCCCCCCCCEECCCCEEEECCCCHHHHHHHHCCCEEEEEECCCCCHHHCCC
EESAASTT
CCCCCCCC
>Mature Secondary Structure
MHELTVVEGLMGILTSHAKANAIARITSVHVVIGRLRGLDRRQIAGCFEILAEGTLAEGA
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
RLDIEEIGIEGRCRDCGQTFAVPGFQIQCPTCSSVAVDLLSGQELHIKTFEGKTLEDLGV
CCCHHHCCCCCCCCCCCCEECCCCEEEECCCCHHHHHHHHCCCEEEEEECCCCCHHHCCC
EESAASTT
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA