| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83592259
Identifier: 83592259
GI number: 83592259
Start: 1097019
End: 1097930
Strand: Reverse
Name: 83592259
Synonym: Rru_A0923
Alternate gene names: NA
Gene position: 1097930-1097019 (Counterclockwise)
Preceding gene: 83592263
Following gene: 83592258
Centisome position: 25.22
GC content: 64.04
Gene sequence:
>912_bases ATGACTGTTATCGGTCTGCTCGCCGCATTCGGTGGCGGGATCTTCGGCGCTGCGATCGGCGCCTTGCCGGCCTTCGAATT CGTCGGCTTCCTAGTGATGATCGGCGTCGCCGTTCAAATCGGCGTTTCTCCCGCCGAGACCAATTTCTTCGGCATTCCCT TTGGCATGTTCGGCCCCCATGTCGGCGGTTTCGCCTCGGGTGTCGCCGCCGCCGCCTATGCGGCCAGCCGGGGCAAGCTT GATAGCGGCCGCAATATCGTGGCCGGCATGATGGGCCTCAACAGTCCCGACGTTCTGCTCGTCGGCGGCGCCTTCGGCAT CCTTGGCTATCTCATCCAGTGGGGGTTGGCCCAGGTTCCCAATTTCGGCGCCGGCATTCCCTGGACCGATACGGTGGCCC TGACCGTGGTGATCTCGGCGATCATCGCCCGCCTGCTGTTTGGCAAGACCGGCCTGTTTGGCAAGGCCGAGCCCGGTCGC GCCTTCTATGCGCCGTCCGACAAGGCGAAATGGCTGTCTTTCCAAAGCGAGCCGCTGCAATTGACGGTGATCGGCCTCGG CGTCGGCCTGATGGCGGGCTATCTTGGCGCCACCTATGGCGCGCCGGGCGTGTTCTTGTCCTTCGGCATCGCCGCCGCCA GCTTGATCTTCCTGCAGTTCGGCGTGCTGGTTCCGGTCAGCCATCACATCGCCCTGCCCGCGGCCATCGTTGCGGCCAGT TCGGGCAGCATCGTCTGGGCGGGCATCGCCGGCATCTTGTGCGCCTTCGTCGGCGAGTTCTATGCCCGCACCTTCCTGTC CCACGGCGATACCCACATCGATCCGCCGGCCTGCACCATCGCGACGATGACGCTGATCTTCAATTTCCTGACCTCGGTCG GCTTCTGGACCATCGCCCACATTCCCTTCTAA
Upstream 100 bases:
>100_bases ACCGGAGATCGACCTCCCCAAAGGATGGGCGCCGGAGCGTGAAAACAACGGGGCACGGGAATTCCGGGTCTCTGGATCGG GTAACACCCTGGAGGAAACA
Downstream 100 bases:
>100_bases TCCCGACGCCTCAGCCTCCCAAGCGGCGCGTGACGGCCCCCCGGCCGCCCCGCGCCGCTCTTTTTTTGTCTTCACGATGG CTCCAACCCGGTAGGTCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTVIGLLAAFGGGIFGAAIGALPAFEFVGFLVMIGVAVQIGVSPAETNFFGIPFGMFGPHVGGFASGVAAAAYAASRGKL DSGRNIVAGMMGLNSPDVLLVGGAFGILGYLIQWGLAQVPNFGAGIPWTDTVALTVVISAIIARLLFGKTGLFGKAEPGR AFYAPSDKAKWLSFQSEPLQLTVIGLGVGLMAGYLGATYGAPGVFLSFGIAAASLIFLQFGVLVPVSHHIALPAAIVAAS SGSIVWAGIAGILCAFVGEFYARTFLSHGDTHIDPPACTIATMTLIFNFLTSVGFWTIAHIPF
Sequences:
>Translated_303_residues MTVIGLLAAFGGGIFGAAIGALPAFEFVGFLVMIGVAVQIGVSPAETNFFGIPFGMFGPHVGGFASGVAAAAYAASRGKL DSGRNIVAGMMGLNSPDVLLVGGAFGILGYLIQWGLAQVPNFGAGIPWTDTVALTVVISAIIARLLFGKTGLFGKAEPGR AFYAPSDKAKWLSFQSEPLQLTVIGLGVGLMAGYLGATYGAPGVFLSFGIAAASLIFLQFGVLVPVSHHIALPAAIVAAS SGSIVWAGIAGILCAFVGEFYARTFLSHGDTHIDPPACTIATMTLIFNFLTSVGFWTIAHIPF >Mature_302_residues TVIGLLAAFGGGIFGAAIGALPAFEFVGFLVMIGVAVQIGVSPAETNFFGIPFGMFGPHVGGFASGVAAAAYAASRGKLD SGRNIVAGMMGLNSPDVLLVGGAFGILGYLIQWGLAQVPNFGAGIPWTDTVALTVVISAIIARLLFGKTGLFGKAEPGRA FYAPSDKAKWLSFQSEPLQLTVIGLGVGLMAGYLGATYGAPGVFLSFGIAAASLIFLQFGVLVPVSHHIALPAAIVAASS GSIVWAGIAGILCAFVGEFYARTFLSHGDTHIDPPACTIATMTLIFNFLTSVGFWTIAHIPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31008; Mature: 30877
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVIGLLAAFGGGIFGAAIGALPAFEFVGFLVMIGVAVQIGVSPAETNFFGIPFGMFGPH CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHCCCC VGGFASGVAAAAYAASRGKLDSGRNIVAGMMGLNSPDVLLVGGAFGILGYLIQWGLAQVP CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCC NFGAGIPWTDTVALTVVISAIIARLLFGKTGLFGKAEPGRAFYAPSDKAKWLSFQSEPLQ CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHEECCCCCEE LTVIGLGVGLMAGYLGATYGAPGVFLSFGIAAASLIFLQFGVLVPVSHHIALPAAIVAAS EEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC SGSIVWAGIAGILCAFVGEFYARTFLSHGDTHIDPPACTIATMTLIFNFLTSVGFWTIAH CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC IPF CCC >Mature Secondary Structure TVIGLLAAFGGGIFGAAIGALPAFEFVGFLVMIGVAVQIGVSPAETNFFGIPFGMFGPH HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHCCCC VGGFASGVAAAAYAASRGKLDSGRNIVAGMMGLNSPDVLLVGGAFGILGYLIQWGLAQVP CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCC NFGAGIPWTDTVALTVVISAIIARLLFGKTGLFGKAEPGRAFYAPSDKAKWLSFQSEPLQ CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHEECCCCCEE LTVIGLGVGLMAGYLGATYGAPGVFLSFGIAAASLIFLQFGVLVPVSHHIALPAAIVAAS EEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC SGSIVWAGIAGILCAFVGEFYARTFLSHGDTHIDPPACTIATMTLIFNFLTSVGFWTIAH CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC IPF CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA