| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592245
Identifier: 83592245
GI number: 83592245
Start: 1084367
End: 1085095
Strand: Direct
Name: 83592245
Synonym: Rru_A0909
Alternate gene names: NA
Gene position: 1084367-1085095 (Clockwise)
Preceding gene: 83592244
Following gene: 83592246
Centisome position: 24.91
GC content: 65.57
Gene sequence:
>729_bases ATGGAACTGAAACACGACACCATCGAGCGGATCATCCGCGAGGCGCTCGCCCAGATGAGCGCGCAAGGGATCGCCGGCGC GGGTTTGTCGGTCGAGGCTCCCGCCTCGAATATGTCAGTCGAGGCTCCCGCCTCTGGCAAGCCCCCCCAACGCGATCCGT TTCTGGTTTCGATCGGCGTTTCCAACCGGCACATCCACCTGTCGCGCACGGATATGGACGCGCTGTTTGGGCCGGGATCG CAGTTGACCCGCAAAAAGGCCATGAAGCAGCCCGGGCAGTTCGCCGCCGAAGAGACGGTGACACTCAAGGGGCGCAAGGG CAGCCTGACCAAGGTTCGCGTGCTTGGGCCGCTGCGCAAGGAAACCCAGATCGAGGTTTCCGTCGCCGATGGCTTCACGC TGGGCATCACCCCGCCGCTGCGCATGTCGGGCCACCTTGATGACACGCCGGGCGTGGAGATCATCGGGCCCCAGGGCAGC GTCACGCGCGATCGCGGCGTGATCGTCGCCCTGCGCCACATCCACATGCCCCCGGAAACCGCCGCGTCGCTTGGTCTTCG CAACGGCGAGGAAGTCGACGTCGAAGTTGGCGGCGAGCGGGGCGGCGTGCTGCGCAAGGTGGTGGTCCGCGCCGCCGAGG CCTCGGCCTATGAGATGCATATCGACGTCGAAGAGGCGAACGCGCTGTGCCTCAAGAACGACGATCTGGTCCGCATCCGC AAGATTTGA
Upstream 100 bases:
>100_bases TCGGCTAAGGCGTTTGAATCGGGCGGCCCGACAAACCGGGCGGGCCGTCTGATTTTCCTTGGGTTTCTGACGTATTTCGG AAGTGTTGACGGCGGTAATC
Downstream 100 bases:
>100_bases GCCGAAGGGCCCGCGCGGCCTTGCGAACGGGGTGAACGCCATGAACCACACGAGTGCCGATACGACGCTACGGGCCTTCG CCCAGCTGATCGCCGAGGGG
Product: propanediol utilization protein
Products: NA
Alternate protein names: Propanediol Utilization Protein PduL; Acetate Kinase; Ethanolamine Utilization Protein; PduL Protein; Transcriptional Regulator; Propanediol Utilization Protein Family; Propanediol/Ethanolamine Utilization Protein; Propanediol Utilization; Propanediol Utilization Protein-Like
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MELKHDTIERIIREALAQMSAQGIAGAGLSVEAPASNMSVEAPASGKPPQRDPFLVSIGVSNRHIHLSRTDMDALFGPGS QLTRKKAMKQPGQFAAEETVTLKGRKGSLTKVRVLGPLRKETQIEVSVADGFTLGITPPLRMSGHLDDTPGVEIIGPQGS VTRDRGVIVALRHIHMPPETAASLGLRNGEEVDVEVGGERGGVLRKVVVRAAEASAYEMHIDVEEANALCLKNDDLVRIR KI
Sequences:
>Translated_242_residues MELKHDTIERIIREALAQMSAQGIAGAGLSVEAPASNMSVEAPASGKPPQRDPFLVSIGVSNRHIHLSRTDMDALFGPGS QLTRKKAMKQPGQFAAEETVTLKGRKGSLTKVRVLGPLRKETQIEVSVADGFTLGITPPLRMSGHLDDTPGVEIIGPQGS VTRDRGVIVALRHIHMPPETAASLGLRNGEEVDVEVGGERGGVLRKVVVRAAEASAYEMHIDVEEANALCLKNDDLVRIR KI >Mature_242_residues MELKHDTIERIIREALAQMSAQGIAGAGLSVEAPASNMSVEAPASGKPPQRDPFLVSIGVSNRHIHLSRTDMDALFGPGS QLTRKKAMKQPGQFAAEETVTLKGRKGSLTKVRVLGPLRKETQIEVSVADGFTLGITPPLRMSGHLDDTPGVEIIGPQGS VTRDRGVIVALRHIHMPPETAASLGLRNGEEVDVEVGGERGGVLRKVVVRAAEASAYEMHIDVEEANALCLKNDDLVRIR KI
Specific function: Unknown
COG id: COG4869
COG function: function code Q; Propanediol utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25956; Mature: 25956
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKHDTIERIIREALAQMSAQGIAGAGLSVEAPASNMSVEAPASGKPPQRDPFLVSIGV CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCEEEEEEC SNRHIHLSRTDMDALFGPGSQLTRKKAMKQPGQFAAEETVTLKGRKGSLTKVRVLGPLRK CCCEEEEECCCCHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCCC ETQIEVSVADGFTLGITPPLRMSGHLDDTPGVEIIGPQGSVTRDRGVIVALRHIHMPPET CCEEEEEEECCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHH AASLGLRNGEEVDVEVGGERGGVLRKVVVRAAEASAYEMHIDVEEANALCLKNDDLVRIR HHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEHHHCCEEEECCCCEEEEE KI CC >Mature Secondary Structure MELKHDTIERIIREALAQMSAQGIAGAGLSVEAPASNMSVEAPASGKPPQRDPFLVSIGV CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCEEEEEEC SNRHIHLSRTDMDALFGPGSQLTRKKAMKQPGQFAAEETVTLKGRKGSLTKVRVLGPLRK CCCEEEEECCCCHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCCC ETQIEVSVADGFTLGITPPLRMSGHLDDTPGVEIIGPQGSVTRDRGVIVALRHIHMPPET CCEEEEEEECCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHH AASLGLRNGEEVDVEVGGERGGVLRKVVVRAAEASAYEMHIDVEEANALCLKNDDLVRIR HHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEHHHCCEEEECCCCEEEEE KI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA