| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592209
Identifier: 83592209
GI number: 83592209
Start: 1043594
End: 1045147
Strand: Reverse
Name: 83592209
Synonym: Rru_A0873
Alternate gene names: NA
Gene position: 1045147-1043594 (Counterclockwise)
Preceding gene: 83592210
Following gene: 83592208
Centisome position: 24.01
GC content: 57.66
Gene sequence:
>1554_bases ATGAGCCTGCGTTGGGAGGGTCGTTCCCTCGTGTGTTCCGTTTTGGCCGGAGCCCTGGTTCTGGCGGGCTGTCAAACCAT GTCGAACCCACAAACCGCCTCCGTCGTCGCCCAGCCCGACACCCCCGTCGTCAAAAACATGACGAGCTTTACCAACGCGT TGCGGTGCATGGACGATCTGTTTCTCGCCTACGGCAAGCGCGACATCATCATCACCTCCGATGGCCTCCCCGATCAAACC GGGGAGGTTAGGGCGGGAACCAAGGAGATGATGATCAGCGCCTTGTCCAAGATGACGGCCAAAAGCAATGCCTTTCGCTT TGTCGATGTGGAAAGAAGCGGCGACGCCGTTTTCTATTTCAATCAAATCCTCACCAATCATGATACACAGCGGAAATCTT TTCCAAGCTATTACATTCGCGGAGCCTTTACACAGGTCGATCGCGGAATACTCCAAGACAACCAGGGCATCGGCGTCGCC TTTGATTTCGTCTCGTTGGGATACGAACAAGATCAATTGGTTTCCCTGATCTCCATGGACCTCAACATGGGGAAAACCAC CGACCTGGAAATCCTTCCGGGGATCTCGTCGACCAACACCATCGCCACGGTGAAAAGCGGACGGGGCGCGGAAGTGGAAG GCTTGGTGCCCAAGGCGAACATCTACCTGAACTTCAGCAATGATCGGGCGCAAGGAACCCACGCGGCGGCGCGAACCCTG GTGGAACTGGGGCTGATCGAACTCCTGGGCAAGTTCACCCGGGTTCCCTATTGGCGCTGCCTGGAGATCGAGTCCACCAA TCCGGAAATGATGGCGCAGATTCGCGACTGGTATGACCAGATGAGCCCGGCCGATCGCGTCCGCCTAACGGCATCGGCTT TGCGCGGCATCGGTTATTACCAGGGCGCCGACACCACCGAAACGAACCGCGCGCTGGTGGACGCCATCAACCGCTATAAG GCGGAAAAGGACTTGATCGCCAACGGCCGCATCGATTTCGATCTCTATTACCGCTTCATCGCCGACGATATGGCCCGGCG CGGCCCCAGCGGTGGACAACCCCTTCAAGCCCCCCCCGTCTCGCCCAGCCTCATGGCCTCGGACAGCGAAACGGCCGGAT ATGATCCCCTCGGCTTGACCCTTACCCCTGTCACCCCCTCCCGGGGAAGCTTCCGGGCGGGGGACTCTCTGGCCATCGAC GTCAGCGTCTCCCAGACCGCCAATCTTTATTGTTACTACCAGGCCAGCGATGGAACGATCGCCCGCGTCTTCCCCAATCG CTTTGACTCGAACCCCACCATCAAGCCCGGACTTCCTCAGCGCATCCCGACGAAGGGCCGCTTCTCTATTGTGCTCGACA AGACGGGAACGGAAGAAAACGTCGCCTGCGTCGCCACGCAGTCGCCTTATCAAAACAAAAAGATCCCCTCCGTCCTGCTT CAGCCCGATCTACAGCCCCTTAAAGAGAGTTCCCTTGGTGATATTATTTATCAACACCAAGGACTCGACAAAATGAAGAC CAGTATTCAAACCGTGACGATCGCCGTTCAGTAA
Upstream 100 bases:
>100_bases CCTCTTTACGCGAAACCAACGAGACCGTCATCCGCGGCGACGTGATCTATCGCTGCAAATAAACAGGCGCGTTTTGATGA CCAAGTCAGGGGGAAATGTG
Downstream 100 bases:
>100_bases CCCCATTCCGGAGGCGAAAATGTCCCGGCTCGTCGCTTTCTCGACCATAGCGTTTCTCCTCCTGGGGGGAGACCTGGTCG AGGGCCAGGAAAGCCAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MSLRWEGRSLVCSVLAGALVLAGCQTMSNPQTASVVAQPDTPVVKNMTSFTNALRCMDDLFLAYGKRDIIITSDGLPDQT GEVRAGTKEMMISALSKMTAKSNAFRFVDVERSGDAVFYFNQILTNHDTQRKSFPSYYIRGAFTQVDRGILQDNQGIGVA FDFVSLGYEQDQLVSLISMDLNMGKTTDLEILPGISSTNTIATVKSGRGAEVEGLVPKANIYLNFSNDRAQGTHAAARTL VELGLIELLGKFTRVPYWRCLEIESTNPEMMAQIRDWYDQMSPADRVRLTASALRGIGYYQGADTTETNRALVDAINRYK AEKDLIANGRIDFDLYYRFIADDMARRGPSGGQPLQAPPVSPSLMASDSETAGYDPLGLTLTPVTPSRGSFRAGDSLAID VSVSQTANLYCYYQASDGTIARVFPNRFDSNPTIKPGLPQRIPTKGRFSIVLDKTGTEENVACVATQSPYQNKKIPSVLL QPDLQPLKESSLGDIIYQHQGLDKMKTSIQTVTIAVQ
Sequences:
>Translated_517_residues MSLRWEGRSLVCSVLAGALVLAGCQTMSNPQTASVVAQPDTPVVKNMTSFTNALRCMDDLFLAYGKRDIIITSDGLPDQT GEVRAGTKEMMISALSKMTAKSNAFRFVDVERSGDAVFYFNQILTNHDTQRKSFPSYYIRGAFTQVDRGILQDNQGIGVA FDFVSLGYEQDQLVSLISMDLNMGKTTDLEILPGISSTNTIATVKSGRGAEVEGLVPKANIYLNFSNDRAQGTHAAARTL VELGLIELLGKFTRVPYWRCLEIESTNPEMMAQIRDWYDQMSPADRVRLTASALRGIGYYQGADTTETNRALVDAINRYK AEKDLIANGRIDFDLYYRFIADDMARRGPSGGQPLQAPPVSPSLMASDSETAGYDPLGLTLTPVTPSRGSFRAGDSLAID VSVSQTANLYCYYQASDGTIARVFPNRFDSNPTIKPGLPQRIPTKGRFSIVLDKTGTEENVACVATQSPYQNKKIPSVLL QPDLQPLKESSLGDIIYQHQGLDKMKTSIQTVTIAVQ >Mature_516_residues SLRWEGRSLVCSVLAGALVLAGCQTMSNPQTASVVAQPDTPVVKNMTSFTNALRCMDDLFLAYGKRDIIITSDGLPDQTG EVRAGTKEMMISALSKMTAKSNAFRFVDVERSGDAVFYFNQILTNHDTQRKSFPSYYIRGAFTQVDRGILQDNQGIGVAF DFVSLGYEQDQLVSLISMDLNMGKTTDLEILPGISSTNTIATVKSGRGAEVEGLVPKANIYLNFSNDRAQGTHAAARTLV ELGLIELLGKFTRVPYWRCLEIESTNPEMMAQIRDWYDQMSPADRVRLTASALRGIGYYQGADTTETNRALVDAINRYKA EKDLIANGRIDFDLYYRFIADDMARRGPSGGQPLQAPPVSPSLMASDSETAGYDPLGLTLTPVTPSRGSFRAGDSLAIDV SVSQTANLYCYYQASDGTIARVFPNRFDSNPTIKPGLPQRIPTKGRFSIVLDKTGTEENVACVATQSPYQNKKIPSVLLQ PDLQPLKESSLGDIIYQHQGLDKMKTSIQTVTIAVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56655; Mature: 56524
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRWEGRSLVCSVLAGALVLAGCQTMSNPQTASVVAQPDTPVVKNMTSFTNALRCMDDL CCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH FLAYGKRDIIITSDGLPDQTGEVRAGTKEMMISALSKMTAKSNAFRFVDVERSGDAVFYF HHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEE NQILTNHDTQRKSFPSYYIRGAFTQVDRGILQDNQGIGVAFDFVSLGYEQDQLVSLISMD EHHHHCCCCHHHCCCCHHEEHHHHHHHHHHHCCCCCCEEEEEHHHCCCCHHHHHHHHHHH LNMGKTTDLEILPGISSTNTIATVKSGRGAEVEGLVPKANIYLNFSNDRAQGTHAAARTL CCCCCCCCEEEECCCCCCCEEEEEECCCCCEEECCCCEEEEEEEECCCCCCCHHHHHHHH VELGLIELLGKFTRVPYWRCLEIESTNPEMMAQIRDWYDQMSPADRVRLTASALRGIGYY HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEE QGADTTETNRALVDAINRYKAEKDLIANGRIDFDLYYRFIADDMARRGPSGGQPLQAPPV CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC SPSLMASDSETAGYDPLGLTLTPVTPSRGSFRAGDSLAIDVSVSQTANLYCYYQASDGTI CCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEE ARVFPNRFDSNPTIKPGLPQRIPTKGRFSIVLDKTGTEENVACVATQSPYQNKKIPSVLL EEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEE QPDLQPLKESSLGDIIYQHQGLDKMKTSIQTVTIAVQ CCCCHHHHHCCHHHHHHHHCCHHHHHCCEEEEEEEEC >Mature Secondary Structure SLRWEGRSLVCSVLAGALVLAGCQTMSNPQTASVVAQPDTPVVKNMTSFTNALRCMDDL CCEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH FLAYGKRDIIITSDGLPDQTGEVRAGTKEMMISALSKMTAKSNAFRFVDVERSGDAVFYF HHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEE NQILTNHDTQRKSFPSYYIRGAFTQVDRGILQDNQGIGVAFDFVSLGYEQDQLVSLISMD EHHHHCCCCHHHCCCCHHEEHHHHHHHHHHHCCCCCCEEEEEHHHCCCCHHHHHHHHHHH LNMGKTTDLEILPGISSTNTIATVKSGRGAEVEGLVPKANIYLNFSNDRAQGTHAAARTL CCCCCCCCEEEECCCCCCCEEEEEECCCCCEEECCCCEEEEEEEECCCCCCCHHHHHHHH VELGLIELLGKFTRVPYWRCLEIESTNPEMMAQIRDWYDQMSPADRVRLTASALRGIGYY HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEE QGADTTETNRALVDAINRYKAEKDLIANGRIDFDLYYRFIADDMARRGPSGGQPLQAPPV CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC SPSLMASDSETAGYDPLGLTLTPVTPSRGSFRAGDSLAIDVSVSQTANLYCYYQASDGTI CCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEE ARVFPNRFDSNPTIKPGLPQRIPTKGRFSIVLDKTGTEENVACVATQSPYQNKKIPSVLL EEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEE QPDLQPLKESSLGDIIYQHQGLDKMKTSIQTVTIAVQ CCCCHHHHHCCHHHHHHHHCCHHHHHCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA