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The map label for this gene is 83592145

Identifier: 83592145

GI number: 83592145

Start: 961366

End: 961635

Strand: Reverse

Name: 83592145

Synonym: Rru_A0806

Alternate gene names: NA

Gene position: 961635-961366 (Counterclockwise)

Preceding gene: 83592146

Following gene: 83592144

Centisome position: 22.09

GC content: 68.52

Gene sequence:

>270_bases
ATGGCGGGCACCGACCCCATCGACGGCTTCAGCGTTCCGGTCCACCGGGCGCTGACCGAGCCGATCTTGTTGGGCGGGGC
GCCACGCACCCTGGCCATCGCCAACGCCACCCTGGCCGCCGCCATCGCGCTGGGTCTGCGGCTATGGATTCCCGGATTGG
TTCTTTGGCTGCTCGGCCATGGCGCCGCCGTCTGGGCCGCCAAGCACGACGCCCAGTTCGTCGAGGTGATCCGCAGGCAT
CTCCGTTACCCCGCCTATTTGCGAGCGTAA

Upstream 100 bases:

>100_bases
TCCGCCGGCTGATACAGATCGTCTTCGGCCTGTCGATCGCCTTCGCCGCCAGCTCGTTTTTCCTGTCGTTCTTCTCGTTT
TCCGGCGGAGCGCTGGTGTG

Downstream 100 bases:

>100_bases
CCGATGCTAAACCTCGCCGAATACCGCGGCCATCCGGCTGGCCTCGCCGATTTCCTGCCCTGGGCGGCCTTGGTGGCGCC
GGGTGTCGTCCTCAACAAGG

Product: conjugal transfer protein

Products: NA

Alternate protein names: Conjugal Transfer Protein TrbD; Conjugal Transfer Protein; Conjugal Transfer TrbD Transmembrane Protein; Conjugal Transfer Trbd Transmembrane Protein; Type IV Secretory Pathway TrbD Component; Type IV Secretory Pathway VirB3 Family Protein; Type Iv Secretory Pathway Virb3 Family Protein; Conjugal Transfer Protein Trbd; Type IV Secretory Pathway TrbD Component-Like Protein; Conjugative Transfer Protein TrbD; P-Type Conjugative Transfer Protein TrbD

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MAGTDPIDGFSVPVHRALTEPILLGGAPRTLAIANATLAAAIALGLRLWIPGLVLWLLGHGAAVWAAKHDAQFVEVIRRH
LRYPAYLRA

Sequences:

>Translated_89_residues
MAGTDPIDGFSVPVHRALTEPILLGGAPRTLAIANATLAAAIALGLRLWIPGLVLWLLGHGAAVWAAKHDAQFVEVIRRH
LRYPAYLRA
>Mature_88_residues
AGTDPIDGFSVPVHRALTEPILLGGAPRTLAIANATLAAAIALGLRLWIPGLVLWLLGHGAAVWAAKHDAQFVEVIRRHL
RYPAYLRA

Specific function: Unknown

COG id: COG5268

COG function: function code NU; Type IV secretory pathway, TrbD component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9541; Mature: 9410

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTDPIDGFSVPVHRALTEPILLGGAPRTLAIANATLAAAIALGLRLWIPGLVLWLLGH
CCCCCCCCCCCCCHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAAVWAAKHDAQFVEVIRRHLRYPAYLRA
CHHEECCCCCHHHHHHHHHHCCCCCHHCC
>Mature Secondary Structure 
AGTDPIDGFSVPVHRALTEPILLGGAPRTLAIANATLAAAIALGLRLWIPGLVLWLLGH
CCCCCCCCCCCCHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAAVWAAKHDAQFVEVIRRHLRYPAYLRA
CHHEECCCCCHHHHHHHHHHCCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA