| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is albA [H]
Identifier: 83592102
GI number: 83592102
Start: 896962
End: 898026
Strand: Direct
Name: albA [H]
Synonym: Rru_A0763
Alternate gene names: 83592102
Gene position: 896962-898026 (Clockwise)
Preceding gene: 83592101
Following gene: 83592103
Centisome position: 20.61
GC content: 67.32
Gene sequence:
>1065_bases ATGATCCTTTCCCCTGCGCCCTCCGATCCCCTTTTGCCACCGCTTCAGCTGTTTTTGGAACTGACGACGCGCTGCAATCT GCGCTGCCGTCACTGCTATATCCGGGCCGGCGAAGGCGAGGCCCGCGACCTGCCGGCAAGCGATGTCCAGGGATTGCTTG GCGAGTTTCAGGCGATGGGCGGCGAATTCGTGTCGTTCAGCGGTGGCGAGCCGACGCTCTATGGCGAGTGGCGGCCGGTG ATGCGCTATGCCCGCTATCTTGGCCTGGAAGCGATGCTGGTGACCAACGGCGTCGCCTTGAGCGAGGGCGACATCGGCTT TCTTGACGAGATCGGCGCCAGCATCGCCGTCAGCCTGGATGGCGCCAGCGCCGCCGTTCACGACGCCATCCGTGGGCGCG GCAGTTTTGAGCGCACCGGCCGGACGCTTGAGCGCCTCGGCGCCGCCGGCCTTGGCGGGCGGGTGACGCTGTGCTTTACG CCCTCGGCGGCCAATTGCGCCGATCTGCCCGGCGTCGTCCGGCTGGCCGCCGATCTTGGTCTCGGCACCGTTTATGTCTC GCTGCTTGAACAACGTGGGCGGGCTGGCGATGTCATCGATCAACTGTCGCTGGGGCCGGCCGAACGCCGCGCCCTGATCT TCGCCATGGCGTCGTTGCAGGAGCGCTACCCCGAGATCGCCCTGGAATGCCTGAACTTGCGCTATTTCACCGAACGCCTG CGCGGGTATGCCATCAGCGGCGATAGCCTGGACCGCACGCTGCGGGTCACCGCCGAGGGTGCCCTGGTGCTGACCGCCTA TCTGGACGACGCCCCCTTTCAGCTTGGTCCCTATGCGCCCGGGACGCTTGATCGGCTGTGGTGGGGCGACAAGGTGCGCG CGGCCTTTGCGGCGGCCGACCAAAGGGCCCAAACCGTGGCCGAGTGCCAGGAGTGTATCGCTTGGCCGTGGTGCCAGGGC GGCAGCGCCGCCTTCGCCTGGACCGCCCACGGCCGTTTTGACGCGGTGGACGGCTTTTGCGCGGCCAAGCGCGATGTTCT GCGGGAAATGGCGGGGGGCTGGTGA
Upstream 100 bases:
>100_bases TGAGACTGCCGCCGCCGCCAAAATCCAGGTCCGACGACGACACGGCGCTGTTTAGCGTTCCCGATCGCAAAAGGACCTTG CCGGTGCTGCAGGTGGCGCG
Downstream 100 bases:
>100_bases TGAGCACGACGGCAACAACCATTCGTATAACCGAACGCGCCGCCCGCAAGGTCGATGAATTCCATCTGCGCGGCGACCTC GACCCGACGCTGGCCATCCG
Product: radical SAM family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MILSPAPSDPLLPPLQLFLELTTRCNLRCRHCYIRAGEGEARDLPASDVQGLLGEFQAMGGEFVSFSGGEPTLYGEWRPV MRYARYLGLEAMLVTNGVALSEGDIGFLDEIGASIAVSLDGASAAVHDAIRGRGSFERTGRTLERLGAAGLGGRVTLCFT PSAANCADLPGVVRLAADLGLGTVYVSLLEQRGRAGDVIDQLSLGPAERRALIFAMASLQERYPEIALECLNLRYFTERL RGYAISGDSLDRTLRVTAEGALVLTAYLDDAPFQLGPYAPGTLDRLWWGDKVRAAFAAADQRAQTVAECQECIAWPWCQG GSAAFAWTAHGRFDAVDGFCAAKRDVLREMAGGW
Sequences:
>Translated_354_residues MILSPAPSDPLLPPLQLFLELTTRCNLRCRHCYIRAGEGEARDLPASDVQGLLGEFQAMGGEFVSFSGGEPTLYGEWRPV MRYARYLGLEAMLVTNGVALSEGDIGFLDEIGASIAVSLDGASAAVHDAIRGRGSFERTGRTLERLGAAGLGGRVTLCFT PSAANCADLPGVVRLAADLGLGTVYVSLLEQRGRAGDVIDQLSLGPAERRALIFAMASLQERYPEIALECLNLRYFTERL RGYAISGDSLDRTLRVTAEGALVLTAYLDDAPFQLGPYAPGTLDRLWWGDKVRAAFAAADQRAQTVAECQECIAWPWCQG GSAAFAWTAHGRFDAVDGFCAAKRDVLREMAGGW >Mature_354_residues MILSPAPSDPLLPPLQLFLELTTRCNLRCRHCYIRAGEGEARDLPASDVQGLLGEFQAMGGEFVSFSGGEPTLYGEWRPV MRYARYLGLEAMLVTNGVALSEGDIGFLDEIGASIAVSLDGASAAVHDAIRGRGSFERTGRTLERLGAAGLGGRVTLCFT PSAANCADLPGVVRLAADLGLGTVYVSLLEQRGRAGDVIDQLSLGPAERRALIFAMASLQERYPEIALECLNLRYFTERL RGYAISGDSLDRTLRVTAEGALVLTAYLDDAPFQLGPYAPGTLDRLWWGDKVRAAFAAADQRAQTVAECQECIAWPWCQG GSAAFAWTAHGRFDAVDGFCAAKRDVLREMAGGW
Specific function: Required for production of the bacteriocin subtilosin. May activate a metalloenzyme that catalyzes a modification of prosubtilosin [H]
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR008792 - InterPro: IPR007197 [H]
Pfam domain/function: PF05402 PqqD; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 38103; Mature: 38103
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILSPAPSDPLLPPLQLFLELTTRCNLRCRHCYIRAGEGEARDLPASDVQGLLGEFQAMG CCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC GEFVSFSGGEPTLYGEWRPVMRYARYLGLEAMLVTNGVALSEGDIGFLDEIGASIAVSLD CCEEEECCCCCEEECCCHHHHHHHHHHCCEEEEEECCEEECCCCCCHHHHCCCEEEEEEC GASAAVHDAIRGRGSFERTGRTLERLGAAGLGGRVTLCFTPSAANCADLPGVVRLAADLG CCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCC LGTVYVSLLEQRGRAGDVIDQLSLGPAERRALIFAMASLQERYPEIALECLNLRYFTERL HHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGYAISGDSLDRTLRVTAEGALVLTAYLDDAPFQLGPYAPGTLDRLWWGDKVRAAFAAAD CCEEECCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH QRAQTVAECQECIAWPWCQGGSAAFAWTAHGRFDAVDGFCAAKRDVLREMAGGW HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILSPAPSDPLLPPLQLFLELTTRCNLRCRHCYIRAGEGEARDLPASDVQGLLGEFQAMG CCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC GEFVSFSGGEPTLYGEWRPVMRYARYLGLEAMLVTNGVALSEGDIGFLDEIGASIAVSLD CCEEEECCCCCEEECCCHHHHHHHHHHCCEEEEEECCEEECCCCCCHHHHCCCEEEEEEC GASAAVHDAIRGRGSFERTGRTLERLGAAGLGGRVTLCFTPSAANCADLPGVVRLAADLG CCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCC LGTVYVSLLEQRGRAGDVIDQLSLGPAERRALIFAMASLQERYPEIALECLNLRYFTERL HHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGYAISGDSLDRTLRVTAEGALVLTAYLDDAPFQLGPYAPGTLDRLWWGDKVRAAFAAAD CCEEECCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH QRAQTVAECQECIAWPWCQGGSAAFAWTAHGRFDAVDGFCAAKRDVLREMAGGW HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 10572140; 10809709; 10809710 [H]