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The map label for this gene is ytfL [C]

Identifier: 83592095

GI number: 83592095

Start: 888280

End: 889590

Strand: Direct

Name: ytfL [C]

Synonym: Rru_A0756

Alternate gene names: 83592095

Gene position: 888280-889590 (Clockwise)

Preceding gene: 83592094

Following gene: 83592096

Centisome position: 20.41

GC content: 65.6

Gene sequence:

>1311_bases
ATGATTGCCGTGGAAATCGCCGTGATCGTTCTGCTGATGCTGCTGAACGGTCTTTTCGCGATGTCGGAACTGGCGATGGT
GTCGTCGCGCCGCGCCCGCCTGCAGGCGATGGCCGACCGCCATGTGCCCGGCGCCCGCATCGCCTTGCGGCTGACCGAGG
ATCCGGGGCGCTTCCTGTCGACCGTGCAGATCGGCATCACCCTGGTCGGCGTCGTCGCCGGCGCCTATGGCGGGGCGACG
CTGGGCGATCGCGCCGGGGAATGCCTGGAGACGATCCCGGCCTTGGCCGGCTGGGGGCGGTTTCTTGGGGTCGGCGGGGT
GCTGCTGCTGATCACCTTTTTGTCGATCGTTCTGGGCGAGTTGATTCCCAAACGCATCGCCCTGACCAACCCCGAACGCA
CCGCCTGCGTCGTCGCCGGGCTGATGCGCGCCCTGTCGCGGATCGCCGCCCCCTTCGTCTGGCTGCTCGCCGCCTCGACC
GAGATGGCGCTGCGCCTGCTCGGCATCCATGGCTCCGAGGGCACGACGGTGACCGAGGAGGAGGTGCGGGCCTTGATTTC
CGAAGGAACCGAGGCCGGGGTCTTCGCCCCCGAGGAACAGGAGATGATCCGCGGCGTGCTGCGGCTGGGCGATCGCACCG
TGCGCGCGGTGATGACGCCGCGCCCCGAGGTGGTCTGGCTTGACCTTGAGGAGCCGACCCAGGCGCTTTTGCTCCAGATC
GGTTCGGGCAGCCATTCGTCCTATCCGGTCTGCCGGGGCCAGCTTGATGAGATCGTCGGCATCGTCCACACCCGCGATTT
GCTGGCCGCCGCCGTGCGCGGCAAGCCGCTGAACCTGGAAGCCGCCATGGTGCGGCCTTTGGTTGTTCACGACGGCATGG
CGATCTTGCGTTTGCTCGATCTGATGAAGGCGAACCGCAGTTATCTGGCGGTGGTGGTCGATGAATACGGTAGCGTAGAA
GGCGTGGTGACCCTGACCGATATCCTTGAAAGCATCGCCGGCGATCTGCCCGATGCCGATGAGGATAGCGAGGTCGCCGC
CGTGCCGCGGGCCGATGGGTCGTGGCTGGTGGAAGGGTGGATGCCGATCGACGAATTCGAAGACACGCTGCACCTGCGTG
ATCTGCGCGATGGCGACGATTTTCAAACCGTCGCCGGTTTGGTGTTGCGCGAATTGGGCCGCATTCCCAGTGCCGGCGAT
GTGTTCGAGCGCGATGGCATCCGCTTCGAGGTGGTCGATATGGATCGTCGCCGCATCGATAAGATCCTGGTCACGCCGCT
ACCTTCAAGCCAAGCCGAGGGGGATATCTGA

Upstream 100 bases:

>100_bases
CCGCGATGTCGACCACAGTATCGAGGCCCTGCGCCAGACCTTGGTCAGGGTGGTTCGGGAAGCGGCCCTCGCCTGATCGG
AGCGCGGGGAAGGGGTTTTG

Downstream 100 bases:

>100_bases
CGCGGCTCCCCTCGCGCTCTCGGCCAAAGCGCGGCGGCGATTCGCCGTTCTTCAGCACGACGGGCTTTGGCGTTTTTTGT
CCGCTTTTCGGCGCGGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MIAVEIAVIVLLMLLNGLFAMSELAMVSSRRARLQAMADRHVPGARIALRLTEDPGRFLSTVQIGITLVGVVAGAYGGAT
LGDRAGECLETIPALAGWGRFLGVGGVLLLITFLSIVLGELIPKRIALTNPERTACVVAGLMRALSRIAAPFVWLLAAST
EMALRLLGIHGSEGTTVTEEEVRALISEGTEAGVFAPEEQEMIRGVLRLGDRTVRAVMTPRPEVVWLDLEEPTQALLLQI
GSGSHSSYPVCRGQLDEIVGIVHTRDLLAAAVRGKPLNLEAAMVRPLVVHDGMAILRLLDLMKANRSYLAVVVDEYGSVE
GVVTLTDILESIAGDLPDADEDSEVAAVPRADGSWLVEGWMPIDEFEDTLHLRDLRDGDDFQTVAGLVLRELGRIPSAGD
VFERDGIRFEVVDMDRRRIDKILVTPLPSSQAEGDI

Sequences:

>Translated_436_residues
MIAVEIAVIVLLMLLNGLFAMSELAMVSSRRARLQAMADRHVPGARIALRLTEDPGRFLSTVQIGITLVGVVAGAYGGAT
LGDRAGECLETIPALAGWGRFLGVGGVLLLITFLSIVLGELIPKRIALTNPERTACVVAGLMRALSRIAAPFVWLLAAST
EMALRLLGIHGSEGTTVTEEEVRALISEGTEAGVFAPEEQEMIRGVLRLGDRTVRAVMTPRPEVVWLDLEEPTQALLLQI
GSGSHSSYPVCRGQLDEIVGIVHTRDLLAAAVRGKPLNLEAAMVRPLVVHDGMAILRLLDLMKANRSYLAVVVDEYGSVE
GVVTLTDILESIAGDLPDADEDSEVAAVPRADGSWLVEGWMPIDEFEDTLHLRDLRDGDDFQTVAGLVLRELGRIPSAGD
VFERDGIRFEVVDMDRRRIDKILVTPLPSSQAEGDI
>Mature_436_residues
MIAVEIAVIVLLMLLNGLFAMSELAMVSSRRARLQAMADRHVPGARIALRLTEDPGRFLSTVQIGITLVGVVAGAYGGAT
LGDRAGECLETIPALAGWGRFLGVGGVLLLITFLSIVLGELIPKRIALTNPERTACVVAGLMRALSRIAAPFVWLLAAST
EMALRLLGIHGSEGTTVTEEEVRALISEGTEAGVFAPEEQEMIRGVLRLGDRTVRAVMTPRPEVVWLDLEEPTQALLLQI
GSGSHSSYPVCRGQLDEIVGIVHTRDLLAAAVRGKPLNLEAAMVRPLVVHDGMAILRLLDLMKANRSYLAVVVDEYGSVE
GVVTLTDILESIAGDLPDADEDSEVAAVPRADGSWLVEGWMPIDEFEDTLHLRDLRDGDDFQTVAGLVLRELGRIPSAGD
VFERDGIRFEVVDMDRRRIDKILVTPLPSSQAEGDI

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=375, Percent_Identity=24.8, Blast_Score=154, Evalue=2e-37,
Organism=Escherichia coli, GI1790664, Length=427, Percent_Identity=31.1475409836066, Blast_Score=233, Evalue=1e-62,
Organism=Escherichia coli, GI1788119, Length=228, Percent_Identity=39.0350877192982, Blast_Score=158, Evalue=7e-40,
Organism=Escherichia coli, GI87082033, Length=272, Percent_Identity=33.0882352941176, Blast_Score=158, Evalue=7e-40,
Organism=Escherichia coli, GI145693175, Length=423, Percent_Identity=29.3144208037825, Blast_Score=154, Evalue=7e-39,
Organism=Escherichia coli, GI1786879, Length=268, Percent_Identity=27.9850746268657, Blast_Score=109, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47014; Mature: 47014

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVEIAVIVLLMLLNGLFAMSELAMVSSRRARLQAMADRHVPGARIALRLTEDPGRFLS
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHH
TVQIGITLVGVVAGAYGGATLGDRAGECLETIPALAGWGRFLGVGGVLLLITFLSIVLGE
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPKRIALTNPERTACVVAGLMRALSRIAAPFVWLLAASTEMALRLLGIHGSEGTTVTEE
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECHH
EVRALISEGTEAGVFAPEEQEMIRGVLRLGDRTVRAVMTPRPEVVWLDLEEPTQALLLQI
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHEEEECCCCCEEEEECCCCHHHHHEEE
GSGSHSSYPVCRGQLDEIVGIVHTRDLLAAAVRGKPLNLEAAMVRPLVVHDGMAILRLLD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHH
LMKANRSYLAVVVDEYGSVEGVVTLTDILESIAGDLPDADEDSEVAAVPRADGSWLVEGW
HHHCCCCEEEEEEECCCCCCCEEEHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEECC
MPIDEFEDTLHLRDLRDGDDFQTVAGLVLRELGRIPSAGDVFERDGIRFEVVDMDRRRID
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEEEECCCHHHHH
KILVTPLPSSQAEGDI
HEEECCCCCCCCCCCC
>Mature Secondary Structure
MIAVEIAVIVLLMLLNGLFAMSELAMVSSRRARLQAMADRHVPGARIALRLTEDPGRFLS
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHH
TVQIGITLVGVVAGAYGGATLGDRAGECLETIPALAGWGRFLGVGGVLLLITFLSIVLGE
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPKRIALTNPERTACVVAGLMRALSRIAAPFVWLLAASTEMALRLLGIHGSEGTTVTEE
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECHH
EVRALISEGTEAGVFAPEEQEMIRGVLRLGDRTVRAVMTPRPEVVWLDLEEPTQALLLQI
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHEEEECCCCCEEEEECCCCHHHHHEEE
GSGSHSSYPVCRGQLDEIVGIVHTRDLLAAAVRGKPLNLEAAMVRPLVVHDGMAILRLLD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHH
LMKANRSYLAVVVDEYGSVEGVVTLTDILESIAGDLPDADEDSEVAAVPRADGSWLVEGW
HHHCCCCEEEEEEECCCCCCCEEEHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEECC
MPIDEFEDTLHLRDLRDGDDFQTVAGLVLRELGRIPSAGDVFERDGIRFEVVDMDRRRID
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEEEECCCHHHHH
KILVTPLPSSQAEGDI
HEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]