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The map label for this gene is comF [H]

Identifier: 83592076

GI number: 83592076

Start: 863287

End: 864027

Strand: Direct

Name: comF [H]

Synonym: Rru_A0737

Alternate gene names: 83592076

Gene position: 863287-864027 (Clockwise)

Preceding gene: 83592070

Following gene: 83592077

Centisome position: 19.83

GC content: 72.06

Gene sequence:

>741_bases
ATGGGGGCGTCGTGGCGGGAGATGGGCCGGGGGCTGTTCGATCTTTTGTTGCCGCCGCGCTGCCTGGGCTGCGGCACCCA
GGTCGCCGACCCCGATGCCTTGTGTCCGGCCTGTTTTTCCGGCCTCGCCCATATCACCGAACCCTTCTGCGCCTGCTGTG
GCCTGCCTTTCGAACTGGGGGGCGAGGGGGAGGGCGAGCGGCTGTGCGGGGCTTGTTTGGGAACCCCCCCGCTGTTTTCC
CGGGCAAGGGCGGTCTGGCGCTATGATGACGCCTCGGCCCGGCTGATCCTCGGCTTCAAGCATGCCGATCGCTTGGACTC
GGTGCCGGGATTCGCCCGCTGGATGGCGCGGGCCGGCCGCGCCCTGCTGGCCGGGGATCCCGTGCTGGTGCCCGTTCCGC
TCCATCGCTGGCGGCTGTTTTCGCGGCGCTATAATCAGGCCGCCGTTCTCGCCCAGGCCATCGCCGACGCCGGCGATCTG
GATTATCGTCCGCTGGCCCTGGTGCGCCGGCGGGCGACGCCAAGCCAGGGCGGCCTGGGGCGCGGGGCGCGGGCGCGCAA
TGTCCAGGGCGCCTTCGTCGTCGTCCGCCCCGACGAGATCGCCGGGCGGCGGGTGGTGCTGATCGACGACGTGCTGACCA
CCGGGGCGACGGCCAATGCCTGCGCCCGGGCTCTGCTGGCCGCCGGCGCCACCGGCGTTGACGTGCTGACCCTGGCGCGG
GTGAGCCTGGAGGAGACCTGA

Upstream 100 bases:

>100_bases
GCGGCGATCGAAGACGGTCATGCTCTCGGACATGGAGCCTGATATAGTCGGTTCGCCCGTCGGTCTCCAGGGGGAAGCCG
CGGATAAAGCGGAGGGGGCG

Downstream 100 bases:

>100_bases
GGGGGTGGCGGCCTGGAAGCGTCAAGCCGGCCGCCGTATATAGAAACGACTGTTTTCGGTTTTCGTTCTTTTGCCTGGAG
AGTATCGATGGTTGCCGTTG

Product: phosphoribosyltransferase

Products: NA

Alternate protein names: DNA transformation protein ComF; Protein COM101A [H]

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MGASWREMGRGLFDLLLPPRCLGCGTQVADPDALCPACFSGLAHITEPFCACCGLPFELGGEGEGERLCGACLGTPPLFS
RARAVWRYDDASARLILGFKHADRLDSVPGFARWMARAGRALLAGDPVLVPVPLHRWRLFSRRYNQAAVLAQAIADAGDL
DYRPLALVRRRATPSQGGLGRGARARNVQGAFVVVRPDEIAGRRVVLIDDVLTTGATANACARALLAAGATGVDVLTLAR
VSLEET

Sequences:

>Translated_246_residues
MGASWREMGRGLFDLLLPPRCLGCGTQVADPDALCPACFSGLAHITEPFCACCGLPFELGGEGEGERLCGACLGTPPLFS
RARAVWRYDDASARLILGFKHADRLDSVPGFARWMARAGRALLAGDPVLVPVPLHRWRLFSRRYNQAAVLAQAIADAGDL
DYRPLALVRRRATPSQGGLGRGARARNVQGAFVVVRPDEIAGRRVVLIDDVLTTGATANACARALLAAGATGVDVLTLAR
VSLEET
>Mature_245_residues
GASWREMGRGLFDLLLPPRCLGCGTQVADPDALCPACFSGLAHITEPFCACCGLPFELGGEGEGERLCGACLGTPPLFSR
ARAVWRYDDASARLILGFKHADRLDSVPGFARWMARAGRALLAGDPVLVPVPLHRWRLFSRRYNQAAVLAQAIADAGDLD
YRPLALVRRRATPSQGGLGRGARARNVQGAFVVVRPDEIAGRRVVLIDDVLTTGATANACARALLAAGATGVDVLTLARV
SLEET

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

Organism=Escherichia coli, GI87082263, Length=214, Percent_Identity=31.3084112149533, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 26164; Mature: 26032

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00630 IMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGASWREMGRGLFDLLLPPRCLGCGTQVADPDALCPACFSGLAHITEPFCACCGLPFELG
CCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GEGEGERLCGACLGTPPLFSRARAVWRYDDASARLILGFKHADRLDSVPGFARWMARAGR
CCCCCHHHHHHHCCCCHHHHHHHHHEEECCCCCEEEEEECHHHHHCCCCHHHHHHHHCCC
ALLAGDPVLVPVPLHRWRLFSRRYNQAAVLAQAIADAGDLDYRPLALVRRRATPSQGGLG
EEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCC
RGARARNVQGAFVVVRPDEIAGRRVVLIDDVLTTGATANACARALLAAGATGVDVLTLAR
CCCCCCCCCCEEEEEECHHHCCCEEEEEECHHHCCCCHHHHHHHHHHCCCCCHHHHHHHH
VSLEET
HHHCCC
>Mature Secondary Structure 
GASWREMGRGLFDLLLPPRCLGCGTQVADPDALCPACFSGLAHITEPFCACCGLPFELG
CCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GEGEGERLCGACLGTPPLFSRARAVWRYDDASARLILGFKHADRLDSVPGFARWMARAGR
CCCCCHHHHHHHCCCCHHHHHHHHHEEECCCCCEEEEEECHHHHHCCCCHHHHHHHHCCC
ALLAGDPVLVPVPLHRWRLFSRRYNQAAVLAQAIADAGDLDYRPLALVRRRATPSQGGLG
EEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCC
RGARARNVQGAFVVVRPDEIAGRRVVLIDDVLTTGATANACARALLAAGATGVDVLTLAR
CCCCCCCCCCEEEEEECHHHCCCEEEEEECHHHCCCCHHHHHHHHHHCCCCCHHHHHHHH
VSLEET
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 1856167; 7542800 [H]