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The map label for this gene is chrR [H]

Identifier: 83592060

GI number: 83592060

Start: 849388

End: 850062

Strand: Reverse

Name: chrR [H]

Synonym: Rru_A0721

Alternate gene names: 83592060

Gene position: 850062-849388 (Counterclockwise)

Preceding gene: 83592061

Following gene: 83592059

Centisome position: 19.53

GC content: 70.37

Gene sequence:

>675_bases
ATGACCCTGTCCCACCACCCGAGCGAAAGCCTGCTCGCCGCCTATGCGGCGGGAGTCCTGGGCGAGGGGGCGAGCCTGAT
CGTCGCCGCCCATCTGACCCTCTGCCCGCATTGCCGGGGTGCCGTCGACCATCTGGAGGCCCTGGGCGGGGCGCTTCTCG
AGGAGATGGCCCCCTTGGCTTTGGCCGAGGGCGCCCTCGACGCCGTTCTCGCCCGCCTCGACACCCCGGCCGCCCCGTCC
CCGACCCGCGCCACGGCTTCCCGCCTGCCGCCGCCCATGGGCGAGGCGGCCCTGCTGCCCGCCCCCTTGCGCCGTCACCT
TGCCGATCCTTCGGCCGCCACCTTGCCGTGGAGGGCGATCGCCCCGGGCATCCGGCAGATTGCCCTGTTGCCGCGCACCG
CCGGCGGAGGCAATGCCCATTTGTTAAAGATCGCCCCCAAGACCGCCCTTCCCCGGCACGGTCACCATGGGCAGGAATAC
ACCCTGGTGCTGGCGGGGGCCTTTCAGGATCGCTCGGAGCGCTTCGCCCGGGGGGATGTCGCCGAGGTCGAAGCCGACAG
GGTCCACCAACCGATCACCGACGGCCAGGATTGCCTGTGTCTGGTCGTGACAGAAGGCCCTTTGCGCTACATGGGCATGA
TCCCGCGCCTGATGCAGCCCTTCACCGGTTTCTAA

Upstream 100 bases:

>100_bases
TCGAAGTTGCCGATCGTCTTGGCCTACCCCTTGGAACCGTGAAATCCCGTTTGCGTTTGGCCTTTTCCAAGGTGCGCGGA
TCTGTTGGAGACGAAGTGCG

Downstream 100 bases:

>100_bases
GGATACCTTTAACCGGCTTGCCCCCTTGCTTTCGCGGGCTTTTGACGAAAGAATGCGGGCGTCGTCGTTTCGGCCGAAGT
TAGGGGTAATCTTGACGGAC

Product: anti-Sigm factor, ChrR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTLSHHPSESLLAAYAAGVLGEGASLIVAAHLTLCPHCRGAVDHLEALGGALLEEMAPLALAEGALDAVLARLDTPAAPS
PTRATASRLPPPMGEAALLPAPLRRHLADPSAATLPWRAIAPGIRQIALLPRTAGGGNAHLLKIAPKTALPRHGHHGQEY
TLVLAGAFQDRSERFARGDVAEVEADRVHQPITDGQDCLCLVVTEGPLRYMGMIPRLMQPFTGF

Sequences:

>Translated_224_residues
MTLSHHPSESLLAAYAAGVLGEGASLIVAAHLTLCPHCRGAVDHLEALGGALLEEMAPLALAEGALDAVLARLDTPAAPS
PTRATASRLPPPMGEAALLPAPLRRHLADPSAATLPWRAIAPGIRQIALLPRTAGGGNAHLLKIAPKTALPRHGHHGQEY
TLVLAGAFQDRSERFARGDVAEVEADRVHQPITDGQDCLCLVVTEGPLRYMGMIPRLMQPFTGF
>Mature_223_residues
TLSHHPSESLLAAYAAGVLGEGASLIVAAHLTLCPHCRGAVDHLEALGGALLEEMAPLALAEGALDAVLARLDTPAAPSP
TRATASRLPPPMGEAALLPAPLRRHLADPSAATLPWRAIAPGIRQIALLPRTAGGGNAHLLKIAPKTALPRHGHHGQEYT
LVLAGAFQDRSERFARGDVAEVEADRVHQPITDGQDCLCLVVTEGPLRYMGMIPRLMQPFTGF

Specific function: Anti-sigma factor that inhibits the activity of the extracytoplasmic function (ECF) sigma (E) factor, thereby indirectly regulating the transcription of the cycA and rpoE genes [H]

COG id: COG3806

COG function: function code T; Anti-sigma factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012807
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23524; Mature: 23392

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSHHPSESLLAAYAAGVLGEGASLIVAAHLTLCPHCRGAVDHLEALGGALLEEMAPLA
CCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LAEGALDAVLARLDTPAAPSPTRATASRLPPPMGEAALLPAPLRRHLADPSAATLPWRAI
HHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHH
APGIRQIALLPRTAGGGNAHLLKIAPKTALPRHGHHGQEYTLVLAGAFQDRSERFARGDV
CCHHHHEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCH
AEVEADRVHQPITDGQDCLCLVVTEGPLRYMGMIPRLMQPFTGF
HHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLSHHPSESLLAAYAAGVLGEGASLIVAAHLTLCPHCRGAVDHLEALGGALLEEMAPLA
CCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LAEGALDAVLARLDTPAAPSPTRATASRLPPPMGEAALLPAPLRRHLADPSAATLPWRAI
HHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHH
APGIRQIALLPRTAGGGNAHLLKIAPKTALPRHGHHGQEYTLVLAGAFQDRSERFARGDV
CCHHHHEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCH
AEVEADRVHQPITDGQDCLCLVVTEGPLRYMGMIPRLMQPFTGF
HHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721683 [H]