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The map label for this gene is ydhD [C]

Identifier: 83592044

GI number: 83592044

Start: 833730

End: 834059

Strand: Reverse

Name: ydhD [C]

Synonym: Rru_A0705

Alternate gene names: 83592044

Gene position: 834059-833730 (Counterclockwise)

Preceding gene: 83592045

Following gene: 83592043

Centisome position: 19.16

GC content: 60.3

Gene sequence:

>330_bases
ATGAGCGTTCAGGACCGCATCAAAAGCGAAGTCGACGGCACCCCCGTCGTCCTGTTCATGAAGGGAACCCCGGCGTTTCC
CCAATGCGGCTTTTCCGCCGCCGTCGTTCAGGTGCTCAACCACTACGGCGTCGCCTTCAAGGGCATCAACGTCCTTGAGG
ACGACGAAATCCGTCAGGGCATCAAGGAATTCGCTAATTGGCCGACCCTGCCGCAGCTTTATGTGAAGGGCGAGTTCGTT
GGCGGCTGCGACATCGTGCGCGAAATGGCCGCCGATGGCGAACTGGCCACCCTGTTTGAAAAAAGCGGCATCCCGACCAC
CGCCGCCTGA

Upstream 100 bases:

>100_bases
CAGGAATACCCCTAAAAGGATTGGAATTGACAGCCGCCCTCCGGCCATCCCATATCGCGCCCAGGTTCCCCCCTCCGATC
CCCTTTGAAAGGACTGCCCG

Downstream 100 bases:

>100_bases
TCACAACAGTCCATCCTGGCCAAGACTATCAAAGGGTCGTCCCCGGCGGGCGGCCCTTTTGTTTGAGCCGACCGCGCCAC
GACCGGGGCGCATTGACCCC

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSVQDRIKSEVDGTPVVLFMKGTPAFPQCGFSAAVVQVLNHYGVAFKGINVLEDDEIRQGIKEFANWPTLPQLYVKGEFV
GGCDIVREMAADGELATLFEKSGIPTTAA

Sequences:

>Translated_109_residues
MSVQDRIKSEVDGTPVVLFMKGTPAFPQCGFSAAVVQVLNHYGVAFKGINVLEDDEIRQGIKEFANWPTLPQLYVKGEFV
GGCDIVREMAADGELATLFEKSGIPTTAA
>Mature_108_residues
SVQDRIKSEVDGTPVVLFMKGTPAFPQCGFSAAVVQVLNHYGVAFKGINVLEDDEIRQGIKEFANWPTLPQLYVKGEFVG
GCDIVREMAADGELATLFEKSGIPTTAA

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=104, Percent_Identity=50.9615384615385, Blast_Score=117, Evalue=3e-27,
Organism=Homo sapiens, GI95113651, Length=93, Percent_Identity=49.4623655913978, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1787943, Length=99, Percent_Identity=45.4545454545455, Blast_Score=105, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17556042, Length=104, Percent_Identity=50.9615384615385, Blast_Score=113, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71988153, Length=91, Percent_Identity=48.3516483516484, Blast_Score=103, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71988159, Length=98, Percent_Identity=41.8367346938776, Blast_Score=101, Evalue=7e-23,
Organism=Saccharomyces cerevisiae, GI6325198, Length=103, Percent_Identity=54.3689320388349, Blast_Score=124, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6320303, Length=86, Percent_Identity=46.5116279069767, Blast_Score=100, Evalue=6e-23,
Organism=Saccharomyces cerevisiae, GI6321022, Length=86, Percent_Identity=45.3488372093023, Blast_Score=99, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24642023, Length=94, Percent_Identity=47.8723404255319, Blast_Score=111, Evalue=9e-26,
Organism=Drosophila melanogaster, GI19921242, Length=99, Percent_Identity=38.3838383838384, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11779; Mature: 11647

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQDRIKSEVDGTPVVLFMKGTPAFPQCGFSAAVVQVLNHYGVAFKGINVLEDDEIRQG
CCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
IKEFANWPTLPQLYVKGEFVGGCDIVREMAADGELATLFEKSGIPTTAA
HHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SVQDRIKSEVDGTPVVLFMKGTPAFPQCGFSAAVVQVLNHYGVAFKGINVLEDDEIRQG
CHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
IKEFANWPTLPQLYVKGEFVGGCDIVREMAADGELATLFEKSGIPTTAA
HHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]