| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83592014
Identifier: 83592014
GI number: 83592014
Start: 797870
End: 798844
Strand: Direct
Name: 83592014
Synonym: Rru_A0675
Alternate gene names: NA
Gene position: 797870-798844 (Clockwise)
Preceding gene: 83592013
Following gene: 83592015
Centisome position: 18.33
GC content: 44.72
Gene sequence:
>975_bases ATGAAATTCAAAAATAAGTTCGAAGAAGATGTTTTTGCAACTGCGCACAAGCACATTGCCAATGCGAGGATTGAACACAA CAAAGTCGTCAAGGTCGCCTCAACACATCACCCAGAAATTGCGTCATTCTCGGGTCCACCGAAGAAAGAGGTTGATGTTA TCGTTGCCGATATTGGCGGCGTAACTTTGTTGATTAGCTGCAAAGATTATTCAAAAGCCGCCTCTCCGGGAGATGTGCAG GAATGGGATTCCGTCGTAAAGGCAATGAACCAGTACGGTGGTGGTCGGCATTATGTTGGCATAGTAATTTGCTCTTCTGG GTTCTCTGAGGGATGTGAGCCTTGGGCATCGGCAGCAAATCTTATGCTAATTCCACCGTATCGTCCCGAAAGTGATAAGC TGGAACGACATCAAATCTTCTCCATGCTGAATCGAGTGCTTGGGGCGCTTCAGAAGCGAATTGCGATATCTACCAACGGG TTATTCGAAGCTCCAAATCTATACGATTTTGGGTTTAAATTGACCGATGGCTTCGAGGAAATGTGGCGTCGCAAGAAGGA AAGTCAGCGGTATGAATTTGGCGAAGAGCGGTGGATATCGTCGTTTTCAGAGCTTGTAAACAATGTTGTCGGAAAGAATG TTGTTGGACTGAAGGCGACGGATAACTCAGTAATAGTTACCCTCGATCCTCCTTATTGGGTTTCAGTTGGAATTGATAAA ATTCACCACTCAAGAAATCAAATTTTCGCCCAAGAAAAATCCGATGAATTTCAATGCCGTAAAAACATGATGGAGCCATC TCCATGCACAAAGTTTCTTGTGGATGAAATTTGCGTTGGAAGAGCAATCAGTTCCGCATGCGATTGGGGAGATTCGTTAG AGTTCGGGATTGATGGCAAATTTAATTTGCGCATCTTCTCGTCCATGCTTTGGATTTACTCAACCGAAAATCCGCCTGAA GCGCATATGCTGTGA
Upstream 100 bases:
>100_bases ATGCTGTTTTTGTCGTGCGGGAAGAGAGCGGGCTTAGGAAGGTGTACGCGAAAAACCTCCTACCTGGGTCTATTTTAGTT ACAGGCGAAAAGGTATTCCG
Downstream 100 bases:
>100_bases CTGAAGCCCTTCAGCCTCTTCGAACAGCGCATCAGTGGCGTCGGCAAGGGGGCGGGACAGTCGCTTGGCTTCATCGAGCG ATTTTGTCGCCAGCGACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKFKNKFEEDVFATAHKHIANARIEHNKVVKVASTHHPEIASFSGPPKKEVDVIVADIGGVTLLISCKDYSKAASPGDVQ EWDSVVKAMNQYGGGRHYVGIVICSSGFSEGCEPWASAANLMLIPPYRPESDKLERHQIFSMLNRVLGALQKRIAISTNG LFEAPNLYDFGFKLTDGFEEMWRRKKESQRYEFGEERWISSFSELVNNVVGKNVVGLKATDNSVIVTLDPPYWVSVGIDK IHHSRNQIFAQEKSDEFQCRKNMMEPSPCTKFLVDEICVGRAISSACDWGDSLEFGIDGKFNLRIFSSMLWIYSTENPPE AHML
Sequences:
>Translated_324_residues MKFKNKFEEDVFATAHKHIANARIEHNKVVKVASTHHPEIASFSGPPKKEVDVIVADIGGVTLLISCKDYSKAASPGDVQ EWDSVVKAMNQYGGGRHYVGIVICSSGFSEGCEPWASAANLMLIPPYRPESDKLERHQIFSMLNRVLGALQKRIAISTNG LFEAPNLYDFGFKLTDGFEEMWRRKKESQRYEFGEERWISSFSELVNNVVGKNVVGLKATDNSVIVTLDPPYWVSVGIDK IHHSRNQIFAQEKSDEFQCRKNMMEPSPCTKFLVDEICVGRAISSACDWGDSLEFGIDGKFNLRIFSSMLWIYSTENPPE AHML >Mature_324_residues MKFKNKFEEDVFATAHKHIANARIEHNKVVKVASTHHPEIASFSGPPKKEVDVIVADIGGVTLLISCKDYSKAASPGDVQ EWDSVVKAMNQYGGGRHYVGIVICSSGFSEGCEPWASAANLMLIPPYRPESDKLERHQIFSMLNRVLGALQKRIAISTNG LFEAPNLYDFGFKLTDGFEEMWRRKKESQRYEFGEERWISSFSELVNNVVGKNVVGLKATDNSVIVTLDPPYWVSVGIDK IHHSRNQIFAQEKSDEFQCRKNMMEPSPCTKFLVDEICVGRAISSACDWGDSLEFGIDGKFNLRIFSSMLWIYSTENPPE AHML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36478; Mature: 36478
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKNKFEEDVFATAHKHIANARIEHNKVVKVASTHHPEIASFSGPPKKEVDVIVADIGG CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCC VTLLISCKDYSKAASPGDVQEWDSVVKAMNQYGGGRHYVGIVICSSGFSEGCEPWASAAN EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHCCCC LMLIPPYRPESDKLERHQIFSMLNRVLGALQKRIAISTNGLFEAPNLYDFGFKLTDGFEE EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEECCCEECCCHHH MWRRKKESQRYEFGEERWISSFSELVNNVVGKNVVGLKATDNSVIVTLDPPYWVSVGIDK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCEEEEECHHH IHHSRNQIFAQEKSDEFQCRKNMMEPSPCTKFLVDEICVGRAISSACDWGDSLEFGIDGK HHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCE FNLRIFSSMLWIYSTENPPEAHML EEHHHHHHEEEEEECCCCCCCCCC >Mature Secondary Structure MKFKNKFEEDVFATAHKHIANARIEHNKVVKVASTHHPEIASFSGPPKKEVDVIVADIGG CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCC VTLLISCKDYSKAASPGDVQEWDSVVKAMNQYGGGRHYVGIVICSSGFSEGCEPWASAAN EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHCCCC LMLIPPYRPESDKLERHQIFSMLNRVLGALQKRIAISTNGLFEAPNLYDFGFKLTDGFEE EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEECCCEECCCHHH MWRRKKESQRYEFGEERWISSFSELVNNVVGKNVVGLKATDNSVIVTLDPPYWVSVGIDK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCEEEEECHHH IHHSRNQIFAQEKSDEFQCRKNMMEPSPCTKFLVDEICVGRAISSACDWGDSLEFGIDGK HHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCE FNLRIFSSMLWIYSTENPPEAHML EEHHHHHHEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA