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The map label for this gene is puhA [H]

Identifier: 83591956

GI number: 83591956

Start: 731245

End: 732018

Strand: Reverse

Name: puhA [H]

Synonym: Rru_A0617

Alternate gene names: 83591956

Gene position: 732018-731245 (Counterclockwise)

Preceding gene: 83591957

Following gene: 83591955

Centisome position: 16.82

GC content: 62.92

Gene sequence:

>774_bases
ATGAATAAAGGCGACATTACCGGCTACATGGACGTTGCCCAGGTCGTTCTTTACGCGTTCTGGATCTTCTTTGCCGGCTT
GATCATCTATTTGCGCCGGGAAGACCGCCGCGAAGGATATCCGCTGGAAGATGCCATCAGCGGCAAGATCAACTCCCTGC
AGGGATTGGGCTCCGTTTTCAGCATCGCCCGTCCCAAGATCTTCAAGCTGAAGACCGGCGCCACCTATGCGGCCCCGAAC
TTCAAGCGCGATGCCGTCGCGATCAAAGCCACGCGCACCGCGCCGACCGCCGGCGCTCCCTTCGAGCCCACCGGCAACCC
GATGACCGACGCCGTCGGTCCGGCCGCTTACGCGCTGCGTGACGAGCTGCCCGATCTGACCCTCGGTGGTCAGCCGGCCA
TCGTTCCGCTGCGTGTGGCCCCGACCTTCTCGGTCGCCGCCGAAGACACCGATCCGCGCGGCCTGCCCGTCGTCGACCGC
AAGGGCGCGGTCGCCGGCAAGGTCACCGACCTGTGGATCGACCGTGCCAGCATCGCCATCCGTTATCTGGAAGTCGAGCT
GGCCGCCACCCCGGGCCGCAAGGTTCTGCTGCCCTTCGCCGCCACGCGCATCAACGCCAAGACCAAGTCCAAGACGGTCA
CGGTGCAGTCGATTCTGGCCCGTCATTTTGCTAACGTTCCGACGATCGCCAAGACCGACAGCATCACCCGTCGTGAAGAA
GACAAGGTCATGGCCTATTATTCCAGCGGTTACCTGTATTCCGACCGCGTGTAA

Upstream 100 bases:

>100_bases
CTCGTTCGTACGGCCGGACACCGCGCGTCCCAGTCTTCGGAAGGACGTTTCGGTTTGGCCGAGTTCCCAGGATAGCACGT
CACCCTCAGGAGGCCTTCTC

Downstream 100 bases:

>100_bases
TTGGGGGATTGCCACATGGATGAGTACGATTCCGAACCGATCCGTGGACTGCCTGCGGATCTGCCGCCGGGCGAATTCAT
CCTGTGGCAGGGCGCGCCGA

Product: photosynthetic reaction center, H-chain

Products: NA

Alternate protein names: Photosynthetic reaction center H subunit [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNKGDITGYMDVAQVVLYAFWIFFAGLIIYLRREDRREGYPLEDAISGKINSLQGLGSVFSIARPKIFKLKTGATYAAPN
FKRDAVAIKATRTAPTAGAPFEPTGNPMTDAVGPAAYALRDELPDLTLGGQPAIVPLRVAPTFSVAAEDTDPRGLPVVDR
KGAVAGKVTDLWIDRASIAIRYLEVELAATPGRKVLLPFAATRINAKTKSKTVTVQSILARHFANVPTIAKTDSITRREE
DKVMAYYSSGYLYSDRV

Sequences:

>Translated_257_residues
MNKGDITGYMDVAQVVLYAFWIFFAGLIIYLRREDRREGYPLEDAISGKINSLQGLGSVFSIARPKIFKLKTGATYAAPN
FKRDAVAIKATRTAPTAGAPFEPTGNPMTDAVGPAAYALRDELPDLTLGGQPAIVPLRVAPTFSVAAEDTDPRGLPVVDR
KGAVAGKVTDLWIDRASIAIRYLEVELAATPGRKVLLPFAATRINAKTKSKTVTVQSILARHFANVPTIAKTDSITRREE
DKVMAYYSSGYLYSDRV
>Mature_257_residues
MNKGDITGYMDVAQVVLYAFWIFFAGLIIYLRREDRREGYPLEDAISGKINSLQGLGSVFSIARPKIFKLKTGATYAAPN
FKRDAVAIKATRTAPTAGAPFEPTGNPMTDAVGPAAYALRDELPDLTLGGQPAIVPLRVAPTFSVAAEDTDPRGLPVVDR
KGAVAGKVTDLWIDRASIAIRYLEVELAATPGRKVLLPFAATRINAKTKSKTVTVQSILARHFANVPTIAKTDSITRREE
DKVMAYYSSGYLYSDRV

Specific function: The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular chromatophore membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the reaction center puhA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005652
- InterPro:   IPR014747
- InterPro:   IPR015810
- InterPro:   IPR007903
- InterPro:   IPR011033 [H]

Pfam domain/function: PF05239 PRC; PF03967 PRCH [H]

EC number: NA

Molecular weight: Translated: 27941; Mature: 27941

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKGDITGYMDVAQVVLYAFWIFFAGLIIYLRREDRREGYPLEDAISGKINSLQGLGSVF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHH
SIARPKIFKLKTGATYAAPNFKRDAVAIKATRTAPTAGAPFEPTGNPMTDAVGPAAYALR
HHCCCEEEEEECCCEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHCCHHHHHHH
DELPDLTLGGQPAIVPLRVAPTFSVAAEDTDPRGLPVVDRKGAVAGKVTDLWIDRASIAI
HCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCEECCCCCCCCCHHHHEEEHHHEEE
RYLEVELAATPGRKVLLPFAATRINAKTKSKTVTVQSILARHFANVPTIAKTDSITRREE
EEEEEEEEECCCCEEEEEEHHEEECCCCCCCEEHHHHHHHHHHCCCCCEECCCCCCCCCC
DKVMAYYSSGYLYSDRV
CCEEEEEECCEEEECCC
>Mature Secondary Structure
MNKGDITGYMDVAQVVLYAFWIFFAGLIIYLRREDRREGYPLEDAISGKINSLQGLGSVF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHH
SIARPKIFKLKTGATYAAPNFKRDAVAIKATRTAPTAGAPFEPTGNPMTDAVGPAAYALR
HHCCCEEEEEECCCEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHCCHHHHHHH
DELPDLTLGGQPAIVPLRVAPTFSVAAEDTDPRGLPVVDRKGAVAGKVTDLWIDRASIAI
HCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCEECCCCCCCCCHHHHEEEHHHEEE
RYLEVELAATPGRKVLLPFAATRINAKTKSKTVTVQSILARHFANVPTIAKTDSITRREE
EEEEEEEEECCCCEEEEEEHHEEECCCCCCCEEHHHHHHHHHHCCCCCEECCCCCCCCCC
DKVMAYYSSGYLYSDRV
CCEEEEEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6392571; 9351808; 10024457; 2676514 [H]