| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is bchJ [H]
Identifier: 83591952
GI number: 83591952
Start: 728248
End: 728883
Strand: Reverse
Name: bchJ [H]
Synonym: Rru_A0613
Alternate gene names: 83591952
Gene position: 728883-728248 (Counterclockwise)
Preceding gene: 83591953
Following gene: 83591951
Centisome position: 16.75
GC content: 71.54
Gene sequence:
>636_bases ATGGATCCCTCCCCATCCGCCACCCCGATCCCCCCCCACGGCCGTATCGGGCCCAATGCCATCATCCGCGTCATTGACGC GCTGCGGACCACCATCGGCGAAACCGCCTGCGCCCGCATCGTCGAAGAGGCCGGGCTCGCCACCTATCTCGACCAGCCGC CCCAGGCCATGGTCGATGAAACCGAGGTCGCCAGATTGCACGGCGCCCTGCGCGCCAATCTTGACCGCGAGACCGCCGAG GCGGTCTGTCGCGACGCCGGCGAGGCCACCGCCGGCTATCTGCTGGCCAATCGCATCCCCGCCGCCGCGCAAAGCGTCAT CAAGCTGTTGCCGCCGGGGCTGGGCAGCCGCGCCCTGCTCGCCGGCATCGGCCGTCACGCCTGGACCTTCGCCGGCAGCG GCCAGTTCACCATCCGCCATGGCACCCCCCTGGTGCTCTCGATCGCCCATTGCCCGCTGTGCCATGCCCTCGCCGGCCAC GCCCCGGCCTGTTCCTATTACGCGGCGACCTTCGAGGGCCTCTACCGGGTTCTGATCAGCCCCCATGCCCGGGTGCGCGA AATCGCCTGCCAAGCCGCCGGCGCGCCGGCCTGCCAGTTCGCCGTCACCTGGACGCGGGCGGCGAGCGCGCCGTGA
Upstream 100 bases:
>100_bases CGCCGGTCACACCCGGCCCTCGCGCCGCAGCCAAATGCCAGGTAAGCTCCGTCGAGTCCTGAGCGCTCCCCGTTCCCACC GCCCGAGGCTTCGTTCCGCC
Downstream 100 bases:
>100_bases GTCCGGCAAAGGGCAGCAACCGGCCGCCCGACGCGCTGCGCGTCTCCCAGGCTGAACGACTGCGGCGCTCTTTCCCCCGA TGACCCGCCGCCCGATTTTT
Product: bacteriochlorophyll 4-vinyl reductase
Products: NA
Alternate protein names: 4-vinyl reductase [H]
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MDPSPSATPIPPHGRIGPNAIIRVIDALRTTIGETACARIVEEAGLATYLDQPPQAMVDETEVARLHGALRANLDRETAE AVCRDAGEATAGYLLANRIPAAAQSVIKLLPPGLGSRALLAGIGRHAWTFAGSGQFTIRHGTPLVLSIAHCPLCHALAGH APACSYYAATFEGLYRVLISPHARVREIACQAAGAPACQFAVTWTRAASAP
Sequences:
>Translated_211_residues MDPSPSATPIPPHGRIGPNAIIRVIDALRTTIGETACARIVEEAGLATYLDQPPQAMVDETEVARLHGALRANLDRETAE AVCRDAGEATAGYLLANRIPAAAQSVIKLLPPGLGSRALLAGIGRHAWTFAGSGQFTIRHGTPLVLSIAHCPLCHALAGH APACSYYAATFEGLYRVLISPHARVREIACQAAGAPACQFAVTWTRAASAP >Mature_211_residues MDPSPSATPIPPHGRIGPNAIIRVIDALRTTIGETACARIVEEAGLATYLDQPPQAMVDETEVARLHGALRANLDRETAE AVCRDAGEATAGYLLANRIPAAAQSVIKLLPPGLGSRALLAGIGRHAWTFAGSGQFTIRHGTPLVLSIAHCPLCHALAGH APACSYYAATFEGLYRVLISPHARVREIACQAAGAPACQFAVTWTRAASAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010249 - InterPro: IPR004096 [H]
Pfam domain/function: PF02830 V4R [H]
EC number: NA
Molecular weight: Translated: 22056; Mature: 22056
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPSPSATPIPPHGRIGPNAIIRVIDALRTTIGETACARIVEEAGLATYLDQPPQAMVDE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHH TEVARLHGALRANLDRETAEAVCRDAGEATAGYLLANRIPAAAQSVIKLLPPGLGSRALL HHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHH AGIGRHAWTFAGSGQFTIRHGTPLVLSIAHCPLCHALAGHAPACSYYAATFEGLYRVLIS HHHCHHHEEECCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC PHARVREIACQAAGAPACQFAVTWTRAASAP CHHHHHHHHHHHCCCCCHHEEEEEHHCCCCC >Mature Secondary Structure MDPSPSATPIPPHGRIGPNAIIRVIDALRTTIGETACARIVEEAGLATYLDQPPQAMVDE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHH TEVARLHGALRANLDRETAEAVCRDAGEATAGYLLANRIPAAAQSVIKLLPPGLGSRALL HHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHH AGIGRHAWTFAGSGQFTIRHGTPLVLSIAHCPLCHALAGHAPACSYYAATFEGLYRVLIS HHHCHHHEEECCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC PHARVREIACQAAGAPACQFAVTWTRAASAP CHHHHHHHHHHHCCCCCHHEEEEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10648776 [H]