| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is bcsP31 [H]
Identifier: 83591947
GI number: 83591947
Start: 720126
End: 721106
Strand: Direct
Name: bcsP31 [H]
Synonym: Rru_A0608
Alternate gene names: 83591947
Gene position: 720126-721106 (Clockwise)
Preceding gene: 83591945
Following gene: 83591948
Centisome position: 16.54
GC content: 65.55
Gene sequence:
>981_bases ATGAGGTTCGCGTTCGCTGTGCTCTTCGCCCTGACGGTGGCGGCGATGCCTGCGGGATTTGGCGGAGGGGCGGCGCTGGC GGCCGATCCGCGGATTGTCACCATCGGTACGGGCGGGGTCACCGGCGTTTATTACCCGGCCGGCGGCGCCATCTGTCGCA TGGTCAACAAGCATCGGGCCGAGCATGGCATCCGCTGTGCGGTGGAAGCGACCGATGGCTCGGTCGAAAACCTCGAATCC TTGCGCGCCGGCGACCTTGATCTGGGGATCGCCCAGGCGGACTGGGTTCATCACGCCTGGGAAGGCGGTGCCAAGTACCA GAACCGGGCGGCGTTTGCCGGTCTGCGCACCCTGCTTGAACTCCATGCCGAATCCTTCACCGTGGTCGCGCGCAAGGCGA CGGGCATTCGCACCTTCGACGATCTCAAGGGGCGTCGGGTCAGCCTGGGGATCACCGGATCGGGACAGCGGGCGACGGCC GAGGTGTTGCTGGCGGCGATGGACTGGACCTTGAAGGATTTTTCCGCCGTTCCCGAGGTCAAGCCGGCCGAGCAATCGGC GGCGCTCTGCGATGACCGGGTCGATGCCATCATCTATGTGGTCGGCCATCCCAATGGGGCGATCATCGAGGCAACCACCT CGTGCGATGCCGGCTTCGTCGCCGTCGACAACGCCGGGACCGCCAGCCTGATCGCCGAGAACCCCTTCTATGCCAAGACC GTCATCCCGGCCAAGCTGTACCGGGGAAACCCCGCCGATACGCCGACCTTCGGCGTCCATGCCACCTTGGTCGCCACCGC CGCCTTGCCCGATGACGTGGCCTATGCCCTGGTCAAGGCGGTGATGGAGAACTTCGACGATTTCCGCAAGCTCCATCCCG CCTTCGCCGGGCTGGTCCGCGAGTCCATGGTGCCCGCTCAGTCCACGGTGCCTGTGCACCCGGGGGCTTTACGCTATTTC CAGGAAATCGGCTTACGGTAA
Upstream 100 bases:
>100_bases TCGGCGGATGGCTCCACATTCAAAGCCATCCCGATGCCATCGGTCCCGTTGTGGTCCGCTTTTTGGCCCCCGGCCCCCTG GGCCCCGGAGGAGAGGTCCC
Downstream 100 bases:
>100_bases AGTCCCGGGCCCCCAAGCGGGCGCGATACACCGCCAAGCGCACGCGGGCCATTCCCTAAAACCCCGTTCTGCCCGATGAT CGGGGGACGGACCGGGGTCT
Product: TRAP transporter solute receptor TAXI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MRFAFAVLFALTVAAMPAGFGGGAALAADPRIVTIGTGGVTGVYYPAGGAICRMVNKHRAEHGIRCAVEATDGSVENLES LRAGDLDLGIAQADWVHHAWEGGAKYQNRAAFAGLRTLLELHAESFTVVARKATGIRTFDDLKGRRVSLGITGSGQRATA EVLLAAMDWTLKDFSAVPEVKPAEQSAALCDDRVDAIIYVVGHPNGAIIEATTSCDAGFVAVDNAGTASLIAENPFYAKT VIPAKLYRGNPADTPTFGVHATLVATAALPDDVAYALVKAVMENFDDFRKLHPAFAGLVRESMVPAQSTVPVHPGALRYF QEIGLR
Sequences:
>Translated_326_residues MRFAFAVLFALTVAAMPAGFGGGAALAADPRIVTIGTGGVTGVYYPAGGAICRMVNKHRAEHGIRCAVEATDGSVENLES LRAGDLDLGIAQADWVHHAWEGGAKYQNRAAFAGLRTLLELHAESFTVVARKATGIRTFDDLKGRRVSLGITGSGQRATA EVLLAAMDWTLKDFSAVPEVKPAEQSAALCDDRVDAIIYVVGHPNGAIIEATTSCDAGFVAVDNAGTASLIAENPFYAKT VIPAKLYRGNPADTPTFGVHATLVATAALPDDVAYALVKAVMENFDDFRKLHPAFAGLVRESMVPAQSTVPVHPGALRYF QEIGLR >Mature_326_residues MRFAFAVLFALTVAAMPAGFGGGAALAADPRIVTIGTGGVTGVYYPAGGAICRMVNKHRAEHGIRCAVEATDGSVENLES LRAGDLDLGIAQADWVHHAWEGGAKYQNRAAFAGLRTLLELHAESFTVVARKATGIRTFDDLKGRRVSLGITGSGQRATA EVLLAAMDWTLKDFSAVPEVKPAEQSAALCDDRVDAIIYVVGHPNGAIIEATTSCDAGFVAVDNAGTASLIAENPFYAKT VIPAKLYRGNPADTPTFGVHATLVATAALPDDVAYALVKAVMENFDDFRKLHPAFAGLVRESMVPAQSTVPVHPGALRYF QEIGLR
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 34365; Mature: 34365
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFAFAVLFALTVAAMPAGFGGGAALAADPRIVTIGTGGVTGVYYPAGGAICRMVNKHRA CHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCEEEECCCHHHHHHHHHHHH EHGIRCAVEATDGSVENLESLRAGDLDLGIAQADWVHHAWEGGAKYQNRAAFAGLRTLLE CCCCEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LHAESFTVVARKATGIRTFDDLKGRRVSLGITGSGQRATAEVLLAAMDWTLKDFSAVPEV HHHCCEEEEEECCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCCC KPAEQSAALCDDRVDAIIYVVGHPNGAIIEATTSCDAGFVAVDNAGTASLIAENPFYAKT CCCHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCEEEECCCCCEEEEECCCCEEEE VIPAKLYRGNPADTPTFGVHATLVATAALPDDVAYALVKAVMENFDDFRKLHPAFAGLVR ECCHHHCCCCCCCCCCCCHHHHHHEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH ESMVPAQSTVPVHPGALRYFQEIGLR HHCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MRFAFAVLFALTVAAMPAGFGGGAALAADPRIVTIGTGGVTGVYYPAGGAICRMVNKHRA CHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCEEEECCCHHHHHHHHHHHH EHGIRCAVEATDGSVENLESLRAGDLDLGIAQADWVHHAWEGGAKYQNRAAFAGLRTLLE CCCCEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LHAESFTVVARKATGIRTFDDLKGRRVSLGITGSGQRATAEVLLAAMDWTLKDFSAVPEV HHHCCEEEEEECCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCCC KPAEQSAALCDDRVDAIIYVVGHPNGAIIEATTSCDAGFVAVDNAGTASLIAENPFYAKT CCCHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCEEEECCCCCEEEEECCCCEEEE VIPAKLYRGNPADTPTFGVHATLVATAALPDDVAYALVKAVMENFDDFRKLHPAFAGLVR ECCHHHCCCCCCCCCCCCHHHHHHEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH ESMVPAQSTVPVHPGALRYFQEIGLR HHCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]