| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is yeiH [C]
Identifier: 83591944
GI number: 83591944
Start: 717390
End: 718445
Strand: Direct
Name: yeiH [C]
Synonym: Rru_A0605
Alternate gene names: 83591944
Gene position: 717390-718445 (Clockwise)
Preceding gene: 83591943
Following gene: 83591945
Centisome position: 16.48
GC content: 69.03
Gene sequence:
>1056_bases ATGATGCGTTTCCGTTCCACCGCCGCCGTTTTGCCCGTTCCCCCCGCCGGAGTCATCGCGGGGATGTTCGCCGCCCTTCC CGGCCTTGGCTTGGCCTTTGCCGTGGCCGGGAGCGGGTTTTTGCTCCATCGCCTGCCGGGGCTCGACAGGATCAGCCCGC TGATCGTGTCGATCATCCTGGGCATGGCGGTCAATAGCCTGTGGGCGATGCCGCTGCGGGCCAAACCGGGGCTGCGCGTG GCGTCGCGGCGCCTGCTTCGGCTGGCCGTGGTTCTTTTGGGGCTGCAGATCACCTTTGATCACCTGCGGGCGTTGGGCGC CCCGGGGATGGCGGTGGTCGCCCTGACCCTGCTTCTGACCTTTTTGCTGACCAAGGCTTTGGGGCGGCTGATCGGTGTCG AACGGGGCTTGGCCGAATTGATCGCCGTCGGCACGGCGGTCTGCGGCGCCTCGGCGGTGGTCGCGGCCAATACGGTGACG CAGGCCGATGACGAGGACGTGGCCTATGCCATCGCCTGCGTCACCGTGTTCGGGACGCTGGCGATGATCCTCTATCCGTT GCTTGCCGGAGCGCTTGGCTTGGCTCCTGCGGCCTATGGGCTGTGGACCGGGGCGTCGATCCACGAGATCGCCCAGGTGC TGGCCGCCGGCTTCCAGCACGGTCCCCAGGCCGGCGAGGCGGCGACCGTGGCCAAGCTCGCCCGCATCGCCTTGCTCGCC CCTCTGGTCCTGGCGATGGGCCTGTGGAAGAGCCGAGGGGCGGACACGTCGGCCAAAGGGGCGCGGCCGCCCATTCCCTG GTTCGTGGTTGGGTTCATCGTCATGATCGGCGTCTCCAGCCTTATCCATCCGTCTGCCGCCCTCAGCCAGGGCGCGGCCA CCCTGACCAGCGTGCTGATGACGGTGGCCCTGGCGGCGATGGGGCTGGAAACCAGCCTGGGCAAATTGCGCGCGCGCGGC CTGCGGCCCTTGCTGCTCGGGGCCGCATCGTGGATGGTCGTCGGCCTGGGGGCCTTGGCGCTGGTGAAGGTCCTGACCAC TGGCGGAGGGGCGTGA
Upstream 100 bases:
>100_bases AATCGATAACTTCCAGTGATCGAAGTTATCAGATCCATTTGTTGGACTGATTGGTCAGAGTGATCAAGGATCGCGCTCCG TTCCCCCCGGAGAAGGTCCG
Downstream 100 bases:
>100_bases TGGGCGAGGCGACGGCGGCGACCCGGCTTAGCTTTGATCAACTCCGCACCTTTGTCGCCGTCGCCGAGCACCTGCATGTG ACGGCGGCGGCGCGCCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MMRFRSTAAVLPVPPAGVIAGMFAALPGLGLAFAVAGSGFLLHRLPGLDRISPLIVSIILGMAVNSLWAMPLRAKPGLRV ASRRLLRLAVVLLGLQITFDHLRALGAPGMAVVALTLLLTFLLTKALGRLIGVERGLAELIAVGTAVCGASAVVAANTVT QADDEDVAYAIACVTVFGTLAMILYPLLAGALGLAPAAYGLWTGASIHEIAQVLAAGFQHGPQAGEAATVAKLARIALLA PLVLAMGLWKSRGADTSAKGARPPIPWFVVGFIVMIGVSSLIHPSAALSQGAATLTSVLMTVALAAMGLETSLGKLRARG LRPLLLGAASWMVVGLGALALVKVLTTGGGA
Sequences:
>Translated_351_residues MMRFRSTAAVLPVPPAGVIAGMFAALPGLGLAFAVAGSGFLLHRLPGLDRISPLIVSIILGMAVNSLWAMPLRAKPGLRV ASRRLLRLAVVLLGLQITFDHLRALGAPGMAVVALTLLLTFLLTKALGRLIGVERGLAELIAVGTAVCGASAVVAANTVT QADDEDVAYAIACVTVFGTLAMILYPLLAGALGLAPAAYGLWTGASIHEIAQVLAAGFQHGPQAGEAATVAKLARIALLA PLVLAMGLWKSRGADTSAKGARPPIPWFVVGFIVMIGVSSLIHPSAALSQGAATLTSVLMTVALAAMGLETSLGKLRARG LRPLLLGAASWMVVGLGALALVKVLTTGGGA >Mature_351_residues MMRFRSTAAVLPVPPAGVIAGMFAALPGLGLAFAVAGSGFLLHRLPGLDRISPLIVSIILGMAVNSLWAMPLRAKPGLRV ASRRLLRLAVVLLGLQITFDHLRALGAPGMAVVALTLLLTFLLTKALGRLIGVERGLAELIAVGTAVCGASAVVAANTVT QADDEDVAYAIACVTVFGTLAMILYPLLAGALGLAPAAYGLWTGASIHEIAQVLAAGFQHGPQAGEAATVAKLARIALLA PLVLAMGLWKSRGADTSAKGARPPIPWFVVGFIVMIGVSSLIHPSAALSQGAATLTSVLMTVALAAMGLETSLGKLRARG LRPLLLGAASWMVVGLGALALVKVLTTGGGA
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=318, Percent_Identity=34.5911949685535, Blast_Score=156, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 35626; Mature: 35626
Theoretical pI: Translated: 11.44; Mature: 11.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRFRSTAAVLPVPPAGVIAGMFAALPGLGLAFAVAGSGFLLHRLPGLDRISPLIVSIIL CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHH GMAVNSLWAMPLRAKPGLRVASRRLLRLAVVLLGLQITFDHLRALGAPGMAVVALTLLLT HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FLLTKALGRLIGVERGLAELIAVGTAVCGASAVVAANTVTQADDEDVAYAIACVTVFGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AMILYPLLAGALGLAPAAYGLWTGASIHEIAQVLAAGFQHGPQAGEAATVAKLARIALLA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH PLVLAMGLWKSRGADTSAKGARPPIPWFVVGFIVMIGVSSLIHPSAALSQGAATLTSVLM HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TVALAAMGLETSLGKLRARGLRPLLLGAASWMVVGLGALALVKVLTTGGGA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMRFRSTAAVLPVPPAGVIAGMFAALPGLGLAFAVAGSGFLLHRLPGLDRISPLIVSIIL CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHH GMAVNSLWAMPLRAKPGLRVASRRLLRLAVVLLGLQITFDHLRALGAPGMAVVALTLLLT HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FLLTKALGRLIGVERGLAELIAVGTAVCGASAVVAANTVTQADDEDVAYAIACVTVFGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AMILYPLLAGALGLAPAAYGLWTGASIHEIAQVLAAGFQHGPQAGEAATVAKLARIALLA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH PLVLAMGLWKSRGADTSAKGARPPIPWFVVGFIVMIGVSSLIHPSAALSQGAATLTSVLM HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TVALAAMGLETSLGKLRARGLRPLLLGAASWMVVGLGALALVKVLTTGGGA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]