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The map label for this gene is yedY [H]

Identifier: 83591932

GI number: 83591932

Start: 704544

End: 705452

Strand: Direct

Name: yedY [H]

Synonym: Rru_A0593

Alternate gene names: 83591932

Gene position: 704544-705452 (Clockwise)

Preceding gene: 83591926

Following gene: 83591933

Centisome position: 16.19

GC content: 66.01

Gene sequence:

>909_bases
ATGCCCCTTCGACGCCCCCGCCGCTGGCAGCTTTCCGAGAACGCCGTTACCCCCTCGTCCCTGGTGCTGGGTCGCCGGAG
TTTCGTGGCCGGCGCCCTAGCCCTCTCCGCCGGGGTGGGCCTTGCCGCCCCTTCCGCGCGGGCCGCCGTCCCCGCCGACG
AGACGACCCCGCGCGAGGACGCCACCACCTATAACAATTTCTATGAATTCGGCTCCGACAAGGGCGATCCCGCCCGCTAT
AGCGGCGCCTTCCGCCCGACGCCTTGGGCGGTCACCATCGATGGCGAGGTCGAGCACCCGCAGACGATCGGCCTGGAGGA
TCTGCTGGCGGTCTCGGCCTTGGAAGAACGCATCTATCGCCTGCGCTGCGTCGAAGGCTGGTCGATGGTCATCCCGTGGA
TGGGCATTCCGCTGGCCAAGGTCCTCGCCCGCGCCGCTCCCTTGGCCTCGGCGAAATACGTCGCCTTCGAGACGGTTTTG
CGCCCCAGCGAAATGCCCGGCCAACGCACCCGCTTGCTCGACTGGCCCTATCGGGAAGGGTTGCGCCTGGACGAGGCGGT
CCATCCACTGACCTTCCTGGCCAGCGGCATGTATGGCGAGGCTTTGCCCAATCAGAACGGCGCGCCGCTGCGTTTGGTGG
TGCCGTGGAAATACGGCTTCAAGTCGATCAAATCGATCACCCGCATCACCCTGGTCCGCGACCAGCCGCCAACCACCTGG
AGCGCCCTTAACCCCCGGGAATACGGCTTTTATTCCAACGTCAACCCCGAGGTCGACCATCCGCGCTGGAGTCAGGCGCG
CGAGCGCCGCATCGGTGAATTCCGCCGCCGCGACACCGTGATGTTCAATGGCTACGGCGAAGAGGTCGCAAGCCTCTATG
CCGGCATGGATCTGCGGACCAATTACTGA

Upstream 100 bases:

>100_bases
GGGCGTCGCGAAAGGGGGGACGTATAGCGAAGGAAAGGGGCGCATTCGCCGGTTTTCCTCCCCATATCGGAATCTCCTTT
TTCTGGTGCGGAACCGTGAC

Downstream 100 bases:

>100_bases
TGACGGGCGGCTCGGTTTTGAAGGACCGCGACCGCCTGGGGCGGATCGCCGTCTTCGTCGCCTGCCTGCTGCCGCTTGTC
TGGTATGGGGCGCGCTTCGT

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MPLRRPRRWQLSENAVTPSSLVLGRRSFVAGALALSAGVGLAAPSARAAVPADETTPREDATTYNNFYEFGSDKGDPARY
SGAFRPTPWAVTIDGEVEHPQTIGLEDLLAVSALEERIYRLRCVEGWSMVIPWMGIPLAKVLARAAPLASAKYVAFETVL
RPSEMPGQRTRLLDWPYREGLRLDEAVHPLTFLASGMYGEALPNQNGAPLRLVVPWKYGFKSIKSITRITLVRDQPPTTW
SALNPREYGFYSNVNPEVDHPRWSQARERRIGEFRRRDTVMFNGYGEEVASLYAGMDLRTNY

Sequences:

>Translated_302_residues
MPLRRPRRWQLSENAVTPSSLVLGRRSFVAGALALSAGVGLAAPSARAAVPADETTPREDATTYNNFYEFGSDKGDPARY
SGAFRPTPWAVTIDGEVEHPQTIGLEDLLAVSALEERIYRLRCVEGWSMVIPWMGIPLAKVLARAAPLASAKYVAFETVL
RPSEMPGQRTRLLDWPYREGLRLDEAVHPLTFLASGMYGEALPNQNGAPLRLVVPWKYGFKSIKSITRITLVRDQPPTTW
SALNPREYGFYSNVNPEVDHPRWSQARERRIGEFRRRDTVMFNGYGEEVASLYAGMDLRTNY
>Mature_301_residues
PLRRPRRWQLSENAVTPSSLVLGRRSFVAGALALSAGVGLAAPSARAAVPADETTPREDATTYNNFYEFGSDKGDPARYS
GAFRPTPWAVTIDGEVEHPQTIGLEDLLAVSALEERIYRLRCVEGWSMVIPWMGIPLAKVLARAAPLASAKYVAFETVLR
PSEMPGQRTRLLDWPYREGLRLDEAVHPLTFLASGMYGEALPNQNGAPLRLVVPWKYGFKSIKSITRITLVRDQPPTTWS
ALNPREYGFYSNVNPEVDHPRWSQARERRIGEFRRRDTVMFNGYGEEVASLYAGMDLRTNY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=329, Percent_Identity=51.3677811550152, Blast_Score=322, Evalue=2e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 33860; Mature: 33729

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRRPRRWQLSENAVTPSSLVLGRRSFVAGALALSAGVGLAAPSARAAVPADETTPRED
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
ATTYNNFYEFGSDKGDPARYSGAFRPTPWAVTIDGEVEHPQTIGLEDLLAVSALEERIYR
CHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
LRCVEGWSMVIPWMGIPLAKVLARAAPLASAKYVAFETVLRPSEMPGQRTRLLDWPYREG
HHHHCCCEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCHHCC
LRLDEAVHPLTFLASGMYGEALPNQNGAPLRLVVPWKYGFKSIKSITRITLVRDQPPTTW
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHEEEEECCCCCCC
SALNPREYGFYSNVNPEVDHPRWSQARERRIGEFRRRDTVMFNGYGEEVASLYAGMDLRT
CCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHCCCEEC
NY
CC
>Mature Secondary Structure 
PLRRPRRWQLSENAVTPSSLVLGRRSFVAGALALSAGVGLAAPSARAAVPADETTPRED
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
ATTYNNFYEFGSDKGDPARYSGAFRPTPWAVTIDGEVEHPQTIGLEDLLAVSALEERIYR
CHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
LRCVEGWSMVIPWMGIPLAKVLARAAPLASAKYVAFETVLRPSEMPGQRTRLLDWPYREG
HHHHCCCEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCHHCC
LRLDEAVHPLTFLASGMYGEALPNQNGAPLRLVVPWKYGFKSIKSITRITLVRDQPPTTW
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHEEEEECCCCCCC
SALNPREYGFYSNVNPEVDHPRWSQARERRIGEFRRRDTVMFNGYGEEVASLYAGMDLRT
CCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHCCCEEC
NY
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]