| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591903
Identifier: 83591903
GI number: 83591903
Start: 667041
End: 668165
Strand: Direct
Name: 83591903
Synonym: Rru_A0564
Alternate gene names: NA
Gene position: 667041-668165 (Clockwise)
Preceding gene: 83591900
Following gene: 83591906
Centisome position: 15.32
GC content: 70.22
Gene sequence:
>1125_bases ATGACGATGTCCATTGACGGGGCCGCTTCGGCCCGGGTGTCGGCGCGCGCGGCGGACAAGTTCAAGGCCCTTCTCGCCGC CGCCGCCAAAGAGGCCAAACAGGCCGCCGACCAGCGCAAATCCGCCCAAGGCGATCGCGTCGAGTCGGCCTCCAGCAAAA TCCAAAGCGCCTATGATGCCCAGGGACGGCTTATCGCCGAGCGGGCGGCGCTTGAGCGCCTGGAAAAGGCCAAGGAGGCC GGCCGCAAGCTGTTGGAGGGCATCGAAGAGGTGACCCGTCAGGCCAAGGCGACCCGCGCGTCGCTGGCCAATAATCGCAA AGAGGCGGCCAAGGAACGCATCCGCCAGATCAAGCAGCAATTGCAGACCCTGCGCGCCCTGGCTGCCGCCGATCCCAAGG GCACGGCCAAGCGCGTCGCCCAGCTTGCCCGGGAACTGGCTTCGGCGGCCAAGGAGTATTCCTCGGCCGGCGGCGGCGGC GCGGGCGAAGGCGCCCTCTCTGGTGGCGCTTCCACGCCTTCGGCCATCGCCTCCGCCGGATCGGAGGCGGCGAACGCGAC CTCCGACAAGGCGGCCGAGGCGGCGAAGGCGCAAGCGGCCGAGGCGCCCGCCTCCGCAGCCGTCGTCGCTCCGGCCCCGG CCAGCGCCGGTCAGGCGGAGAGCGCCGACAAGAGCGAGGCTGCGGCGGGCGAGGACACGGGGGAGAAGGCCGCGCCGGGC AAGGCCGAGGCCAAGGCGGCGACGGCGTCGTTGGGCCAAAGCGACAAAAGCGGCGACCCGTCGTTCAAGGACGAAGTGAA GCGGCTGATGCGCGAGTTGAAGGCCCTTTACGCATTGGCCAAGCGTCTGGCCCAGCGCCGGGGGGCCAGCGAACAGGACT TCGCCCAAACCGATAAGGATATGCGGCAGGCCGGATTCGATGTCGAGGCGGCGCTGGCGCAAGTGGCGTCGCCAAGTGGC GCCGATGCGGGCGGGTCTACCGAAGGAGAGGCGGGCGAAGGAGAGGCGGGCGAAGGAGAGGGGATGGCCGAGGCTGACGG CGCGGCCGAGGATGTCGCCGCTGTCGACATGCCCCCCGATGTGAGCGCCGCGGCGGCCTTGCCGACGGTCTCGATTCTGG TGTGA
Upstream 100 bases:
>100_bases CAAAAGAAGATTGGCTGAAGCGGCCGCGAACCGCTACCATAGGCGGTAAGCCAGAATGGCTGAAGTAATCTACGCTCGGG TGTTCGGAGGAAACTGAACC
Downstream 100 bases:
>100_bases CCGTCCACCAGCGGCGAGCGGAGAGGGTCGGGGGGCCGGCTCCGCCCGCCGTCGTTTTGGAGAGGTCTTATTTCGACTGG GGCGCGGCCATAAGCTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MTMSIDGAASARVSARAADKFKALLAAAAKEAKQAADQRKSAQGDRVESASSKIQSAYDAQGRLIAERAALERLEKAKEA GRKLLEGIEEVTRQAKATRASLANNRKEAAKERIRQIKQQLQTLRALAAADPKGTAKRVAQLARELASAAKEYSSAGGGG AGEGALSGGASTPSAIASAGSEAANATSDKAAEAAKAQAAEAPASAAVVAPAPASAGQAESADKSEAAAGEDTGEKAAPG KAEAKAATASLGQSDKSGDPSFKDEVKRLMRELKALYALAKRLAQRRGASEQDFAQTDKDMRQAGFDVEAALAQVASPSG ADAGGSTEGEAGEGEAGEGEGMAEADGAAEDVAAVDMPPDVSAAAALPTVSILV
Sequences:
>Translated_374_residues MTMSIDGAASARVSARAADKFKALLAAAAKEAKQAADQRKSAQGDRVESASSKIQSAYDAQGRLIAERAALERLEKAKEA GRKLLEGIEEVTRQAKATRASLANNRKEAAKERIRQIKQQLQTLRALAAADPKGTAKRVAQLARELASAAKEYSSAGGGG AGEGALSGGASTPSAIASAGSEAANATSDKAAEAAKAQAAEAPASAAVVAPAPASAGQAESADKSEAAAGEDTGEKAAPG KAEAKAATASLGQSDKSGDPSFKDEVKRLMRELKALYALAKRLAQRRGASEQDFAQTDKDMRQAGFDVEAALAQVASPSG ADAGGSTEGEAGEGEAGEGEGMAEADGAAEDVAAVDMPPDVSAAAALPTVSILV >Mature_373_residues TMSIDGAASARVSARAADKFKALLAAAAKEAKQAADQRKSAQGDRVESASSKIQSAYDAQGRLIAERAALERLEKAKEAG RKLLEGIEEVTRQAKATRASLANNRKEAAKERIRQIKQQLQTLRALAAADPKGTAKRVAQLARELASAAKEYSSAGGGGA GEGALSGGASTPSAIASAGSEAANATSDKAAEAAKAQAAEAPASAAVVAPAPASAGQAESADKSEAAAGEDTGEKAAPGK AEAKAATASLGQSDKSGDPSFKDEVKRLMRELKALYALAKRLAQRRGASEQDFAQTDKDMRQAGFDVEAALAQVASPSGA DAGGSTEGEAGEGEAGEGEGMAEADGAAEDVAAVDMPPDVSAAAALPTVSILV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37518; Mature: 37386
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSIDGAASARVSARAADKFKALLAAAAKEAKQAADQRKSAQGDRVESASSKIQSAYDA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH QGRLIAERAALERLEKAKEAGRKLLEGIEEVTRQAKATRASLANNRKEAAKERIRQIKQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQTLRALAAADPKGTAKRVAQLARELASAAKEYSSAGGGGAGEGALSGGASTPSAIASAG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCC SEAANATSDKAAEAAKAQAAEAPASAAVVAPAPASAGQAESADKSEAAAGEDTGEKAAPG CHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC KAEAKAATASLGQSDKSGDPSFKDEVKRLMRELKALYALAKRLAQRRGASEQDFAQTDKD CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH MRQAGFDVEAALAQVASPSGADAGGSTEGEAGEGEAGEGEGMAEADGAAEDVAAVDMPPD HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC VSAAAALPTVSILV CHHHHHHCHHHHCC >Mature Secondary Structure TMSIDGAASARVSARAADKFKALLAAAAKEAKQAADQRKSAQGDRVESASSKIQSAYDA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH QGRLIAERAALERLEKAKEAGRKLLEGIEEVTRQAKATRASLANNRKEAAKERIRQIKQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQTLRALAAADPKGTAKRVAQLARELASAAKEYSSAGGGGAGEGALSGGASTPSAIASAG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCC SEAANATSDKAAEAAKAQAAEAPASAAVVAPAPASAGQAESADKSEAAAGEDTGEKAAPG CHHHCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC KAEAKAATASLGQSDKSGDPSFKDEVKRLMRELKALYALAKRLAQRRGASEQDFAQTDKD CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH MRQAGFDVEAALAQVASPSGADAGGSTEGEAGEGEAGEGEGMAEADGAAEDVAAVDMPPD HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC VSAAAALPTVSILV CHHHHHHCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA