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The map label for this gene is nagD [C]

Identifier: 83591854

GI number: 83591854

Start: 609465

End: 610352

Strand: Direct

Name: nagD [C]

Synonym: Rru_A0515

Alternate gene names: 83591854

Gene position: 609465-610352 (Clockwise)

Preceding gene: 83591853

Following gene: 83591855

Centisome position: 14.0

GC content: 67.91

Gene sequence:

>888_bases
ATGACCTCCCCCGTCGCCGCGCCGTTTTTCGCCCCTGGTTTGTCCGCTTTCGCCAAGGAGTATGACGCCTTCATCATCGA
TCTGTGGGGGGTGATCCACGACGGCACCCAGGCCTATCCCGGCGCCGCCGCGGCGCTCGCCGCGCTGAAGGCCCAGGGCA
AGCGCACGGTGCTGTTGACCAACGCGCCCCGGCTTTCGGGATCGGTGATCGCCCAGATGGAGGGACTTGGTCTGGGCCGC
GCGCTCTATGATGCGGTGATGACCTCGGGCGATGCGGTCAACGCCGAACTGCTGCGCCGCGATGATCCGTTCTTCCAAGG
TCTCGGCCAGGCTTGCCTGTTCGTCGGCCCCGAGCGCGATACCAATGTTCTGACCGATACTGGCGTCGCCCTTGTCACCG
ATCCGGCCAAGGCCGGCTTCGTTTTGTGTACCGGCCCGGTGTCGTTCGACGAAAGCGTCGCCGATTACGCTGCCCTGCTT
GAAGCCTGCGCCGCCCAGGGACTGCCGATGGTCTGCGCCAATCCCGACCGGGCGGTGGTGCGCGAGGGCAAGACGGTGAT
CTGCGCCGGCGCCCTGGCCGATTTCTATGCCGGGCTGGGTCAAACCGTGGTGTCGCGCGGCAAGCCCGATCCGGCGATCT
ATCGCCTTGCCCTCGAGCGGCTGGATCTGCCGGCCGGCGCCCGGGTGGCGGCGATCGGCGACGGGGTGCATACGGATATG
CCCGGCGCCCGGGCCGCCGGGGTCGACGCCGTCTTCGTCACCGGAGGCTTGAACGCCGAGCTTTTGGGTATCCGTCATGG
CGAGGCGCCCGACCAAGCCAAGGTCCGCGCCCTGCTGGACGCCCACGCCCTGACCCCGAAAATGGCCATTCCGGCCTTCG
TCTGGTAG

Upstream 100 bases:

>100_bases
TGCTCCCCGCTCGCCCCTCTAGGCTGTTGATCGTCAAGCAAATCGTCGTCGCGCTCTGCTCCAGAGCGTCGGGGATTTGC
TCCATAAGGACCCCGTACCG

Downstream 100 bases:

>100_bases
GGGCCCTGCCAAAGACCTTCGGCCCGACGGAGTCGACGGTTTGGGAGAGATCCGATGACCCTGATCAGAGCGGCGCGGCC
CGGGGATGCGCCGTTTCTTC

Product: HAD family hydrolase

Products: NA

Alternate protein names: HAD-Superfamily Subfamily IIA Hydrolase; HAD-Superfamily Hydrolase; HAD-Superfamily Hydrolase Subfamily IIA; HAD-Superfamily Subfamily IIA Hydrolase TIGR; HAD-Superfamily Subfamily IIA Hydrolase Like Protein; HAD Superfamily Hydrolase; Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Had-Superfamily Subfamily IIa Hydrolase Like Protein; Sugar Phosphatases Of HAD Superfamily; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase IIA; HAD Family Sugar Phosphatase; Sugar Phosphatase; HAD-Superfamily Subfamily IIA Hydrolase-Like Protein

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTSPVAAPFFAPGLSAFAKEYDAFIIDLWGVIHDGTQAYPGAAAALAALKAQGKRTVLLTNAPRLSGSVIAQMEGLGLGR
ALYDAVMTSGDAVNAELLRRDDPFFQGLGQACLFVGPERDTNVLTDTGVALVTDPAKAGFVLCTGPVSFDESVADYAALL
EACAAQGLPMVCANPDRAVVREGKTVICAGALADFYAGLGQTVVSRGKPDPAIYRLALERLDLPAGARVAAIGDGVHTDM
PGARAAGVDAVFVTGGLNAELLGIRHGEAPDQAKVRALLDAHALTPKMAIPAFVW

Sequences:

>Translated_295_residues
MTSPVAAPFFAPGLSAFAKEYDAFIIDLWGVIHDGTQAYPGAAAALAALKAQGKRTVLLTNAPRLSGSVIAQMEGLGLGR
ALYDAVMTSGDAVNAELLRRDDPFFQGLGQACLFVGPERDTNVLTDTGVALVTDPAKAGFVLCTGPVSFDESVADYAALL
EACAAQGLPMVCANPDRAVVREGKTVICAGALADFYAGLGQTVVSRGKPDPAIYRLALERLDLPAGARVAAIGDGVHTDM
PGARAAGVDAVFVTGGLNAELLGIRHGEAPDQAKVRALLDAHALTPKMAIPAFVW
>Mature_294_residues
TSPVAAPFFAPGLSAFAKEYDAFIIDLWGVIHDGTQAYPGAAAALAALKAQGKRTVLLTNAPRLSGSVIAQMEGLGLGRA
LYDAVMTSGDAVNAELLRRDDPFFQGLGQACLFVGPERDTNVLTDTGVALVTDPAKAGFVLCTGPVSFDESVADYAALLE
ACAAQGLPMVCANPDRAVVREGKTVICAGALADFYAGLGQTVVSRGKPDPAIYRLALERLDLPAGARVAAIGDGVHTDMP
GARAAGVDAVFVTGGLNAELLGIRHGEAPDQAKVRALLDAHALTPKMAIPAFVW

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30444; Mature: 30313

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPVAAPFFAPGLSAFAKEYDAFIIDLWGVIHDGTQAYPGAAAALAALKAQGKRTVLLT
CCCCCCCCHHHCCHHHHHHHHHHHEEEEHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEE
NAPRLSGSVIAQMEGLGLGRALYDAVMTSGDAVNAELLRRDDPFFQGLGQACLFVGPERD
CCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHCCEEEEECCCCC
TNVLTDTGVALVTDPAKAGFVLCTGPVSFDESVADYAALLEACAAQGLPMVCANPDRAVV
CCEEECCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHH
REGKTVICAGALADFYAGLGQTVVSRGKPDPAIYRLALERLDLPAGARVAAIGDGVHTDM
HCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
PGARAAGVDAVFVTGGLNAELLGIRHGEAPDQAKVRALLDAHALTPKMAIPAFVW
CCCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TSPVAAPFFAPGLSAFAKEYDAFIIDLWGVIHDGTQAYPGAAAALAALKAQGKRTVLLT
CCCCCCCHHHCCHHHHHHHHHHHEEEEHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEE
NAPRLSGSVIAQMEGLGLGRALYDAVMTSGDAVNAELLRRDDPFFQGLGQACLFVGPERD
CCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHCCEEEEECCCCC
TNVLTDTGVALVTDPAKAGFVLCTGPVSFDESVADYAALLEACAAQGLPMVCANPDRAVV
CCEEECCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHH
REGKTVICAGALADFYAGLGQTVVSRGKPDPAIYRLALERLDLPAGARVAAIGDGVHTDM
HCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
PGARAAGVDAVFVTGGLNAELLGIRHGEAPDQAKVRALLDAHALTPKMAIPAFVW
CCCCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA