| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83591852
Identifier: 83591852
GI number: 83591852
Start: 607678
End: 608043
Strand: Direct
Name: 83591852
Synonym: Rru_A0513
Alternate gene names: NA
Gene position: 607678-608043 (Clockwise)
Preceding gene: 83591848
Following gene: 83591853
Centisome position: 13.96
GC content: 63.93
Gene sequence:
>366_bases ATGAGCAAACAACGCCTTTATCATTTGTGCGCCCGTGACGCTTGGCGGGCCGCCGCCAGCCAGGGCCGTTACGAGGGTTC GGCCCTTGATCGGTCGGATGGCTTCATCCATTGCTCGACCCTTGAACAGGTCGAGGCGACCGCCAATCGCTTTTTCGCCG GGCGGACCGATCTGGTGCTTCTGACCATCAATCCGGCGCGGATCGACGGAGATCTGCGCTGGGAAGCCGCCGCGAGCCGC GACGGCGAGCTTTTCCCCCATGTCTATGGTGTTCTCCCGCTCGAAGCCGTTCTGAGCGCCGAGACGTGGCAGCCCGACCG CGATGGTCTGTTCCGGCTGTCGGTCACCGACGACACCCCCCTTTAG
Upstream 100 bases:
>100_bases GATTTTAGAATGGCCGCGTCTACAATTTTTTGAGCAACTGCGACCGCTCCCCCTTCTCGCCCCCCTGGAAAAAGCGGCGG TCCTGGTGTAGAGGTGAGGG
Downstream 100 bases:
>100_bases AGCAAATCCCCTTGCGATCTGGAACAGAGTGCGACGACGATTTGCTTCACTATCAAGATTCTAGATCCCGCGAGAGCGGC CCGTGAAACAGGCGATGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSKQRLYHLCARDAWRAAASQGRYEGSALDRSDGFIHCSTLEQVEATANRFFAGRTDLVLLTINPARIDGDLRWEAAASR DGELFPHVYGVLPLEAVLSAETWQPDRDGLFRLSVTDDTPL
Sequences:
>Translated_121_residues MSKQRLYHLCARDAWRAAASQGRYEGSALDRSDGFIHCSTLEQVEATANRFFAGRTDLVLLTINPARIDGDLRWEAAASR DGELFPHVYGVLPLEAVLSAETWQPDRDGLFRLSVTDDTPL >Mature_120_residues SKQRLYHLCARDAWRAAASQGRYEGSALDRSDGFIHCSTLEQVEATANRFFAGRTDLVLLTINPARIDGDLRWEAAASRD GELFPHVYGVLPLEAVLSAETWQPDRDGLFRLSVTDDTPL
Specific function: Unknown
COG id: COG3502
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13508; Mature: 13377
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQRLYHLCARDAWRAAASQGRYEGSALDRSDGFIHCSTLEQVEATANRFFAGRTDLVL CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCEEE LTINPARIDGDLRWEAAASRDGELFPHVYGVLPLEAVLSAETWQPDRDGLFRLSVTDDTP EEECCCEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC L C >Mature Secondary Structure SKQRLYHLCARDAWRAAASQGRYEGSALDRSDGFIHCSTLEQVEATANRFFAGRTDLVL CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCEEE LTINPARIDGDLRWEAAASRDGELFPHVYGVLPLEAVLSAETWQPDRDGLFRLSVTDDTP EEECCCEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA